Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
---|---|
Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is ppsA [H]
Identifier: 66045330
GI number: 66045330
Start: 2437628
End: 2440003
Strand: Direct
Name: ppsA [H]
Synonym: Psyr_2090
Alternate gene names: 66045330
Gene position: 2437628-2440003 (Clockwise)
Preceding gene: 66045328
Following gene: 66045331
Centisome position: 40.0
GC content: 61.66
Gene sequence:
>2376_bases TTGGTAGAGTACGTAGTTTCCCTCGATAAGCTCGGCGTCCATGATGTAGAGCACGTGGGGGGCAAAAACTCGTCCCTCGG CGAGATGATCAGCAACCTCGCAGGTGCTGGTGTTTCGGTGCCCGGCGGCTTCGCGACTACCGCCCAGGCTTACCGTGACT TTCTCGAGCTCAGCGGCCTGAACGAGCAGATCCATGCGGCGCTGGACGCCCTTGATGTCGATGACGTCAACGCGCTGGCC CGCACGGGTGCGCAGATTCGTCAGTGGATCATGGAAGCCGAGTTCCCCGAGCAGCTCAACGCCCAGATCCGTACTGCGTT TGCCGAGCTCTCTGCCGGTAACCCGAACCTGGCCGTGGCCGTGCGCTCCTCCGCAACGGCCGAAGATTTGCCGGATGCGT CGTTCGCCGGCCAGCAGGAGACCTTCCTGAACATCCGCGGCGTCGAGAACGTGATCCGCGCGGCCAAGGAAGTCTTCGCT TCACTGTTCAACGACCGTGCGATTTCCTACCGCGTACACCAGGGCTTCGACCACAAGCTGGTCGCGCTGTCTGCGGGTGT GCAGCGCATGGTGCGCTCCGAAACCGGTACGGCCGGTGTCATGTTCACCCTCGACACCGAGTCCGGTTTCCGCGATGTGG TGTTCATCACCGGTGCCTACGGTCTGGGCGAGACGGTCGTGCAGGGCGCCGTCAACCCCGACGAATTCTACGTGCACAAG GACACGCTGGCGGCTGGTCGCCCGGCGATCCTGCGTCGCAATCTGGGCAGCAAGGCGATCAAGATGATTTACGGCGAAGA AGCCAAGGCCGGTCGTTCGGTCAAGGTGATCGACGTCGAGCCTGCCGATCGTGCACGTTTCTGTCTGAGCGATGCCGAAG TGTCCGAACTGGCCAAACAGGCGATGATCATCGAGAAGCACTACAAGTGCCCGATGGACATCGAGTGGGCCAAGGACGGT GACGACGGCAAGCTGTACATCGTCCAGGCACGTCCGGAAACGGTGAAGAGCCGTGCGTCGGCTAACGTCATGGAACGCTA TCTGCTCAAGGAGACCGGCAAGGTGCTGGTCGAAGGCCGTGCCATCGGTCAGCGCATCGGCGCGGGCAAGGTGCGTATCA TCAAGGACGTGTCCGAGATGGACAAGGTCCAGCCCGGTGACGTGCTGGTGTCGGACATGACCGACCCGGACTGGGAACCG GTGATGAAGCGTGCCAGCGCAATCGTCACCAACCGTGGCGGTCGTACCTGCCACGCCGCGATCATCGCCCGTGAGCTGGG CATCCCGGCAGTGGTCGGCTGCGGCAACGCCACGCATACCCTTCAGGATGGCCAGGGTGTCACGGTTTCCTGTGCAGAGG GCGACACCGGTTATATCTTCGAAGGCGAGCTGGGCTTCGACATCAAGACCAACTCGGTCGATGCCATGCCTGATCTGCCG TTCAAGATCATGATGAACGTCGGCAACCCGGACCGTGCCTTTGATTTCGCCCAGTTGCCCAATGCCGGTGTCGGCCTGGC GCGTCTGGAGTTCATTATCAACCGCATGATCGGCGTGCACCCCAAGGCGCTGCTCAACTATTCGGTGTTGCCACCGGAAA TCAAGGAAAGCGTCGACAAGCGCATCGCCGGTTACGACGATCCGGTCGGTTTCTATGTCGACAAGCTGGTCGAGGGCATC AGCACTCTGGCCGCCGCGTTCACGCCGAAAAAAGTCATCGTGCGCCTCTCGGACTTCAAGTCCAACGAGTACGCGAACCT GATCGGCGGCAAGCTCTACGAGCCCGAAGAAGAAAACCCGATGCTGGGCTTCCGCGGTGCGTCGCGCTATATCAGCGAGA ACTTCCGTGACTGCTTCGAGCTGGAGTGCCGTGCGCTCAAGCGTGTGCGCGAGGAGATGGGCCTGACCAACGTCGAGATC ATGGTGCCGTTCGTCCGCACCCTGGGCGAGGCGAGCCAGGTGATCGATCTGCTGGCCGCCAACGGCCTGAAGCGTGGCGA AAACGGCCTGCGCATCATCATGATGTGCGAGCTGCCGTCCAACGCGATTCTGGCGGAAGAGTTCCTCGAGTATTTCGACG GCTTCTCCATCGGCTCCAACGACCTGACTCAGCTGACGCTCGGTCTCGACCGTGACTCCGGTGTGATCGCTCACCTGTTC GACGAGCGTAACCCGGCGGTCAAGAAGCTGCTGTCCAACGCCATTCAGGCGTGCAACAAGGCCGGCAAGTACATCGGCAT CTGCGGGCAGGGGCCTTCCGATCACCCGGATCTGGCGCGCTGGCTGATGGATCAGGGCATCGAGAGTGTCTCGCTCAACC CTGATTCGGTACTGGAGACCTGGTTCTTCCTCGCCGAGGCACAGGCGCCTGTCTGA
Upstream 100 bases:
>100_bases CGATCTGTACGTCCGGGCAGACACGCCTGAAGCCACACCGCATGTGGCGCAGGTGAATGAGCTTTTCCCAACAACAAACA CAGTTAGTGGAGAGATCACC
Downstream 100 bases:
>100_bases CAGGCGGTGGCTCGCCTGAGGCGCATTCCTCGCAACACCGGGCTGCCGTGTGACGCGAACGCGGCCTGAGCCGTCATGTG GTTCAGGTGTTTGAATGAGG
Product: phosphoenolpyruvate synthase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 791; Mature: 791
Protein sequence:
>791_residues MVEYVVSLDKLGVHDVEHVGGKNSSLGEMISNLAGAGVSVPGGFATTAQAYRDFLELSGLNEQIHAALDALDVDDVNALA RTGAQIRQWIMEAEFPEQLNAQIRTAFAELSAGNPNLAVAVRSSATAEDLPDASFAGQQETFLNIRGVENVIRAAKEVFA SLFNDRAISYRVHQGFDHKLVALSAGVQRMVRSETGTAGVMFTLDTESGFRDVVFITGAYGLGETVVQGAVNPDEFYVHK DTLAAGRPAILRRNLGSKAIKMIYGEEAKAGRSVKVIDVEPADRARFCLSDAEVSELAKQAMIIEKHYKCPMDIEWAKDG DDGKLYIVQARPETVKSRASANVMERYLLKETGKVLVEGRAIGQRIGAGKVRIIKDVSEMDKVQPGDVLVSDMTDPDWEP VMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGNATHTLQDGQGVTVSCAEGDTGYIFEGELGFDIKTNSVDAMPDLP FKIMMNVGNPDRAFDFAQLPNAGVGLARLEFIINRMIGVHPKALLNYSVLPPEIKESVDKRIAGYDDPVGFYVDKLVEGI STLAAAFTPKKVIVRLSDFKSNEYANLIGGKLYEPEEENPMLGFRGASRYISENFRDCFELECRALKRVREEMGLTNVEI MVPFVRTLGEASQVIDLLAANGLKRGENGLRIIMMCELPSNAILAEEFLEYFDGFSIGSNDLTQLTLGLDRDSGVIAHLF DERNPAVKKLLSNAIQACNKAGKYIGICGQGPSDHPDLARWLMDQGIESVSLNPDSVLETWFFLAEAQAPV
Sequences:
>Translated_791_residues MVEYVVSLDKLGVHDVEHVGGKNSSLGEMISNLAGAGVSVPGGFATTAQAYRDFLELSGLNEQIHAALDALDVDDVNALA RTGAQIRQWIMEAEFPEQLNAQIRTAFAELSAGNPNLAVAVRSSATAEDLPDASFAGQQETFLNIRGVENVIRAAKEVFA SLFNDRAISYRVHQGFDHKLVALSAGVQRMVRSETGTAGVMFTLDTESGFRDVVFITGAYGLGETVVQGAVNPDEFYVHK DTLAAGRPAILRRNLGSKAIKMIYGEEAKAGRSVKVIDVEPADRARFCLSDAEVSELAKQAMIIEKHYKCPMDIEWAKDG DDGKLYIVQARPETVKSRASANVMERYLLKETGKVLVEGRAIGQRIGAGKVRIIKDVSEMDKVQPGDVLVSDMTDPDWEP VMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGNATHTLQDGQGVTVSCAEGDTGYIFEGELGFDIKTNSVDAMPDLP FKIMMNVGNPDRAFDFAQLPNAGVGLARLEFIINRMIGVHPKALLNYSVLPPEIKESVDKRIAGYDDPVGFYVDKLVEGI STLAAAFTPKKVIVRLSDFKSNEYANLIGGKLYEPEEENPMLGFRGASRYISENFRDCFELECRALKRVREEMGLTNVEI MVPFVRTLGEASQVIDLLAANGLKRGENGLRIIMMCELPSNAILAEEFLEYFDGFSIGSNDLTQLTLGLDRDSGVIAHLF DERNPAVKKLLSNAIQACNKAGKYIGICGQGPSDHPDLARWLMDQGIESVSLNPDSVLETWFFLAEAQAPV >Mature_791_residues MVEYVVSLDKLGVHDVEHVGGKNSSLGEMISNLAGAGVSVPGGFATTAQAYRDFLELSGLNEQIHAALDALDVDDVNALA RTGAQIRQWIMEAEFPEQLNAQIRTAFAELSAGNPNLAVAVRSSATAEDLPDASFAGQQETFLNIRGVENVIRAAKEVFA SLFNDRAISYRVHQGFDHKLVALSAGVQRMVRSETGTAGVMFTLDTESGFRDVVFITGAYGLGETVVQGAVNPDEFYVHK DTLAAGRPAILRRNLGSKAIKMIYGEEAKAGRSVKVIDVEPADRARFCLSDAEVSELAKQAMIIEKHYKCPMDIEWAKDG DDGKLYIVQARPETVKSRASANVMERYLLKETGKVLVEGRAIGQRIGAGKVRIIKDVSEMDKVQPGDVLVSDMTDPDWEP VMKRASAIVTNRGGRTCHAAIIARELGIPAVVGCGNATHTLQDGQGVTVSCAEGDTGYIFEGELGFDIKTNSVDAMPDLP FKIMMNVGNPDRAFDFAQLPNAGVGLARLEFIINRMIGVHPKALLNYSVLPPEIKESVDKRIAGYDDPVGFYVDKLVEGI STLAAAFTPKKVIVRLSDFKSNEYANLIGGKLYEPEEENPMLGFRGASRYISENFRDCFELECRALKRVREEMGLTNVEI MVPFVRTLGEASQVIDLLAANGLKRGENGLRIIMMCELPSNAILAEEFLEYFDGFSIGSNDLTQLTLGLDRDSGVIAHLF DERNPAVKKLLSNAIQACNKAGKYIGICGQGPSDHPDLARWLMDQGIESVSLNPDSVLETWFFLAEAQAPV
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=782, Percent_Identity=68.925831202046, Blast_Score=1144, Evalue=0.0, Organism=Escherichia coli, GI1788756, Length=479, Percent_Identity=26.0960334029228, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1788726, Length=191, Percent_Identity=31.413612565445, Blast_Score=97, Evalue=4e-21, Organism=Escherichia coli, GI48994992, Length=190, Percent_Identity=33.1578947368421, Blast_Score=97, Evalue=4e-21, Organism=Escherichia coli, GI1789193, Length=403, Percent_Identity=25.8064516129032, Blast_Score=91, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17564524, Length=329, Percent_Identity=25.8358662613982, Blast_Score=80, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 86083; Mature: 86083
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEYVVSLDKLGVHDVEHVGGKNSSLGEMISNLAGAGVSVPGGFATTAQAYRDFLELSGL CCCEEEEHHHCCCCHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC NEQIHAALDALDVDDVNALARTGAQIRQWIMEAEFPEQLNAQIRTAFAELSAGNPNLAVA CHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEE VRSSATAEDLPDASFAGQQETFLNIRGVENVIRAAKEVFASLFNDRAISYRVHQGFDHKL EECCCCHHCCCCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCH VALSAGVQRMVRSETGTAGVMFTLDTESGFRDVVFITGAYGLGETVVQGAVNPDEFYVHK HHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEECCCCCHHHHHCCCCCCCEEEEC DTLAAGRPAILRRNLGSKAIKMIYGEEAKAGRSVKVIDVEPADRARFCLSDAEVSELAKQ CHHCCCCHHHHHHCCCHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHCHHHHHHHHHH AMIIEKHYKCPMDIEWAKDGDDGKLYIVQARPETVKSRASANVMERYLLKETGKVLVEGR HHHHHHHCCCCCCCEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEECH AIGQRIGAGKVRIIKDVSEMDKVQPGDVLVSDMTDPDWEPVMKRASAIVTNRGGRTCHAA HHHHHCCCCCEEEEHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHH IIARELGIPAVVGCGNATHTLQDGQGVTVSCAEGDTGYIFEGELGFDIKTNSVDAMPDLP HHHHHCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCEEECCCCCCCCCCC FKIMMNVGNPDRAFDFAQLPNAGVGLARLEFIINRMIGVHPKALLNYSVLPPEIKESVDK CEEEEECCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHH RIAGYDDPVGFYVDKLVEGISTLAAAFTPKKVIVRLSDFKSNEYANLIGGKLYEPEEENP HHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCHHHHHCCCCCCCCCCCC MLGFRGASRYISENFRDCFELECRALKRVREEMGLTNVEIMVPFVRTLGEASQVIDLLAA CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHH NGLKRGENGLRIIMMCELPSNAILAEEFLEYFDGFSIGSNDLTQLTLGLDRDSGVIAHLF CCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEC DERNPAVKKLLSNAIQACNKAGKYIGICGQGPSDHPDLARWLMDQGIESVSLNPDSVLET CCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCEECCCHHHHHHH WFFLAEAQAPV HHHHHHCCCCC >Mature Secondary Structure MVEYVVSLDKLGVHDVEHVGGKNSSLGEMISNLAGAGVSVPGGFATTAQAYRDFLELSGL CCCEEEEHHHCCCCHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCC NEQIHAALDALDVDDVNALARTGAQIRQWIMEAEFPEQLNAQIRTAFAELSAGNPNLAVA CHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEE VRSSATAEDLPDASFAGQQETFLNIRGVENVIRAAKEVFASLFNDRAISYRVHQGFDHKL EECCCCHHCCCCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCH VALSAGVQRMVRSETGTAGVMFTLDTESGFRDVVFITGAYGLGETVVQGAVNPDEFYVHK HHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEECCCCCHHHHHCCCCCCCEEEEC DTLAAGRPAILRRNLGSKAIKMIYGEEAKAGRSVKVIDVEPADRARFCLSDAEVSELAKQ CHHCCCCHHHHHHCCCHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHCHHHHHHHHHH AMIIEKHYKCPMDIEWAKDGDDGKLYIVQARPETVKSRASANVMERYLLKETGKVLVEGR HHHHHHHCCCCCCCEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEEEECH AIGQRIGAGKVRIIKDVSEMDKVQPGDVLVSDMTDPDWEPVMKRASAIVTNRGGRTCHAA HHHHHCCCCCEEEEHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHH IIARELGIPAVVGCGNATHTLQDGQGVTVSCAEGDTGYIFEGELGFDIKTNSVDAMPDLP HHHHHCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCEEECCCCCCCCCCC FKIMMNVGNPDRAFDFAQLPNAGVGLARLEFIINRMIGVHPKALLNYSVLPPEIKESVDK CEEEEECCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHH RIAGYDDPVGFYVDKLVEGISTLAAAFTPKKVIVRLSDFKSNEYANLIGGKLYEPEEENP HHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCHHHHHCCCCCCCCCCCC MLGFRGASRYISENFRDCFELECRALKRVREEMGLTNVEIMVPFVRTLGEASQVIDLLAA CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHH NGLKRGENGLRIIMMCELPSNAILAEEFLEYFDGFSIGSNDLTQLTLGLDRDSGVIAHLF CCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEC DERNPAVKKLLSNAIQACNKAGKYIGICGQGPSDHPDLARWLMDQGIESVSLNPDSVLET CCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHCCCCEECCCHHHHHHH WFFLAEAQAPV HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1310524; 9097039; 9278503 [H]