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The map label for this gene is 66766421

Identifier: 66766421

GI number: 66766421

Start: 85784

End: 85972

Strand: Reverse

Name: 66766421

Synonym: XC_0071

Alternate gene names: NA

Gene position: 85972-85784 (Counterclockwise)

Preceding gene: 66766422

Following gene: 66766419

Centisome position: 1.67

GC content: 62.43

Gene sequence:

>189_bases
ATGGATAAGAACCGTATCGAAGGCGCCGCCAAGCAGGTCAAGGGCTCGGTGAAGGAAGCCATCGGCCGTGTCACCGGCGA
CAAGAGCACCGAACTGGAAGGCGCCGCCGAAAAGAATATCGGCAAGGTGCAGCGCAAGGCCGGCGAACTCGCCGACGACG
TGCGCGACGCGACCAAGTCCACCAGGTAA

Upstream 100 bases:

>100_bases
CTAGTGCATTCGCATGTGTGCATCGCAGCAACAGACGCACACCATGCTCACACCGGCCCAGACAGACTGGACCGGTTCCC
CAAACTACGAGAAACGTCCC

Downstream 100 bases:

>100_bases
CTCCTTCGCTTCAGCGCTGCTGTTGCAGGTTTGGCAGGTGGTGCGCATGTCAGGTTGGTTTGGTGCGCAGTGCTGCAGCC
TGCGGGTAGTGCACAGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MDKNRIEGAAKQVKGSVKEAIGRVTGDKSTELEGAAEKNIGKVQRKAGELADDVRDATKSTR

Sequences:

>Translated_62_residues
MDKNRIEGAAKQVKGSVKEAIGRVTGDKSTELEGAAEKNIGKVQRKAGELADDVRDATKSTR
>Mature_62_residues
MDKNRIEGAAKQVKGSVKEAIGRVTGDKSTELEGAAEKNIGKVQRKAGELADDVRDATKSTR

Specific function: Unknown

COG id: COG3237

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0337 (CsbD) family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y070_XANCP (Q8PEB1)

Other databases:

- EMBL:   AE008922
- RefSeq:   NP_635465.1
- ProteinModelPortal:   Q8PEB1
- SMR:   Q8PEB1
- GeneID:   1002324
- GenomeReviews:   AE008922_GR
- KEGG:   xcc:XCC0070
- HOGENOM:   HBG704474
- OMA:   RIDGAAK
- ProtClustDB:   CLSK903361
- BioCyc:   XCAM190485:XCC0070-MONOMER
- InterPro:   IPR008462
- Gene3D:   G3DSA:1.10.1470.10

Pfam domain/function: PF05532 CsbD; SSF69047 CsbD

EC number: NA

Molecular weight: Translated: 6613; Mature: 6613

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKNRIEGAAKQVKGSVKEAIGRVTGDKSTELEGAAEKNIGKVQRKAGELADDVRDATKS
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
TR
CC
>Mature Secondary Structure
MDKNRIEGAAKQVKGSVKEAIGRVTGDKSTELEGAAEKNIGKVQRKAGELADDVRDATKS
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
TR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217