Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
---|---|
Accession | NC_007086 |
Length | 5,148,708 |
Click here to switch to the map view.
The map label for this gene is 66766904
Identifier: 66766904
GI number: 66766904
Start: 678149
End: 678652
Strand: Reverse
Name: 66766904
Synonym: XC_0565
Alternate gene names: NA
Gene position: 678652-678149 (Counterclockwise)
Preceding gene: 66766905
Following gene: 66766903
Centisome position: 13.18
GC content: 68.45
Gene sequence:
>504_bases ATGACCTCATCCTTCCGATCCGTCAGCCTCGTGGCGCTGCTGGCGCTCAGCGCCGGCCAGCCGATGCAGGCGCAGGCCGG CCTGACCACCATCACCCGTGGCGACGCGTCTGCGATGTCGGCCATTCTGGTGATCTCCGCGCCGTACTTCGTGTCGTTGG CGCTGACGCACAGCGCAGTAGCGGGCTCGGAGGCGCTCACCCACGCGTCGAACAAGGCATCCGCCGGGCCGTTGCCCCCG ATGCGCGTGACATCGGTAGGCCCCACGCCCGATGGCGGCAGCGAGGTCCAGCTCCAGGATCCTGCGCAAGCTGCCAACAC CGCATTGCTACGTTGGCCTGTCCGCAATGACGCACCGGCTGCAGGGTTCCGCGTTGGCGAGACGGTGACCTTCCAGCCAA GCCCCGCCGGTGCGGGCTGGACCGTGCAATCGGCGCAGGGCGAGGCGCTGGCATTCGTGCCGACTGCGGAATCGGCTGCA CAGAACAGCAGCCAGGCCTGGTAA
Upstream 100 bases:
>100_bases TGATCACGGTCGAGTCGGTGTTCGACTTGCTGCAACAGCGCAAGGCGCTGCCGCAGGAGTTCTCCATTCCACGCAGCGCT GCCGCGCACGGAGCATCTCC
Downstream 100 bases:
>100_bases CACGGCCCTGGCGAATAGCGCGCTGTGAGCCTGCAACAGCACATCGCACGCATTGCCTACTGCAGCTGATCGCTGTGTGT TGGCTGTTTCGCGCCCTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MTSSFRSVSLVALLALSAGQPMQAQAGLTTITRGDASAMSAILVISAPYFVSLALTHSAVAGSEALTHASNKASAGPLPP MRVTSVGPTPDGGSEVQLQDPAQAANTALLRWPVRNDAPAAGFRVGETVTFQPSPAGAGWTVQSAQGEALAFVPTAESAA QNSSQAW
Sequences:
>Translated_167_residues MTSSFRSVSLVALLALSAGQPMQAQAGLTTITRGDASAMSAILVISAPYFVSLALTHSAVAGSEALTHASNKASAGPLPP MRVTSVGPTPDGGSEVQLQDPAQAANTALLRWPVRNDAPAAGFRVGETVTFQPSPAGAGWTVQSAQGEALAFVPTAESAA QNSSQAW >Mature_166_residues TSSFRSVSLVALLALSAGQPMQAQAGLTTITRGDASAMSAILVISAPYFVSLALTHSAVAGSEALTHASNKASAGPLPPM RVTSVGPTPDGGSEVQLQDPAQAANTALLRWPVRNDAPAAGFRVGETVTFQPSPAGAGWTVQSAQGEALAFVPTAESAAQ NSSQAW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16859; Mature: 16728
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSFRSVSLVALLALSAGQPMQAQAGLTTITRGDASAMSAILVISAPYFVSLALTHSAV CCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHEEEEEEECCHHEEEEHHHHHH AGSEALTHASNKASAGPLPPMRVTSVGPTPDGGSEVQLQDPAQAANTALLRWPVRNDAPA CCCHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCHHHHCEEEEEECCCCCCCC AGFRVGETVTFQPSPAGAGWTVQSAQGEALAFVPTAESAAQNSSQAW CCEECCCEEEECCCCCCCCEEEECCCCCEEEEEECCHHHHCCCCCCC >Mature Secondary Structure TSSFRSVSLVALLALSAGQPMQAQAGLTTITRGDASAMSAILVISAPYFVSLALTHSAV CCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHEEEEEEECCHHEEEEHHHHHH AGSEALTHASNKASAGPLPPMRVTSVGPTPDGGSEVQLQDPAQAANTALLRWPVRNDAPA CCCHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCHHHHCEEEEEECCCCCCCC AGFRVGETVTFQPSPAGAGWTVQSAQGEALAFVPTAESAAQNSSQAW CCEECCCEEEECCCCCCCCEEEECCCCCEEEEEECCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA