Click here to switch to the map view.

The map label for this gene is 66766439

Identifier: 66766439

GI number: 66766439

Start: 103594

End: 105936

Strand: Reverse

Name: 66766439

Synonym: XC_0089

Alternate gene names: NA

Gene position: 105936-103594 (Counterclockwise)

Preceding gene: 66766440

Following gene: 66766438

Centisome position: 2.06

GC content: 74.52

Gene sequence:

>2343_bases
GTGGCTGATCGGCCTGGTGCTGCTGCTGTTCGGTATCGAACGCTGGCTGGCCACCGGCCCGCGCCGGGGGAGGGCGGCAT
GAGCACGCCCGCACTGCAACGCGCTTGGCAGGCGGCACGGAGGCGGCGCGCGGCAGCGGTGCTGCTGTTCTGGTTGCCGT
TGGCGCTGCTGCCGGCGCTGCTGAGCTGGCGGCTGGGCGCCGGCACAGCTGCTTGGCTGGTGCTGCTGGCGAGCGTGGCC
GCGCTGGCCGTGGCGGCCTGGCAAGCCGCGCGGCGGCTGGACCAGGCCTGGCTGATCCGCCGCCTGAACCAGGCGCCGGA
CCTGGACGACAGCAGCGACCTGCTATTCGCCACGCCCGCCGCGCTGGGCCCCTTGCAGACCTTGCAACGCCAGCGCCTGG
AGCAGCGCCTGCACGCCCGCCCGCGCGACCTGCGCCCGGCCTGGCCCTGGCATTGGTGGCCGTGGGCCCTGCTCGGCGTG
CTGGCCGGCGTCGCGGTGCTGGTGTGGCCACAGCCCAGCGCGCCCGCCGCGCCCACCACCGACCCAGTCGCCACCGCGCG
CGCCGCAGCCGGCAAACCCGCCCTGCGCCAGGCCCGGCTGCGCAGCACGCCGCCGGCCTACACCGGGTTGCCGCCGGCCG
AGCTGCCGGAGCTGGATGGCCGCGTCCCGGCCGGCACCCGGCTGCAATGGCAGCTGCAGGTGCAGCCGGCGCCGCGCACG
GTGGCGCTGCGGCTCAACGACGGCCGCGTGCTCCCGCTGACCCGGCAGCCAGACGGCGACCACTGGCACGGCCAGCTGCT
GGCCGAGCGCCCCACGCTGTACCGCATCCTCATCGACGGCCAGCCGGCCGACCGCCGCCTGCACCGGCTCGACGTGGTAC
CCGACCGCCCACCGCAGGTGCGCGTGCTGGCGCCCGAACAGAGCCTGGTGCTGTGGACGCCGGCCAATGGTGCCTGGACG
CTGCGCTTCGAGGCCAGCGACGACTACGCCGTGGCTGCCGGCGCCGAGTTGCGCCTGACCCTGGCGCAGGGCAGCGGCGA
GAACATCACCTTCCGCACCGAGCGCCGCCCGCTCACCGGCAGCGGCCCGGCCACCCGGCGCAGCTTCGTGGCCACGCTGC
AGCCGCAGGCGCTGGGCATGGCCGCCGGCGATGACCTGATCGCCCAGTTGGTGGTGCGCGACACCCGCCAACCCGCCCCG
CAGGAAGGCCGCAGCGCCAGCGTGATCCTGCGCTGGCCGCCGCCCCAGCAGACCCAGGCCGCCGGGCTGGAGGCCAGCGT
CAAGCAGACCTTGCCCGCGTATTTCCGCAGCCAGCGCCAGATCATCATCGACGCCGAGGCGCTGCTGAAAGACAAACCCC
GCCTGGATGCGGCCACCTACCTCAAGCGTTCAGACGCCATCGGCGTGGACCAGCGCCTGCTGCGGCTGCGCTACGGCCAG
TTCCTGGGCGAAGAGAGCGAAGGCGCGCCCAAGGGGCCACCCACTGCCGATGAGCCGCCCACCAGCGACGCGCCAGCCGA
CGACCTGCCTACGGCCGACATGCCCACCGCCGATGCACCGGCACCGCCCGTCGAGCACGCACATGCCGAGCACACAGCCA
AGGCCACCGCTGAGGCTCACGATGATCACGACCATCCACCCGGCGCAGCCGCGCTGGACCCACACGATCATGACCACGAC
GACGCGCAGCCGGCGCGCGGCGGGTTTGGTCAGGAACAGGACGTGCTGACCGAGTTCGGCCACACCCACGACCACGCCGA
AGCAGCCACCCTGCTGGACCCGCAGACCCGCGCCCTGCTGCGCGCCGCGCTGGACCAGATGTGGCAATCCGAAGGCGAGC
TGCGCCAGGGCCACCCCGAGCGCGCGCTGCCGTACGCCAACAAGGCATTGGGTTTCATCAAGCAGGTGCAGCAGGCCGAG
CGCATCTACCTGGCGCGGGTGGGCCCGGAGCTGCCGCCGATCGACCCGAGCCGGCGCATGACCGGCAAGCGCGATGGCCT
GGGCGACCGCCCCGCCGCGCTCGACACCCGCCCGCCAACGGACCCCACCGCGTTGGCACTGTGGAGCGCCTTGGACGAAG
ACGGCGCGGTGCCCGACGCGCTGCTCGACCGTTACGCGCGCTGGCTGCAGACCGCACAGGACCAGTTGCCCGACCCGCTC
AGCCTGGCCGCCGCGGTGGAGACCCTGCGCAGCGAACCGGCCTGCCGCGCGTGCCGGGCGCAGCTGCGCGCCCTGGTGTG
GCGCACGGTCACCGCGCCGCCGGCCCAGGTGCACCGCCGCCCGGCCGCGGACGCGCGCGGCCAGCGGTACCTGGATGCCC
TGCGCGAGGCGCCACAGCCATGA

