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The map label for this gene is yrdA [H]

Identifier: 66766703

GI number: 66766703

Start: 418980

End: 419540

Strand: Reverse

Name: yrdA [H]

Synonym: XC_0360

Alternate gene names: 66766703

Gene position: 419540-418980 (Counterclockwise)

Preceding gene: 66766710

Following gene: 66766702

Centisome position: 8.15

GC content: 65.95

Gene sequence:

>561_bases
TTGCCGGAGAGTGCCGTGACCCCGATTCGCCCGTTTCTGGAACACACCCCGCAGCTGGGCGCGCGCGTCTATGTCGACCC
GGCCTGCACCATCATCGGCAAGGTGCAGCTGGGCGACGACGTGTCGGTATGGCCGGGCACGGTGATTCGTGGCGACGTCA
ACTCTGTGCAGATCGGCGCGCGCACCAACGTGCAGGACGGCACCATCATCCACGTCAGCCACCACAGCCCGTTCAACAAG
GGCGGCTACCCGACCGTGATCGGCGAAGACGTCACCGTGGGCCACGGCACCATCCTGCATGCCTGCACCATCGAAGACCT
GTGCCTGATCGGCATGGGCGCCTGCGTGCTCGATAACGCCACCATCAAACGCTACGGCTTTGTCGGTGCCGGCGCGGTGG
TGGGCCCGGGCAAGGTGGTTGGCGAAGCGGAATTGTGGCTGGGCAATCCGGCCCGGCTGGCGCGCCGCCTCAGCGACCAG
GAGATCGAAAGCCTGCATTATTCGGCGCAGCATTATGTGCGGCTCAAGGACCAGTATCTGGGCGCGGCCAGCGCGGGCTG
A

Upstream 100 bases:

>100_bases
CCCGCATCCATGCCATCTGCATCCATCGCGCAGCACCGCCGCAGCAACACACACCGCACAGGTATCATCCACCTGTGCCC
GCAGTTGGCGGCACGCTAAC

Downstream 100 bases:

>100_bases
CCCGTTGTCTGCCATGTGAACGCGTGGCAAAGTCGGCGGCCTGCGGCGTGGGGACGCTGCCATCGAATGGATTCGACCTG
CATGCACACCACCGTTGTCC

Product: transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MPESAVTPIRPFLEHTPQLGARVYVDPACTIIGKVQLGDDVSVWPGTVIRGDVNSVQIGARTNVQDGTIIHVSHHSPFNK
GGYPTVIGEDVTVGHGTILHACTIEDLCLIGMGACVLDNATIKRYGFVGAGAVVGPGKVVGEAELWLGNPARLARRLSDQ
EIESLHYSAQHYVRLKDQYLGAASAG

Sequences:

>Translated_186_residues
MPESAVTPIRPFLEHTPQLGARVYVDPACTIIGKVQLGDDVSVWPGTVIRGDVNSVQIGARTNVQDGTIIHVSHHSPFNK
GGYPTVIGEDVTVGHGTILHACTIEDLCLIGMGACVLDNATIKRYGFVGAGAVVGPGKVVGEAELWLGNPARLARRLSDQ
EIESLHYSAQHYVRLKDQYLGAASAG
>Mature_185_residues
PESAVTPIRPFLEHTPQLGARVYVDPACTIIGKVQLGDDVSVWPGTVIRGDVNSVQIGARTNVQDGTIIHVSHHSPFNKG
GYPTVIGEDVTVGHGTILHACTIEDLCLIGMGACVLDNATIKRYGFVGAGAVVGPGKVVGEAELWLGNPARLARRLSDQE
IESLHYSAQHYVRLKDQYLGAASAG

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=172, Percent_Identity=50, Blast_Score=182, Evalue=2e-47,
Organism=Escherichia coli, GI1787667, Length=150, Percent_Identity=36.6666666666667, Blast_Score=91, Evalue=4e-20,
Organism=Escherichia coli, GI87081681, Length=155, Percent_Identity=33.5483870967742, Blast_Score=85, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19735; Mature: 19604

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPESAVTPIRPFLEHTPQLGARVYVDPACTIIGKVQLGDDVSVWPGTVIRGDVNSVQIGA
CCCCCCCCCHHHHHCCCCCCCEEEECCCEEEEEEEEECCCCCCCCCEEEECCCCEEEECC
RTNVQDGTIIHVSHHSPFNKGGYPTVIGEDVTVGHGTILHACTIEDLCLIGMGACVLDNA
CCCCCCCEEEEEECCCCCCCCCCCEEECCCEEECCCCEEEEECHHHHHHHCCCHHEECCC
TIKRYGFVGAGAVVGPGKVVGEAELWLGNPARLARRLSDQEIESLHYSAQHYVRLKDQYL
EEEEECCEECCCEECCCCEECCEEEEECCHHHHHHHCCHHHHHHHHHCHHHEEEEHHHHC
GAASAG
CCCCCC
>Mature Secondary Structure 
PESAVTPIRPFLEHTPQLGARVYVDPACTIIGKVQLGDDVSVWPGTVIRGDVNSVQIGA
CCCCCCCCHHHHHCCCCCCCEEEECCCEEEEEEEEECCCCCCCCCEEEECCCCEEEECC
RTNVQDGTIIHVSHHSPFNKGGYPTVIGEDVTVGHGTILHACTIEDLCLIGMGACVLDNA
CCCCCCCEEEEEECCCCCCCCCCCEEECCCEEECCCCEEEEECHHHHHHHCCCHHEECCC
TIKRYGFVGAGAVVGPGKVVGEAELWLGNPARLARRLSDQEIESLHYSAQHYVRLKDQYL
EEEEECCEECCCEECCCCEECCEEEEECCHHHHHHHCCHHHHHHHHHCHHHEEEEHHHHC
GAASAG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]