| Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
|---|---|
| Accession | NC_007005 |
| Length | 6,093,698 |
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The map label for this gene is glsA [H]
Identifier: 66045532
GI number: 66045532
Start: 2663686
End: 2664594
Strand: Direct
Name: glsA [H]
Synonym: Psyr_2292
Alternate gene names: 66045532
Gene position: 2663686-2664594 (Clockwise)
Preceding gene: 66045531
Following gene: 66045533
Centisome position: 43.71
GC content: 61.06
Gene sequence:
>909_bases ATGCAAGACCTGCTGAACGAAATCCTCGACGAAGTAAGACCCTTGCTTGGTCAGGGCAAGGTTGCCGATTACATCCCGGC ACTGGGCGAGGTCCGGCCTGATCAACTGGGCATCGCGGTGTACGGCAACGATGGCCAGGTGTTCAGCGCCGGCGACGCCG AAACGGCGTTTTCGATACAGAGCATTTCCAAGGTGTTCAGCCTGGTGCAAGCCATCAATCACTCGGGCGAGGAGATCTGG CAGCGCCTCGGGCACGAGCCTTCCGGCCAGCCGTTCAACTCGCTGGTGCAGCTCGAATTCGAGCAGGGCAGGCCACGCAA CCCGTTCATCAATGCCGGTGCGCTGGTGATCTGCGACATCAATCAGGCGCGGTTTGCAGCACCGTCGCTGTCGATGCGCG ACTTCGTTCGACGCCTGTGCGGCAATCGGGCGATCACTTCCGACTCCAAAGTCGCCGACTCCGAATACCAGCACCGTTCG CGCAATGCCGCGGCGGCCTATCTGATGAAGTCCTTCGACAATTTCCACGGCGATGTGGAAGACGTGCTGCGCAGCTACTT CCACCATTGTGCGCTGAGCATGAACTGCATCGATCTGGCCAAGGCATTCGGCTTCCTGGCGCATCAGGGCTTTTGCGCGC ACAGCGGCGAGCAGGTCCTCACTGCGCGTCAGGCCACCCAGGTCAACTCGATCATGGCCACCAGCGGCTTGTACGACGAG GCCGGCAACTTCGCTTATCGCGTAGGCCTGCCGGGCAAGAGCGGGGTTGGCGGTGGTATCGTTGCGATCGTGCCCGAGCG TGCTTCAGTCTGTGTGTGGTCCCCGGAGTTGAACGCAGCGGGCAATTCCCTTGTCGGTATGGCTGCGCTGGAAAAACTCA GCGCGAGGGTCGACTGGTCGGTCTTTTGA
Upstream 100 bases:
>100_bases GAGCGTAATGACACCGACTACAGGACCTGAGCCTGCAACGCAGTGATGCGAGGCGCTTGAGGTTGGTGTAGTGTGCGCAG CCAAAACAAGGGGCGCACAC
Downstream 100 bases:
>100_bases GGTAAAAAGCCTTCTGAAGTGAACCGCGCGTCGAAGCGCGAACCAGACAGGAGTCATGGATTGAATAGAAGGCTATGCAA ATCGCTCATGCTGAGCGTCG
Product: glutaminase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MQDLLNEILDEVRPLLGQGKVADYIPALGEVRPDQLGIAVYGNDGQVFSAGDAETAFSIQSISKVFSLVQAINHSGEEIW QRLGHEPSGQPFNSLVQLEFEQGRPRNPFINAGALVICDINQARFAAPSLSMRDFVRRLCGNRAITSDSKVADSEYQHRS RNAAAAYLMKSFDNFHGDVEDVLRSYFHHCALSMNCIDLAKAFGFLAHQGFCAHSGEQVLTARQATQVNSIMATSGLYDE AGNFAYRVGLPGKSGVGGGIVAIVPERASVCVWSPELNAAGNSLVGMAALEKLSARVDWSVF
Sequences:
>Translated_302_residues MQDLLNEILDEVRPLLGQGKVADYIPALGEVRPDQLGIAVYGNDGQVFSAGDAETAFSIQSISKVFSLVQAINHSGEEIW QRLGHEPSGQPFNSLVQLEFEQGRPRNPFINAGALVICDINQARFAAPSLSMRDFVRRLCGNRAITSDSKVADSEYQHRS RNAAAAYLMKSFDNFHGDVEDVLRSYFHHCALSMNCIDLAKAFGFLAHQGFCAHSGEQVLTARQATQVNSIMATSGLYDE AGNFAYRVGLPGKSGVGGGIVAIVPERASVCVWSPELNAAGNSLVGMAALEKLSARVDWSVF >Mature_302_residues MQDLLNEILDEVRPLLGQGKVADYIPALGEVRPDQLGIAVYGNDGQVFSAGDAETAFSIQSISKVFSLVQAINHSGEEIW QRLGHEPSGQPFNSLVQLEFEQGRPRNPFINAGALVICDINQARFAAPSLSMRDFVRRLCGNRAITSDSKVADSEYQHRS RNAAAAYLMKSFDNFHGDVEDVLRSYFHHCALSMNCIDLAKAFGFLAHQGFCAHSGEQVLTARQATQVNSIMATSGLYDE AGNFAYRVGLPGKSGVGGGIVAIVPERASVCVWSPELNAAGNSLVGMAALEKLSARVDWSVF
Specific function: Unknown
COG id: COG2066
COG function: function code E; Glutaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutaminase family [H]
Homologues:
Organism=Homo sapiens, GI156104878, Length=274, Percent_Identity=37.5912408759124, Blast_Score=173, Evalue=2e-43, Organism=Homo sapiens, GI20336214, Length=297, Percent_Identity=33.6700336700337, Blast_Score=150, Evalue=1e-36, Organism=Escherichia coli, GI1787804, Length=300, Percent_Identity=62, Blast_Score=377, Evalue=1e-106, Organism=Escherichia coli, GI1786693, Length=290, Percent_Identity=36.551724137931, Blast_Score=171, Evalue=6e-44, Organism=Caenorhabditis elegans, GI17507019, Length=302, Percent_Identity=34.4370860927152, Blast_Score=168, Evalue=3e-42, Organism=Caenorhabditis elegans, GI193204073, Length=300, Percent_Identity=33.6666666666667, Blast_Score=162, Evalue=1e-40, Organism=Caenorhabditis elegans, GI193204075, Length=302, Percent_Identity=33.4437086092715, Blast_Score=162, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17532727, Length=306, Percent_Identity=33.0065359477124, Blast_Score=161, Evalue=3e-40, Organism=Drosophila melanogaster, GI24653162, Length=285, Percent_Identity=35.0877192982456, Blast_Score=174, Evalue=9e-44, Organism=Drosophila melanogaster, GI281363241, Length=285, Percent_Identity=35.0877192982456, Blast_Score=174, Evalue=9e-44, Organism=Drosophila melanogaster, GI24653164, Length=285, Percent_Identity=35.0877192982456, Blast_Score=174, Evalue=9e-44, Organism=Drosophila melanogaster, GI281363239, Length=285, Percent_Identity=35.0877192982456, Blast_Score=173, Evalue=1e-43, Organism=Drosophila melanogaster, GI24653156, Length=285, Percent_Identity=35.0877192982456, Blast_Score=173, Evalue=1e-43, Organism=Drosophila melanogaster, GI24653158, Length=285, Percent_Identity=35.0877192982456, Blast_Score=173, Evalue=1e-43, Organism=Drosophila melanogaster, GI24653166, Length=285, Percent_Identity=35.0877192982456, Blast_Score=173, Evalue=1e-43, Organism=Drosophila melanogaster, GI116008307, Length=285, Percent_Identity=35.0877192982456, Blast_Score=173, Evalue=1e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR015868 [H]
Pfam domain/function: PF04960 Glutaminase [H]
EC number: =3.5.1.2 [H]
Molecular weight: Translated: 32683; Mature: 32683
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDLLNEILDEVRPLLGQGKVADYIPALGEVRPDQLGIAVYGNDGQVFSAGDAETAFSIQ CHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEECCCCCEEECCCCHHHHHHH SISKVFSLVQAINHSGEEIWQRLGHEPSGQPFNSLVQLEFEQGRPRNPFINAGALVICDI HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHEEEEECCCCCCCCCCCCCEEEEEEC NQARFAAPSLSMRDFVRRLCGNRAITSDSKVADSEYQHRSRNAAAAYLMKSFDNFHGDVE CHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH DVLRSYFHHCALSMNCIDLAKAFGFLAHQGFCAHSGEQVLTARQATQVNSIMATSGLYDE HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC AGNFAYRVGLPGKSGVGGGIVAIVPERASVCVWSPELNAAGNSLVGMAALEKLSARVDWS CCCEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCC VF CC >Mature Secondary Structure MQDLLNEILDEVRPLLGQGKVADYIPALGEVRPDQLGIAVYGNDGQVFSAGDAETAFSIQ CHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEECCCCCEEECCCCHHHHHHH SISKVFSLVQAINHSGEEIWQRLGHEPSGQPFNSLVQLEFEQGRPRNPFINAGALVICDI HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHEEEEECCCCCCCCCCCCCEEEEEEC NQARFAAPSLSMRDFVRRLCGNRAITSDSKVADSEYQHRSRNAAAAYLMKSFDNFHGDVE CHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH DVLRSYFHHCALSMNCIDLAKAFGFLAHQGFCAHSGEQVLTARQATQVNSIMATSGLYDE HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC AGNFAYRVGLPGKSGVGGGIVAIVPERASVCVWSPELNAAGNSLVGMAALEKLSARVDWS CCCEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCC VF CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA