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The map label for this gene is 66766943

Identifier: 66766943

GI number: 66766943

Start: 721316

End: 722323

Strand: Reverse

Name: 66766943

Synonym: XC_0604

Alternate gene names: NA

Gene position: 722323-721316 (Counterclockwise)

Preceding gene: 66766944

Following gene: 66766942

Centisome position: 14.03

GC content: 67.16

Gene sequence:

>1008_bases
GTGGGTCAGCCTGATCCTGGCCTTGGCACGCGGCGCACCTGCACAGGCATGGGTGGAACTCACAGCCACCGGACAGCACG
CATGAGCGCCACGGTGCCGATAGCGCTTGCCCGCCTGCAGCCCTGGCGCAGCGGCATGGCACTGGCCGCCGACTGGGCCG
TGATCGCGCTGTGCTTTGGCGCCGCCATGCTGTATCCACATCCGGCAGTGTATGCGTTGGCGATTGTGGTGATTGCCCGC
ACCCAGCTTGCGCTCGCGGTGATGATGCACGAGGGCGCGCACCGCCTGCTGGCGCATCGCCAGTCACGTAATGACGTGGT
GGCGCAGGCGCTGGCCGCCGGCCCGCTGTTCCTGTCGCTGTTCGCCTACCGGCAAGGGCATTTGCAGCATCACCGCGCAC
CGATGTCGCCGGATGATCCAGTGGCCATCATGTTCGGCATTGCCGACTACCCTGTCTCGCGCCGCGAGCTGGCGCTGCGA
TTGCTCCGCGATGTCACCGGCATCGGCTACGTACTCGCCATCCGTGGTGCGCTACGCAGGCGCCGTACACAACCAGCCAG
TGCGCACACCCGTACCGTGCCGCAGCGCGCGGGGCTGGTTGCCGGCACGATCCTGCTCAGCAACGGGCTGCTGTTCGGGG
CTCTCGCCGCATTTGGCCACCCGCTGCTGTACCTGGGCCTATGGCTGCTGCCGGCGCTGACGCTGCTGCAGCTGTTCGCC
CGCATCCGTGCCATCACCGAGCATGCCGGCTACGCCGCGTGCGAGGACCAGCGCCACAGCGCGCGCACCATCGTCGCGCG
CAGCTGGCAAACCTTTTTCTGCGGCCCGCATGGCATCCACTACCACATCGAACACCACCAGCATGTGCGCGTGCCGTTCT
ACCAACTGCCGGCCTTGCATCGCGGGATGCACGCGCAAAACCAGCTGCCCGCTGCAAATCTCTACCATGGCTACGGCGCC
GTGCTCAGGGACGTGAGCCGGGGTGCGCGTAGTGACGATCAGCGTTGA

Upstream 100 bases:

>100_bases
TTGCGCATGCCATCCACCACGCCTGCGACGCGTTGCGCGCAACCCCGCCCGCCGCCGGGCACGACGCGTCCACGCTGGAC
GCGCCACAGCGCCTGCAGCT

Downstream 100 bases:

>100_bases
CGCTGCAGCCTCCTCAACGCGCTGCGCTGGCGATCCCATCATGATCTGCACGCATGCAATCACCACTCCATGTCCGCACG
ACGGACCACACGCAACGTCA

Product: hypothetical protein

Products: NA

Alternate protein names: Fatty Acid Desaturase Family Protein; Fatty Acid Desaturase Family Proteiin; Fatty Acid Desaturase Domain-Containing Protein; Fatty Acid Desaturase Subfamily; Fatty Acid Desaturase Subfamily Protein

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MGQPDPGLGTRRTCTGMGGTHSHRTARMSATVPIALARLQPWRSGMALAADWAVIALCFGAAMLYPHPAVYALAIVVIAR
TQLALAVMMHEGAHRLLAHRQSRNDVVAQALAAGPLFLSLFAYRQGHLQHHRAPMSPDDPVAIMFGIADYPVSRRELALR
LLRDVTGIGYVLAIRGALRRRRTQPASAHTRTVPQRAGLVAGTILLSNGLLFGALAAFGHPLLYLGLWLLPALTLLQLFA
RIRAITEHAGYAACEDQRHSARTIVARSWQTFFCGPHGIHYHIEHHQHVRVPFYQLPALHRGMHAQNQLPAANLYHGYGA
VLRDVSRGARSDDQR

Sequences:

>Translated_335_residues
MGQPDPGLGTRRTCTGMGGTHSHRTARMSATVPIALARLQPWRSGMALAADWAVIALCFGAAMLYPHPAVYALAIVVIAR
TQLALAVMMHEGAHRLLAHRQSRNDVVAQALAAGPLFLSLFAYRQGHLQHHRAPMSPDDPVAIMFGIADYPVSRRELALR
LLRDVTGIGYVLAIRGALRRRRTQPASAHTRTVPQRAGLVAGTILLSNGLLFGALAAFGHPLLYLGLWLLPALTLLQLFA
RIRAITEHAGYAACEDQRHSARTIVARSWQTFFCGPHGIHYHIEHHQHVRVPFYQLPALHRGMHAQNQLPAANLYHGYGA
VLRDVSRGARSDDQR
>Mature_334_residues
GQPDPGLGTRRTCTGMGGTHSHRTARMSATVPIALARLQPWRSGMALAADWAVIALCFGAAMLYPHPAVYALAIVVIART
QLALAVMMHEGAHRLLAHRQSRNDVVAQALAAGPLFLSLFAYRQGHLQHHRAPMSPDDPVAIMFGIADYPVSRRELALRL
LRDVTGIGYVLAIRGALRRRRTQPASAHTRTVPQRAGLVAGTILLSNGLLFGALAAFGHPLLYLGLWLLPALTLLQLFAR
IRAITEHAGYAACEDQRHSARTIVARSWQTFFCGPHGIHYHIEHHQHVRVPFYQLPALHRGMHAQNQLPAANLYHGYGAV
LRDVSRGARSDDQR

Specific function: Unknown

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36779; Mature: 36648

Theoretical pI: Translated: 11.40; Mature: 11.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQPDPGLGTRRTCTGMGGTHSHRTARMSATVPIALARLQPWRSGMALAADWAVIALCFG
CCCCCCCCCCCCEECCCCCCCCCCCEEECCCHHHHHHHHCHHHCCCHHHHHHHHHHHHHH
AAMLYPHPAVYALAIVVIARTQLALAVMMHEGAHRLLAHRQSRNDVVAQALAAGPLFLSL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
FAYRQGHLQHHRAPMSPDDPVAIMFGIADYPVSRRELALRLLRDVTGIGYVLAIRGALRR
HHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRTQPASAHTRTVPQRAGLVAGTILLSNGLLFGALAAFGHPLLYLGLWLLPALTLLQLFA
HCCCCCCCHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
RIRAITEHAGYAACEDQRHSARTIVARSWQTFFCGPHGIHYHIEHHQHVRVPFYQLPALH
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHEEECCCCEEEEEECCCEECCCHHHHHHHH
RGMHAQNQLPAANLYHGYGAVLRDVSRGARSDDQR
HCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
GQPDPGLGTRRTCTGMGGTHSHRTARMSATVPIALARLQPWRSGMALAADWAVIALCFG
CCCCCCCCCCCEECCCCCCCCCCCEEECCCHHHHHHHHCHHHCCCHHHHHHHHHHHHHH
AAMLYPHPAVYALAIVVIARTQLALAVMMHEGAHRLLAHRQSRNDVVAQALAAGPLFLSL
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
FAYRQGHLQHHRAPMSPDDPVAIMFGIADYPVSRRELALRLLRDVTGIGYVLAIRGALRR
HHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRTQPASAHTRTVPQRAGLVAGTILLSNGLLFGALAAFGHPLLYLGLWLLPALTLLQLFA
HCCCCCCCHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
RIRAITEHAGYAACEDQRHSARTIVARSWQTFFCGPHGIHYHIEHHQHVRVPFYQLPALH
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHEEECCCCEEEEEECCCEECCCHHHHHHHH
RGMHAQNQLPAANLYHGYGAVLRDVSRGARSDDQR
HCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA