Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
---|---|
Accession | NC_007005 |
Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is 66044524
Identifier: 66044524
GI number: 66044524
Start: 1441772
End: 1442239
Strand: Direct
Name: 66044524
Synonym: Psyr_1276
Alternate gene names: NA
Gene position: 1441772-1442239 (Clockwise)
Preceding gene: 66044523
Following gene: 66044525
Centisome position: 23.66
GC content: 59.62
Gene sequence:
>468_bases ATGCTTTTCCTGATCGCCTACATCAGCAGTGTCGTGCTGATCAACTTCGCCTTTTCCAGTGCGCCGCACCTGGACATGAT CTGGTCTGCCTGGGGCGGGTTGGTGTTCGTGTTGCGGGACATGGTGCAGATTCGCTTTGGCCATGGTGCGATCATTGCCA TGCTGGTGGCGCTGGTCCTGTCCTATGTCACCAGCGACCCCACCATCGCCTTGGCCAGCGCCACGGCGTTTGCGGTTTCC GAATGCATTGACTGGCTGGTGTTCAGCATTACCAGACGCCCGTTGCGTGATCGGTTGTGGATCAGCTCGGCACTCAGCAT TCCGCTGGATACCTTTATCTTCTTCGGCATGATCGACGCCCTGACGGCGCCGGTCGTGCTCACCGCGCTGGCATCGAAGT TCGCTGGCGTGACCATTGTCTGGATGATCATGGCCTGGCGGGCGCGCAACAGTGCGTGTCCAGGCTGA
Upstream 100 bases:
>100_bases CATTTCCTGCGTCAGGAATAATGCTTTCGTTTTCGCTTGGGCGCGGCTCTTTTCCGCGTTTGCTATCATTGCCGCTCGCT TGCACAGGCCCAAACCCTCC
Downstream 100 bases:
>100_bases GCGCCCATTTGCCGGGGCTTCGTGGTAAATTGCGCGCCTTTCTTCACAGCGGTTGCTTGCATACGGCGGGCAGCCCTCGA CATCTGCTTCACGAGGACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MLFLIAYISSVVLINFAFSSAPHLDMIWSAWGGLVFVLRDMVQIRFGHGAIIAMLVALVLSYVTSDPTIALASATAFAVS ECIDWLVFSITRRPLRDRLWISSALSIPLDTFIFFGMIDALTAPVVLTALASKFAGVTIVWMIMAWRARNSACPG
Sequences:
>Translated_155_residues MLFLIAYISSVVLINFAFSSAPHLDMIWSAWGGLVFVLRDMVQIRFGHGAIIAMLVALVLSYVTSDPTIALASATAFAVS ECIDWLVFSITRRPLRDRLWISSALSIPLDTFIFFGMIDALTAPVVLTALASKFAGVTIVWMIMAWRARNSACPG >Mature_155_residues MLFLIAYISSVVLINFAFSSAPHLDMIWSAWGGLVFVLRDMVQIRFGHGAIIAMLVALVLSYVTSDPTIALASATAFAVS ECIDWLVFSITRRPLRDRLWISSALSIPLDTFIFFGMIDALTAPVVLTALASKFAGVTIVWMIMAWRARNSACPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16973; Mature: 16973
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFLIAYISSVVLINFAFSSAPHLDMIWSAWGGLVFVLRDMVQIRFGHGAIIAMLVALVL CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH SYVTSDPTIALASATAFAVSECIDWLVFSITRRPLRDRLWISSALSIPLDTFIFFGMIDA HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LTAPVVLTALASKFAGVTIVWMIMAWRARNSACPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MLFLIAYISSVVLINFAFSSAPHLDMIWSAWGGLVFVLRDMVQIRFGHGAIIAMLVALVL CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH SYVTSDPTIALASATAFAVSECIDWLVFSITRRPLRDRLWISSALSIPLDTFIFFGMIDA HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LTAPVVLTALASKFAGVTIVWMIMAWRARNSACPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA