Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
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Accession | NC_007086 |
Length | 5,148,708 |
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The map label for this gene is yhhQ [C]
Identifier: 66766903
GI number: 66766903
Start: 677363
End: 677920
Strand: Reverse
Name: yhhQ [C]
Synonym: XC_0564
Alternate gene names: 66766903
Gene position: 677920-677363 (Counterclockwise)
Preceding gene: 66766904
Following gene: 77761096
Centisome position: 13.17
GC content: 66.49
Gene sequence:
>558_bases ATGCCTGCCGCGCCTGCTCCCACCTTTGCACCGCTCACCGTTCGCGCCCTGTTGTGGGCGGTCTCGGCCATGGGCGCAGT GGTGCTGCTGTCCAACATCCTGGTGCAGTACCCGATCAACGATTGGCTGACCTGGGGCGCATTTTCGTATCCGTTGGCGT TTCTGGTGAGCAACCTGATCAATCGGCGCTTCGGCCCACGCGCGGCGCGCACGGTGGCCTGGTGCGGCTTTGCGCTCGCG GTGGTGTTGTCGATCTGGCTGGCGACGCCACGGATCGCAATCGCGTCGTGCAGCGCGTTTATCGCTGCGCAGTTGCTGGA TATCAGCGTGTTCGATCGTCTGCGTAATGGCAACTGGTGGCGCGCGCCGATCGTGGCGACCACCTGCAGCGCCACGCTGG ATACGGCGATCTTCTGGAGCATCGCCTTTGCCGGCGCCGGCCTGCCGTGGATCAGCTGGGCGGCCGGCGATCTGGCGGTG AAGCTGGGCATGGGCGTGTTTCTGCTCGGACCGTTCCGCGCACTGCTGTGGCGGAGTGCGCCGCGCGCGAGCGGGTGA
Upstream 100 bases:
>100_bases GACCGCTGTTAGCACAGTGAAGTCTGACCAGAAGCCGCAGTAGCCCATACGCGGCGACGCACGGATAATTAGCGCCGTCC ACGACTGCTGTTGTCCCGCC
Downstream 100 bases:
>100_bases CTGCAGCACACACCTGGATCGACATGATACGGGTACGTCCTGCATCCAACGGCAGTGCATCGATCGCACACGCTCCTGAT ACGAGCCACAGCGTGGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MPAAPAPTFAPLTVRALLWAVSAMGAVVLLSNILVQYPINDWLTWGAFSYPLAFLVSNLINRRFGPRAARTVAWCGFALA VVLSIWLATPRIAIASCSAFIAAQLLDISVFDRLRNGNWWRAPIVATTCSATLDTAIFWSIAFAGAGLPWISWAAGDLAV KLGMGVFLLGPFRALLWRSAPRASG
Sequences:
>Translated_185_residues MPAAPAPTFAPLTVRALLWAVSAMGAVVLLSNILVQYPINDWLTWGAFSYPLAFLVSNLINRRFGPRAARTVAWCGFALA VVLSIWLATPRIAIASCSAFIAAQLLDISVFDRLRNGNWWRAPIVATTCSATLDTAIFWSIAFAGAGLPWISWAAGDLAV KLGMGVFLLGPFRALLWRSAPRASG >Mature_184_residues PAAPAPTFAPLTVRALLWAVSAMGAVVLLSNILVQYPINDWLTWGAFSYPLAFLVSNLINRRFGPRAARTVAWCGFALAV VLSIWLATPRIAIASCSAFIAAQLLDISVFDRLRNGNWWRAPIVATTCSATLDTAIFWSIAFAGAGLPWISWAAGDLAVK LGMGVFLLGPFRALLWRSAPRASG
Specific function: Unknown
COG id: COG1738
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yhhQ [H]
Homologues:
Organism=Escherichia coli, GI1789882, Length=193, Percent_Identity=31.6062176165803, Blast_Score=72, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003744 [H]
Pfam domain/function: PF02592 DUF165 [H]
EC number: NA
Molecular weight: Translated: 19905; Mature: 19773
Theoretical pI: Translated: 11.55; Mature: 11.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAAPAPTFAPLTVRALLWAVSAMGAVVLLSNILVQYPINDWLTWGAFSYPLAFLVSNLI CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHH NRRFGPRAARTVAWCGFALAVVLSIWLATPRIAIASCSAFIAAQLLDISVFDRLRNGNWW HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE RAPIVATTCSATLDTAIFWSIAFAGAGLPWISWAAGDLAVKLGMGVFLLGPFRALLWRSA ECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC PRASG CCCCC >Mature Secondary Structure PAAPAPTFAPLTVRALLWAVSAMGAVVLLSNILVQYPINDWLTWGAFSYPLAFLVSNLI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCHHHHHHHHHHHHHH NRRFGPRAARTVAWCGFALAVVLSIWLATPRIAIASCSAFIAAQLLDISVFDRLRNGNWW HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE RAPIVATTCSATLDTAIFWSIAFAGAGLPWISWAAGDLAVKLGMGVFLLGPFRALLWRSA ECCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCC PRASG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]