Upstream 100 bases:

>100_bases
TGCAACCGCGTCCCACCCCGCAGCGCGCGGTGGCGCAGGCCGTGCGCCCCCTGCGTGGCCCGGCCATCCGCCTGAGCATC
GACCCACAGCCGCTGGCGCC

Downstream 100 bases:

>100_bases
CCGCTGCCGTGCCGCCGATGATTGCCGCATCCCGTTCCCGCAGGTCCTGGTTCTGCCGAGCACACGGCAGCATTCCGCCG
CGCGGGTTGCACCGCTCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 780; Mature: 779

Protein sequence:

>780_residues
MADRPGAAAVRYRTLAGHRPAPGEGGMSTPALQRAWQAARRRRAAAVLLFWLPLALLPALLSWRLGAGTAAWLVLLASVA
ALAVAAWQAARRLDQAWLIRRLNQAPDLDDSSDLLFATPAALGPLQTLQRQRLEQRLHARPRDLRPAWPWHWWPWALLGV
LAGVAVLVWPQPSAPAAPTTDPVATARAAAGKPALRQARLRSTPPAYTGLPPAELPELDGRVPAGTRLQWQLQVQPAPRT
VALRLNDGRVLPLTRQPDGDHWHGQLLAERPTLYRILIDGQPADRRLHRLDVVPDRPPQVRVLAPEQSLVLWTPANGAWT
LRFEASDDYAVAAGAELRLTLAQGSGENITFRTERRPLTGSGPATRRSFVATLQPQALGMAAGDDLIAQLVVRDTRQPAP
QEGRSASVILRWPPPQQTQAAGLEASVKQTLPAYFRSQRQIIIDAEALLKDKPRLDAATYLKRSDAIGVDQRLLRLRYGQ
FLGEESEGAPKGPPTADEPPTSDAPADDLPTADMPTADAPAPPVEHAHAEHTAKATAEAHDDHDHPPGAAALDPHDHDHD
DAQPARGGFGQEQDVLTEFGHTHDHAEAATLLDPQTRALLRAALDQMWQSEGELRQGHPERALPYANKALGFIKQVQQAE
RIYLARVGPELPPIDPSRRMTGKRDGLGDRPAALDTRPPTDPTALALWSALDEDGAVPDALLDRYARWLQTAQDQLPDPL
SLAAAVETLRSEPACRACRAQLRALVWRTVTAPPAQVHRRPAADARGQRYLDALREAPQP

Sequences:

>Translated_780_residues
MADRPGAAAVRYRTLAGHRPAPGEGGMSTPALQRAWQAARRRRAAAVLLFWLPLALLPALLSWRLGAGTAAWLVLLASVA
ALAVAAWQAARRLDQAWLIRRLNQAPDLDDSSDLLFATPAALGPLQTLQRQRLEQRLHARPRDLRPAWPWHWWPWALLGV
LAGVAVLVWPQPSAPAAPTTDPVATARAAAGKPALRQARLRSTPPAYTGLPPAELPELDGRVPAGTRLQWQLQVQPAPRT
VALRLNDGRVLPLTRQPDGDHWHGQLLAERPTLYRILIDGQPADRRLHRLDVVPDRPPQVRVLAPEQSLVLWTPANGAWT
LRFEASDDYAVAAGAELRLTLAQGSGENITFRTERRPLTGSGPATRRSFVATLQPQALGMAAGDDLIAQLVVRDTRQPAP
QEGRSASVILRWPPPQQTQAAGLEASVKQTLPAYFRSQRQIIIDAEALLKDKPRLDAATYLKRSDAIGVDQRLLRLRYGQ
FLGEESEGAPKGPPTADEPPTSDAPADDLPTADMPTADAPAPPVEHAHAEHTAKATAEAHDDHDHPPGAAALDPHDHDHD
DAQPARGGFGQEQDVLTEFGHTHDHAEAATLLDPQTRALLRAALDQMWQSEGELRQGHPERALPYANKALGFIKQVQQAE
RIYLARVGPELPPIDPSRRMTGKRDGLGDRPAALDTRPPTDPTALALWSALDEDGAVPDALLDRYARWLQTAQDQLPDPL
SLAAAVETLRSEPACRACRAQLRALVWRTVTAPPAQVHRRPAADARGQRYLDALREAPQP
>Mature_779_residues
ADRPGAAAVRYRTLAGHRPAPGEGGMSTPALQRAWQAARRRRAAAVLLFWLPLALLPALLSWRLGAGTAAWLVLLASVAA
LAVAAWQAARRLDQAWLIRRLNQAPDLDDSSDLLFATPAALGPLQTLQRQRLEQRLHARPRDLRPAWPWHWWPWALLGVL
AGVAVLVWPQPSAPAAPTTDPVATARAAAGKPALRQARLRSTPPAYTGLPPAELPELDGRVPAGTRLQWQLQVQPAPRTV
ALRLNDGRVLPLTRQPDGDHWHGQLLAERPTLYRILIDGQPADRRLHRLDVVPDRPPQVRVLAPEQSLVLWTPANGAWTL
RFEASDDYAVAAGAELRLTLAQGSGENITFRTERRPLTGSGPATRRSFVATLQPQALGMAAGDDLIAQLVVRDTRQPAPQ
EGRSASVILRWPPPQQTQAAGLEASVKQTLPAYFRSQRQIIIDAEALLKDKPRLDAATYLKRSDAIGVDQRLLRLRYGQF
LGEESEGAPKGPPTADEPPTSDAPADDLPTADMPTADAPAPPVEHAHAEHTAKATAEAHDDHDHPPGAAALDPHDHDHDD
AQPARGGFGQEQDVLTEFGHTHDHAEAATLLDPQTRALLRAALDQMWQSEGELRQGHPERALPYANKALGFIKQVQQAER
IYLARVGPELPPIDPSRRMTGKRDGLGDRPAALDTRPPTDPTALALWSALDEDGAVPDALLDRYARWLQTAQDQLPDPLS
LAAAVETLRSEPACRACRAQLRALVWRTVTAPPAQVHRRPAADARGQRYLDALREAPQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85075; Mature: 84944

Theoretical pI: Translated: 7.94; Mature: 7.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADRPGAAAVRYRTLAGHRPAPGEGGMSTPALQRAWQAARRRRAAAVLLFWLPLALLPAL
CCCCCCCHHEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSWRLGAGTAAWLVLLASVAALAVAAWQAARRLDQAWLIRRLNQAPDLDDSSDLLFATPA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCH
ALGPLQTLQRQRLEQRLHARPRDLRPAWPWHWWPWALLGVLAGVAVLVWPQPSAPAAPTT
HHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCC
DPVATARAAAGKPALRQARLRSTPPAYTGLPPAELPELDGRVPAGTRLQWQLQVQPAPRT
CCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCE
VALRLNDGRVLPLTRQPDGDHWHGQLLAERPTLYRILIDGQPADRRLHRLDVVPDRPPQV
EEEEECCCEEEEECCCCCCCCCCCHHEECCCEEEEEEECCCCHHHHHHHCCCCCCCCCCE
RVLAPEQSLVLWTPANGAWTLRFEASDDYAVAAGAELRLTLAQGSGENITFRTERRPLTG
EEECCCCCEEEEECCCCEEEEEEECCCCEEEECCCEEEEEEECCCCCEEEEEECCCCCCC
SGPATRRSFVATLQPQALGMAAGDDLIAQLVVRDTRQPAPQEGRSASVILRWPPPQQTQA
CCCHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHH
AGLEASVKQTLPAYFRSQRQIIIDAEALLKDKPRLDAATYLKRSDAIGVDQRLLRLRYGQ
CCCHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHH
FLGEESEGAPKGPPTADEPPTSDAPADDLPTADMPTADAPAPPVEHAHAEHTAKATAEAH
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
DDHDHPPGAAALDPHDHDHDDAQPARGGFGQEQDVLTEFGHTHDHAEAATLLDPQTRALL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCHHHHHHH
RAALDQMWQSEGELRQGHPERALPYANKALGFIKQVQQAERIYLARVGPELPPIDPSRRM
HHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEHHHCCCCCCCCCCCCCC
TGKRDGLGDRPAALDTRPPTDPTALALWSALDEDGAVPDALLDRYARWLQTAQDQLPDPL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHH
SLAAAVETLRSEPACRACRAQLRALVWRTVTAPPAQVHRRPAADARGQRYLDALREAPQP
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
ADRPGAAAVRYRTLAGHRPAPGEGGMSTPALQRAWQAARRRRAAAVLLFWLPLALLPAL
CCCCCCHHEEEHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSWRLGAGTAAWLVLLASVAALAVAAWQAARRLDQAWLIRRLNQAPDLDDSSDLLFATPA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCH
ALGPLQTLQRQRLEQRLHARPRDLRPAWPWHWWPWALLGVLAGVAVLVWPQPSAPAAPTT
HHCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCC
DPVATARAAAGKPALRQARLRSTPPAYTGLPPAELPELDGRVPAGTRLQWQLQVQPAPRT
CCHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCE
VALRLNDGRVLPLTRQPDGDHWHGQLLAERPTLYRILIDGQPADRRLHRLDVVPDRPPQV
EEEEECCCEEEEECCCCCCCCCCCHHEECCCEEEEEEECCCCHHHHHHHCCCCCCCCCCE
RVLAPEQSLVLWTPANGAWTLRFEASDDYAVAAGAELRLTLAQGSGENITFRTERRPLTG
EEECCCCCEEEEECCCCEEEEEEECCCCEEEECCCEEEEEEECCCCCEEEEEECCCCCCC
SGPATRRSFVATLQPQALGMAAGDDLIAQLVVRDTRQPAPQEGRSASVILRWPPPQQTQA
CCCHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCHHH
AGLEASVKQTLPAYFRSQRQIIIDAEALLKDKPRLDAATYLKRSDAIGVDQRLLRLRYGQ
CCCHHHHHHHHHHHHCCCCEEEEEHHHHHCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHH
FLGEESEGAPKGPPTADEPPTSDAPADDLPTADMPTADAPAPPVEHAHAEHTAKATAEAH
HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
DDHDHPPGAAALDPHDHDHDDAQPARGGFGQEQDVLTEFGHTHDHAEAATLLDPQTRALL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHCCHHHHHHH
RAALDQMWQSEGELRQGHPERALPYANKALGFIKQVQQAERIYLARVGPELPPIDPSRRM
HHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEHHHCCCCCCCCCCCCCC
TGKRDGLGDRPAALDTRPPTDPTALALWSALDEDGAVPDALLDRYARWLQTAQDQLPDPL
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHH
SLAAAVETLRSEPACRACRAQLRALVWRTVTAPPAQVHRRPAADARGQRYLDALREAPQP
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA