| Definition | Xanthomonas campestris pv. campestris str. 8004 chromosome, complete genome. |
|---|---|
| Accession | NC_007086 |
| Length | 5,148,708 |
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The map label for this gene is 66766659
Identifier: 66766659
GI number: 66766659
Start: 373331
End: 374215
Strand: Reverse
Name: 66766659
Synonym: XC_0315
Alternate gene names: NA
Gene position: 374215-373331 (Counterclockwise)
Preceding gene: 66766660
Following gene: 66766658
Centisome position: 7.27
GC content: 65.54
Gene sequence:
>885_bases ATGGCCCGCACCACCGGCACGTTGGGCATGCCAGACACCCTGGCCGACGATGCCGCACGGCTGTTCACCGGTGCCCGCAC GCAGACCGCGCTGGATGTGGGCGTGACCAACTGGACCGCCGGCTTCAACTACGACCTCACCCCGATTGTCGGTGTCTACG GCCGCGCCTCGCGTGCGCACCGCGCGCCCAGCGAGGGCGCCAACGAAGGCAACGTCAACATTCCCACCGCCGAGCAGTAC GAGCTGGGCACCAAGCTCAACTTCGCCACGCTGGATGTGTTCGCCACGGCCTTCTACACCAAGTACGACCCGTACAACAT CGGCACCAGCGCGGTGAATCCGTTGACTGGTGCGGCCGAGTCCAAGGATTACCGTGGCAGCGTCACCAACCCGGGCGTGG AAGTGGCCGCGGTGTGGACGCCAGCGCAGTGGCTGCGCCTGGATGCCAATGTCACCTACAACGACACCAAGGTCTCCGAC CTGACCGAAGTGGTGGCCAACGGCGCGGTGGCGGTGGTCGATGTGGACGGCAACATGCCCAACCGCCAGCCCAAGCTCTA TGGCAACGTCGGGCCCACGCTGCTGTTCAGCACCGGCGCATTCGATTGGGATACCTCGCTGCGCTACGCCTACGTGGGCA AGCGCTACGCCGACCTGGAAAACACCACCGAACTGGCCGCCTATCACACGCTGGCGGCCAACATCCTGGTGCGCAACGGG CCGTGGGATGTGCAGCTGGCGGTGGACAATCTCACCAACGCCTTTGCGCTGACCGAAGGCAACCCGCGCACCGATACCAT CTCCGGGCAAGGCACGCGCGAACCCATCTACGGGCGGCCGATCTACGAGCGCAACACCCGGCTGGTGGTGACCTACCACT TCTGA
Upstream 100 bases:
>100_bases CATGCTGGCGCCCTACATCGCCGATACCTGGCAGGTGACCGACAAGCTGCGCCTGGAAGGCGGCGTGCGCCACGAGCGCT ATCGCTACCGCGCCTGAGCC
Downstream 100 bases:
>100_bases GCACGCCGGCCACCGCCGCTTTCGCGTGCGCCGCGGCCCTGCCCGGCGCGCGCCCGACCAGGATTCTTATGAAGCCTTCC CTGCTTGCTGCGGCCGTCCT
Product: TonB-dependent receptor
Products: NA
Alternate protein names: NB-Dependent Receptor Plug; Nb-Dependent Outer Membrane Receptor Protein
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MARTTGTLGMPDTLADDAARLFTGARTQTALDVGVTNWTAGFNYDLTPIVGVYGRASRAHRAPSEGANEGNVNIPTAEQY ELGTKLNFATLDVFATAFYTKYDPYNIGTSAVNPLTGAAESKDYRGSVTNPGVEVAAVWTPAQWLRLDANVTYNDTKVSD LTEVVANGAVAVVDVDGNMPNRQPKLYGNVGPTLLFSTGAFDWDTSLRYAYVGKRYADLENTTELAAYHTLAANILVRNG PWDVQLAVDNLTNAFALTEGNPRTDTISGQGTREPIYGRPIYERNTRLVVTYHF
Sequences:
>Translated_294_residues MARTTGTLGMPDTLADDAARLFTGARTQTALDVGVTNWTAGFNYDLTPIVGVYGRASRAHRAPSEGANEGNVNIPTAEQY ELGTKLNFATLDVFATAFYTKYDPYNIGTSAVNPLTGAAESKDYRGSVTNPGVEVAAVWTPAQWLRLDANVTYNDTKVSD LTEVVANGAVAVVDVDGNMPNRQPKLYGNVGPTLLFSTGAFDWDTSLRYAYVGKRYADLENTTELAAYHTLAANILVRNG PWDVQLAVDNLTNAFALTEGNPRTDTISGQGTREPIYGRPIYERNTRLVVTYHF >Mature_293_residues ARTTGTLGMPDTLADDAARLFTGARTQTALDVGVTNWTAGFNYDLTPIVGVYGRASRAHRAPSEGANEGNVNIPTAEQYE LGTKLNFATLDVFATAFYTKYDPYNIGTSAVNPLTGAAESKDYRGSVTNPGVEVAAVWTPAQWLRLDANVTYNDTKVSDL TEVVANGAVAVVDVDGNMPNRQPKLYGNVGPTLLFSTGAFDWDTSLRYAYVGKRYADLENTTELAAYHTLAANILVRNGP WDVQLAVDNLTNAFALTEGNPRTDTISGQGTREPIYGRPIYERNTRLVVTYHF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31908; Mature: 31776
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTTGTLGMPDTLADDAARLFTGARTQTALDVGVTNWTAGFNYDLTPIVGVYGRASRAH CCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCEEECCCCCCCCHHHCCCCCCHHHC RAPSEGANEGNVNIPTAEQYELGTKLNFATLDVFATAFYTKYDPYNIGTSAVNPLTGAAE CCCCCCCCCCCEECCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC SKDYRGSVTNPGVEVAAVWTPAQWLRLDANVTYNDTKVSDLTEVVANGAVAVVDVDGNMP CCCCCCCCCCCCEEEEEEECCHHHEEEECCEEECCCCHHHHHHHHHCCCEEEEECCCCCC NRQPKLYGNVGPTLLFSTGAFDWDTSLRYAYVGKRYADLENTTELAAYHTLAANILVRNG CCCCEEECCCCCEEEEECCCCCCCCCEEEEECCCCHHCCCCHHHHHHHHEEEEEEEEECC PWDVQLAVDNLTNAFALTEGNPRTDTISGQGTREPIYGRPIYERNTRLVVTYHF CCEEEEEECCCCCEEEEECCCCCCCEECCCCCCCCCCCCCEEECCCEEEEEEEC >Mature Secondary Structure ARTTGTLGMPDTLADDAARLFTGARTQTALDVGVTNWTAGFNYDLTPIVGVYGRASRAH CCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCEEECCCCCCCCHHHCCCCCCHHHC RAPSEGANEGNVNIPTAEQYELGTKLNFATLDVFATAFYTKYDPYNIGTSAVNPLTGAAE CCCCCCCCCCCEECCCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC SKDYRGSVTNPGVEVAAVWTPAQWLRLDANVTYNDTKVSDLTEVVANGAVAVVDVDGNMP CCCCCCCCCCCCEEEEEEECCHHHEEEECCEEECCCCHHHHHHHHHCCCEEEEECCCCCC NRQPKLYGNVGPTLLFSTGAFDWDTSLRYAYVGKRYADLENTTELAAYHTLAANILVRNG CCCCEEECCCCCEEEEECCCCCCCCCEEEEECCCCHHCCCCHHHHHHHHEEEEEEEEECC PWDVQLAVDNLTNAFALTEGNPRTDTISGQGTREPIYGRPIYERNTRLVVTYHF CCEEEEEECCCCCEEEEECCCCCCCEECCCCCCCCCCCCCEEECCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA