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The map label for this gene is yvaQ [H]

Identifier: 66045480

GI number: 66045480

Start: 2603604

End: 2605217

Strand: Direct

Name: yvaQ [H]

Synonym: Psyr_2240

Alternate gene names: 66045480

Gene position: 2603604-2605217 (Clockwise)

Preceding gene: 66045478

Following gene: 66045481

Centisome position: 42.73

GC content: 60.1

Gene sequence:

>1614_bases
ATGTCGATAAAGCTACGTCTGTTCTTGCTGATAGGCACCAGTGTACTGACCGTCATGATCATCAGCCTGGTCAACTACCT
GGGTAACACGCGCATGGAGGCGGCGATGCTCGACAGTGAAGTCAGCATGGCTGCGCTGGGCAATCACCTGGAAGCCGACA
TGATGCATGACGCGCTGCGTGCCGATGTGCTGTCGGCGATGCTGTTTGGTCTGGGCAGGAGCAACAGCACGCGTGACGAA
GTGCAGACATCCCTGAAAGAGCATGCCGCACTGTTTCGCAAGGTCGTGAGCGATAACCTGCAACTGCCGCTCACCGATGC
CATCAAGGCGGAGCTGAGCAGGATAAAGCCAAGCCTCGACGCTTATATCAGCGCAGGCGAGCGGATTGTCGGGCTGGCCA
TCGACAGCCCGGACCGTGCGCAGCAAGAACTGGGTACGTTCTCCAGCGCCTTCACGCAACTGGAGGGGCAGATGTCGACC
TTGAGTGACCTGATCGAGGACAACTCCAAAGCCAGCGGCGAACGCACCCGTCAGACCACCCGCAGTGCCAATCTCACCTT
GGCGGTCGTGCTTTCGATCAGTATTTTGCTGCTGCTGGTCCAGGGGCATTGGGTGACGCGCAGCATCATGATCCCGCTTG
CGTCCGCCAGTCGTATTGCCGACAGCATTGCTCATGGCAACCTCAGCGAACCCATTGCCGAGTCCCGTGGCCGTGACGAA
GCCAGCATGCTGATTCGCAGCCTGGCGATCATGCAGCGTGACCTGCGCAGCATGATCGAAGTGGTGCGCAGCAATGCCAA
TGACGTCAGCGGCATGAGCCGTCAGCTCAGCAGTGGTTGCCATGAGGTGGCCGACAGCAGCCGGCAACAGAGTTCGGCAG
CTGGCACCATGTCGGCGGCGACCAGCGAGATGACCGCAAGTATCGAAGAAATCACCCGGCATGCCGGGCAGGCACTGGAA
ATGGCCAGTCAGGCCGAATCCCTGGCCAAGAACGGCGGTCGGGTGATTCATCAGGTGGTCAGTGACATGGACAGCATTGC
CCGTTCGGCACAGCAGTCGGCTCAGGTGATCCGCACGCTGGACAAGGACTCGGAAGGCATCTTCAATATTATTCAGGTCA
TCAAGGGGATTGCCGACCAGACCAACCTGCTGGCGCTCAACGCGGCCATCGAGGCTGCCCGTGCCGGCGAGCAGGGCCGT
GGTTTTGCCGTGGTGGCCGACGAGGTGCGCAGCCTGGCCGGACGCACCAGTGCTTCCACTCAGGAAATCACCGCCATGGT
TGCGCGCATCCAGCAGAGCACCCGCGAAGCGGTTACCAGCATGGAAGCCGGTGTCGCTCAGGTCGACAAGGGCATGGCGG
TGACCGCCGAAGTGGAACGTGCGATCAGCGACATCCTGGCTGCTACGTTGAGCACCACGCAGTTGGTCAACGACATCACC
CGTACCATTGGCGAGCAAAGTCTGGCCAGTAATGAAATCGCCCATCAGGTAGAAATGATTGCCAGCATGTCCGAGGGCAA
TAGCCGGGTCATCGGCCAGACCGCCAGTACCACCGACGAACTGTCGGTAATGGCCGGGCAGCTTTCACAATCGGTCGATC
GCTTTCAGCTGTGA

Upstream 100 bases:

>100_bases
TTCCGTTAAATAGGCTTAAGTATCTGGCAACGTGCGTCGATAAGCTGTTGATAAGAGCAATCCGCAGCTCGCGTTATTTC
ATTGACCGGAGGGCTACAGG

Downstream 100 bases:

>100_bases
TATCAAATTGCCCAGGTCTGCAGTACTCTGCGCCGCGAAAAGCGCCGTGAACTGCGTGGCTGAAGTTTTTCCGCCTGCGC
TGAAGGCGAACGCATTAAAG

Product: histidine kinase, HAMP region: chemotaxis sensory transducer

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 537; Mature: 536

Protein sequence:

>537_residues
MSIKLRLFLLIGTSVLTVMIISLVNYLGNTRMEAAMLDSEVSMAALGNHLEADMMHDALRADVLSAMLFGLGRSNSTRDE
VQTSLKEHAALFRKVVSDNLQLPLTDAIKAELSRIKPSLDAYISAGERIVGLAIDSPDRAQQELGTFSSAFTQLEGQMST
LSDLIEDNSKASGERTRQTTRSANLTLAVVLSISILLLLVQGHWVTRSIMIPLASASRIADSIAHGNLSEPIAESRGRDE
ASMLIRSLAIMQRDLRSMIEVVRSNANDVSGMSRQLSSGCHEVADSSRQQSSAAGTMSAATSEMTASIEEITRHAGQALE
MASQAESLAKNGGRVIHQVVSDMDSIARSAQQSAQVIRTLDKDSEGIFNIIQVIKGIADQTNLLALNAAIEAARAGEQGR
GFAVVADEVRSLAGRTSASTQEITAMVARIQQSTREAVTSMEAGVAQVDKGMAVTAEVERAISDILAATLSTTQLVNDIT
RTIGEQSLASNEIAHQVEMIASMSEGNSRVIGQTASTTDELSVMAGQLSQSVDRFQL

Sequences:

>Translated_537_residues
MSIKLRLFLLIGTSVLTVMIISLVNYLGNTRMEAAMLDSEVSMAALGNHLEADMMHDALRADVLSAMLFGLGRSNSTRDE
VQTSLKEHAALFRKVVSDNLQLPLTDAIKAELSRIKPSLDAYISAGERIVGLAIDSPDRAQQELGTFSSAFTQLEGQMST
LSDLIEDNSKASGERTRQTTRSANLTLAVVLSISILLLLVQGHWVTRSIMIPLASASRIADSIAHGNLSEPIAESRGRDE
ASMLIRSLAIMQRDLRSMIEVVRSNANDVSGMSRQLSSGCHEVADSSRQQSSAAGTMSAATSEMTASIEEITRHAGQALE
MASQAESLAKNGGRVIHQVVSDMDSIARSAQQSAQVIRTLDKDSEGIFNIIQVIKGIADQTNLLALNAAIEAARAGEQGR
GFAVVADEVRSLAGRTSASTQEITAMVARIQQSTREAVTSMEAGVAQVDKGMAVTAEVERAISDILAATLSTTQLVNDIT
RTIGEQSLASNEIAHQVEMIASMSEGNSRVIGQTASTTDELSVMAGQLSQSVDRFQL
>Mature_536_residues
SIKLRLFLLIGTSVLTVMIISLVNYLGNTRMEAAMLDSEVSMAALGNHLEADMMHDALRADVLSAMLFGLGRSNSTRDEV
QTSLKEHAALFRKVVSDNLQLPLTDAIKAELSRIKPSLDAYISAGERIVGLAIDSPDRAQQELGTFSSAFTQLEGQMSTL
SDLIEDNSKASGERTRQTTRSANLTLAVVLSISILLLLVQGHWVTRSIMIPLASASRIADSIAHGNLSEPIAESRGRDEA
SMLIRSLAIMQRDLRSMIEVVRSNANDVSGMSRQLSSGCHEVADSSRQQSSAAGTMSAATSEMTASIEEITRHAGQALEM
ASQAESLAKNGGRVIHQVVSDMDSIARSAQQSAQVIRTLDKDSEGIFNIIQVIKGIADQTNLLALNAAIEAARAGEQGRG
FAVVADEVRSLAGRTSASTQEITAMVARIQQSTREAVTSMEAGVAQVDKGMAVTAEVERAISDILAATLSTTQLVNDITR
TIGEQSLASNEIAHQVEMIASMSEGNSRVIGQTASTTDELSVMAGQLSQSVDRFQL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=363, Percent_Identity=31.404958677686, Blast_Score=150, Evalue=2e-37,
Organism=Escherichia coli, GI1788195, Length=336, Percent_Identity=33.0357142857143, Blast_Score=147, Evalue=2e-36,
Organism=Escherichia coli, GI2367378, Length=387, Percent_Identity=29.9741602067183, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1787690, Length=472, Percent_Identity=26.0593220338983, Blast_Score=139, Evalue=6e-34,
Organism=Escherichia coli, GI1789453, Length=363, Percent_Identity=27.8236914600551, Blast_Score=103, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 57333; Mature: 57202

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIKLRLFLLIGTSVLTVMIISLVNYLGNTRMEAAMLDSEVSMAALGNHLEADMMHDALR
CCEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
ADVLSAMLFGLGRSNSTRDEVQTSLKEHAALFRKVVSDNLQLPLTDAIKAELSRIKPSLD
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHH
AYISAGERIVGLAIDSPDRAQQELGTFSSAFTQLEGQMSTLSDLIEDNSKASGERTRQTT
HHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
RSANLTLAVVLSISILLLLVQGHWVTRSIMIPLASASRIADSIAHGNLSEPIAESRGRDE
HHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHH
ASMLIRSLAIMQRDLRSMIEVVRSNANDVSGMSRQLSSGCHEVADSSRQQSSAAGTMSAA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSEMTASIEEITRHAGQALEMASQAESLAKNGGRVIHQVVSDMDSIARSAQQSAQVIRTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKDSEGIFNIIQVIKGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAGRTSAST
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHCCCCCHH
QEITAMVARIQQSTREAVTSMEAGVAQVDKGMAVTAEVERAISDILAATLSTTQLVNDIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTIGEQSLASNEIAHQVEMIASMSEGNSRVIGQTASTTDELSVMAGQLSQSVDRFQL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SIKLRLFLLIGTSVLTVMIISLVNYLGNTRMEAAMLDSEVSMAALGNHLEADMMHDALR
CEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
ADVLSAMLFGLGRSNSTRDEVQTSLKEHAALFRKVVSDNLQLPLTDAIKAELSRIKPSLD
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHH
AYISAGERIVGLAIDSPDRAQQELGTFSSAFTQLEGQMSTLSDLIEDNSKASGERTRQTT
HHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
RSANLTLAVVLSISILLLLVQGHWVTRSIMIPLASASRIADSIAHGNLSEPIAESRGRDE
HHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCHH
ASMLIRSLAIMQRDLRSMIEVVRSNANDVSGMSRQLSSGCHEVADSSRQQSSAAGTMSAA
HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TSEMTASIEEITRHAGQALEMASQAESLAKNGGRVIHQVVSDMDSIARSAQQSAQVIRTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKDSEGIFNIIQVIKGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAGRTSAST
CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHCCCCCHH
QEITAMVARIQQSTREAVTSMEAGVAQVDKGMAVTAEVERAISDILAATLSTTQLVNDIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTIGEQSLASNEIAHQVEMIASMSEGNSRVIGQTASTTDELSVMAGQLSQSVDRFQL
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]