Click here to switch to the map view.

The map label for this gene is 66766441

Identifier: 66766441

GI number: 66766441

Start: 107185

End: 108081

Strand: Reverse

Name: 66766441

Synonym: XC_0091

Alternate gene names: NA

Gene position: 108081-107185 (Counterclockwise)

Preceding gene: 66766442

Following gene: 66766440

Centisome position: 2.1

GC content: 73.47

Gene sequence:

>897_bases
GTGAGCATCGACGTGCCGGCCCTGATTCCCGCCGCGCTGCGCAGCCGCCTGCGTGGCCTGCAGTTGCACGCGCGCAACGC
GCAGGGCCAGCAGGGCATCGGCCAGCACGCCAGCCGCAGCCGCGGTGCCGGGCTGGAATTTGCCCAGTACCGCGCCTACG
AACCCGGCGACGCGCTGCGCCAGATCGACTGGAAACTCTACGCACGCTCGGACCGTTTCTTTGTGCGCGAAGCCGAGCGC
GAGAGCCCGCTCACGCTCTGGCTGTTGCTCGACGCCACCGCCTCCGCCGGCCAGGCCGATCAGGCGCGCCCGGGCAGCAC
GCGCCTGCAGGCGATGGCCACACTGGCCGCCTGCGCGGCCGAAGTGGCGCTGCGCCAGGGCGACCAGGTCGGCCTGTTTG
CGGTGCATGGCGGCGGGCTGGTGGCGGTGCCGGCCGGCGGCGGGCCGCGTCAACGCGACCGGCTGTGGCTGGCCTTGCAC
GGGCTGCGGGCCGGCGGCGCCTGGCCGGGCATGGACGCGCTGCGCCCGCTGTGGGAACGCATCGCCGCGCATGCGCTGGT
GCTGTCGATCGGCGATGGCTTCGACGATGCCTTGCTGGAGGCACTGGAAAAACTCGCCGCCGCACGCCGCGACGTGCTGC
AGCTGCAGGTGCTGACCTGCGACGAGCGCGACTTCCCCTTCGACGGCGGGCACCGCTTCCGCGACCCGGAGACCGGCGAG
GAACTGCTGGGCGATGGCGCGGCCATGCGCGCGGACTACCTGCAGCGCTTCGATCAGGCACAGCGCGCGCGGCAGGCGCG
CTGGCACGCCGCCGGCATTGCACACGCCGTGCATTACCTGGATGCGCCGCCGGACATGGCCCTGCGGCAGCTGTTCGCGC
GCGAGGCGCGGCGATGA

Upstream 100 bases:

>100_bases
CTGCTGTCGTTCGCCGCCGAGGCCGAACAACGCAGCGCCGACGATGTCATCGCCGCGCTGCTGCGCGCCGTGCCGTACCC
CGCGTAAGGCATCCACACGC

Downstream 100 bases:

>100_bases
GGCACGGCTGCGTTCTCGCCAGTGCAATGCGGCGGCGTGGTGCGGCATGCGTCAACGCTGCCGGTGCGCATGACATGCAT
GACGTCCGCACGCCATCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MSIDVPALIPAALRSRLRGLQLHARNAQGQQGIGQHASRSRGAGLEFAQYRAYEPGDALRQIDWKLYARSDRFFVREAER
ESPLTLWLLLDATASAGQADQARPGSTRLQAMATLAACAAEVALRQGDQVGLFAVHGGGLVAVPAGGGPRQRDRLWLALH
GLRAGGAWPGMDALRPLWERIAAHALVLSIGDGFDDALLEALEKLAAARRDVLQLQVLTCDERDFPFDGGHRFRDPETGE
ELLGDGAAMRADYLQRFDQAQRARQARWHAAGIAHAVHYLDAPPDMALRQLFAREARR

Sequences:

>Translated_298_residues
MSIDVPALIPAALRSRLRGLQLHARNAQGQQGIGQHASRSRGAGLEFAQYRAYEPGDALRQIDWKLYARSDRFFVREAER
ESPLTLWLLLDATASAGQADQARPGSTRLQAMATLAACAAEVALRQGDQVGLFAVHGGGLVAVPAGGGPRQRDRLWLALH
GLRAGGAWPGMDALRPLWERIAAHALVLSIGDGFDDALLEALEKLAAARRDVLQLQVLTCDERDFPFDGGHRFRDPETGE
ELLGDGAAMRADYLQRFDQAQRARQARWHAAGIAHAVHYLDAPPDMALRQLFAREARR
>Mature_297_residues
SIDVPALIPAALRSRLRGLQLHARNAQGQQGIGQHASRSRGAGLEFAQYRAYEPGDALRQIDWKLYARSDRFFVREAERE
SPLTLWLLLDATASAGQADQARPGSTRLQAMATLAACAAEVALRQGDQVGLFAVHGGGLVAVPAGGGPRQRDRLWLALHG
LRAGGAWPGMDALRPLWERIAAHALVLSIGDGFDDALLEALEKLAAARRDVLQLQVLTCDERDFPFDGGHRFRDPETGEE
LLGDGAAMRADYLQRFDQAQRARQARWHAAGIAHAVHYLDAPPDMALRQLFAREARR

Specific function: Unknown

COG id: COG1721

COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32629; Mature: 32498

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIDVPALIPAALRSRLRGLQLHARNAQGQQGIGQHASRSRGAGLEFAQYRAYEPGDALR
CCCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHCCCCCCHHHH
QIDWKLYARSDRFFVREAERESPLTLWLLLDATASAGQADQARPGSTRLQAMATLAACAA
HHHHHEEECCCCCEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
EVALRQGDQVGLFAVHGGGLVAVPAGGGPRQRDRLWLALHGLRAGGAWPGMDALRPLWER
HHHHHCCCCEEEEEEECCCEEEECCCCCCCHHHHEEEEEECCCCCCCCCCHHHHHHHHHH
IAAHALVLSIGDGFDDALLEALEKLAAARRDVLQLQVLTCDERDFPFDGGHRFRDPETGE
HHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCHH
ELLGDGAAMRADYLQRFDQAQRARQARWHAAGIAHAVHYLDAPPDMALRQLFAREARR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SIDVPALIPAALRSRLRGLQLHARNAQGQQGIGQHASRSRGAGLEFAQYRAYEPGDALR
CCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCHHHHCCCCCCCCHHHHCCCCCCHHHH
QIDWKLYARSDRFFVREAERESPLTLWLLLDATASAGQADQARPGSTRLQAMATLAACAA
HHHHHEEECCCCCEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH
EVALRQGDQVGLFAVHGGGLVAVPAGGGPRQRDRLWLALHGLRAGGAWPGMDALRPLWER
HHHHHCCCCEEEEEEECCCEEEECCCCCCCHHHHEEEEEECCCCCCCCCCHHHHHHHHHH
IAAHALVLSIGDGFDDALLEALEKLAAARRDVLQLQVLTCDERDFPFDGGHRFRDPETGE
HHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCHH
ELLGDGAAMRADYLQRFDQAQRARQARWHAAGIAHAVHYLDAPPDMALRQLFAREARR
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA