Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
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Accession | NC_007086 |
Length | 5,148,708 |
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The map label for this gene is 66766905
Identifier: 66766905
GI number: 66766905
Start: 678649
End: 679509
Strand: Reverse
Name: 66766905
Synonym: XC_0566
Alternate gene names: NA
Gene position: 679509-678649 (Counterclockwise)
Preceding gene: 66766906
Following gene: 66766904
Centisome position: 13.2
GC content: 63.07
Gene sequence:
>861_bases ATGCAGCGCTCTCACGGACACCGCATGCGCTACGCAATGGCGATCATGCTGTTCCTTGCCACCCTACCTGCGATCGGTGC GCCGACCTGCATCCCGCACTACCCGACACCGGCCACGCTGGCGGCCATGTTCGACCTGGCCCGGTCCACGCAGCAGGCGC TGGACAGGCTGGACGGTGCACGCGTCGTCCTGTTGGCACGCGGTGGCCAGGACCTGAGCCGGTATGGGCTGAAACATAGT CATCTCGCCTTCGCACTGCGCGAGGACGATGGCAACTGGCGCATCAAGCACCTGCTCAATCACTGCAAATCCGACACCTC CGAGCTCTATCGCGAAGGGCTGAGCAATTTCATTGGCGAAAGCGCGCTGCATGCGGATCTGCGCGTCGGCGTGCCCTCGC CTGAGGTGCAACAAACGCTGCAGCGCTTGTTGCAGGATCCCGGTACCCTGGCGCACGCCCTGCACACGCCGCGCTACAGC ATGATCGCCTACCCGTTTTCTACCGATTACCAGAACTCCAATCAGTGGGTGCTGGAGATACTGGCCGCCGCGCTTGCGCA ATCCGACGCACAGGCCACAGCGGTGGCGGCGCCAGTTGTGGATCGCCGTAGCGCGCAGGCCTGGCTCAAGCATGCCGATT ACCAACCCACCCGCCTGCATCTCGATTTGAGTAAACGCATTGGGGCCCGCTTCTTTGTGGCCAATGCGGCAGTGACCGAC CATCCGGCCAGCGAACGTATCTCCGGCAATTACTCGGTGATCACGGTCGAGTCGGTGTTCGACTTGCTGCAACAGCGCAA GGCGCTGCCGCAGGAGTTCTCCATTCCACGCAGCGCTGCCGCGCACGGAGCATCTCCATGA
Upstream 100 bases:
>100_bases GTACGCGAAACCGAACGGATTGCGGCGCAGGTGCGTATGCGCCTGGGCTTATGACCGGGCCAACAGCAACGCCATGACCG CACAAGGAAGATGCCCCCAG
Downstream 100 bases:
>100_bases CCTCATCCTTCCGATCCGTCAGCCTCGTGGCGCTGCTGGCGCTCAGCGCCGGCCAGCCGATGCAGGCGCAGGCCGGCCTG ACCACCATCACCCGTGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide Protein; Exported Outer Membrane Protein
Number of amino acids: Translated: 286; Mature: 286
Protein sequence:
>286_residues MQRSHGHRMRYAMAIMLFLATLPAIGAPTCIPHYPTPATLAAMFDLARSTQQALDRLDGARVVLLARGGQDLSRYGLKHS HLAFALREDDGNWRIKHLLNHCKSDTSELYREGLSNFIGESALHADLRVGVPSPEVQQTLQRLLQDPGTLAHALHTPRYS MIAYPFSTDYQNSNQWVLEILAAALAQSDAQATAVAAPVVDRRSAQAWLKHADYQPTRLHLDLSKRIGARFFVANAAVTD HPASERISGNYSVITVESVFDLLQQRKALPQEFSIPRSAAAHGASP
Sequences:
>Translated_286_residues MQRSHGHRMRYAMAIMLFLATLPAIGAPTCIPHYPTPATLAAMFDLARSTQQALDRLDGARVVLLARGGQDLSRYGLKHS HLAFALREDDGNWRIKHLLNHCKSDTSELYREGLSNFIGESALHADLRVGVPSPEVQQTLQRLLQDPGTLAHALHTPRYS MIAYPFSTDYQNSNQWVLEILAAALAQSDAQATAVAAPVVDRRSAQAWLKHADYQPTRLHLDLSKRIGARFFVANAAVTD HPASERISGNYSVITVESVFDLLQQRKALPQEFSIPRSAAAHGASP >Mature_286_residues MQRSHGHRMRYAMAIMLFLATLPAIGAPTCIPHYPTPATLAAMFDLARSTQQALDRLDGARVVLLARGGQDLSRYGLKHS HLAFALREDDGNWRIKHLLNHCKSDTSELYREGLSNFIGESALHADLRVGVPSPEVQQTLQRLLQDPGTLAHALHTPRYS MIAYPFSTDYQNSNQWVLEILAAALAQSDAQATAVAAPVVDRRSAQAWLKHADYQPTRLHLDLSKRIGARFFVANAAVTD HPASERISGNYSVITVESVFDLLQQRKALPQEFSIPRSAAAHGASP
Specific function: Unknown
COG id: COG4727
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31547; Mature: 31547
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRSHGHRMRYAMAIMLFLATLPAIGAPTCIPHYPTPATLAAMFDLARSTQQALDRLDGA CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC RVVLLARGGQDLSRYGLKHSHLAFALREDDGNWRIKHLLNHCKSDTSELYREGLSNFIGE EEEEEECCCCHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH SALHADLRVGVPSPEVQQTLQRLLQDPGTLAHALHTPRYSMIAYPFSTDYQNSNQWVLEI HHHHHHEEECCCCHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHH LAAALAQSDAQATAVAAPVVDRRSAQAWLKHADYQPTRLHLDLSKRIGARFFVANAAVTD HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCCEEEEECCCCCC HPASERISGNYSVITVESVFDLLQQRKALPQEFSIPRSAAAHGASP CCCHHHCCCCEEEEEHHHHHHHHHHHHCCCHHHCCCCHHCCCCCCC >Mature Secondary Structure MQRSHGHRMRYAMAIMLFLATLPAIGAPTCIPHYPTPATLAAMFDLARSTQQALDRLDGA CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC RVVLLARGGQDLSRYGLKHSHLAFALREDDGNWRIKHLLNHCKSDTSELYREGLSNFIGE EEEEEECCCCHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH SALHADLRVGVPSPEVQQTLQRLLQDPGTLAHALHTPRYSMIAYPFSTDYQNSNQWVLEI HHHHHHEEECCCCHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHH LAAALAQSDAQATAVAAPVVDRRSAQAWLKHADYQPTRLHLDLSKRIGARFFVANAAVTD HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHCCCEEEEECCCCCC HPASERISGNYSVITVESVFDLLQQRKALPQEFSIPRSAAAHGASP CCCHHHCCCCEEEEEHHHHHHHHHHHHCCCHHHCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA