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The map label for this gene is nudL [H]

Identifier: 66044521

GI number: 66044521

Start: 1438999

End: 1439595

Strand: Direct

Name: nudL [H]

Synonym: Psyr_1273

Alternate gene names: 66044521

Gene position: 1438999-1439595 (Clockwise)

Preceding gene: 66044518

Following gene: 66044522

Centisome position: 23.61

GC content: 60.3

Gene sequence:

>597_bases
ATGCTGGATGAGCTACTTCGCCGTGTAGTCAGGCACACGCCAGAAACCCTCGACTCGGATCGACAATTCCCCGAGGCGGC
TGTTCTGGTGCCGATTACCCGCAGCGAGCAACCCGAGCTGATTCTGACCCTGCGCGCCAGTGGCCTGTCGACGCATGGCG
GTGAGGTGGCGTTTCCGGGTGGCCGGCGCGACCCCGGCGACCCCGATCTGATTTTTACTGCGTTGCGCGAAGCCGAGGAG
GAAATCGGCCTGCCTCCCGGGCTGGTCGAGGTGATCGGGCCGTTGAGTCCGCTGATCTCCAAGCACGGCATCAAGGTCAC
GCCTTATGTGGGGGTGATACCTGACTTCGTCGAATACCAACCCAATGACGCGGAGATCGCTGCAGTCTTCAGCGTACCGC
TGGAATTCTTTCGTCAGGACACGCGCGAGCACACTCACCGTATCGATTACGAAGGCCGCAGCTGGTACGTGCCCAGTTAC
CGTTATGGCGAGTACAAGATCTGGGGGCTTACCGCGATCATGATCGTCGAGCTAGTCAATGTGCTGTACGACACCAGGAT
CAGCCTGCATCATCCGCCCGAGCGGTCGACAATCTGA

Upstream 100 bases:

>100_bases
GCTCGGCAACCCTCTGTGTGACAGGAGTTGTCCTGCAAGGGCTTGGGCGCAGCGTTGCTTTGGTGCATGATGCCAGACAG
GCAACAGATCGAGATTTCCC

Downstream 100 bases:

>100_bases
GCCACCGGTATCTGAAGCGTCACTGTTTATAGTTCGTCCCCATGAGTACGACCCGCCCGAGGAGGCTGCATGAAATTTCG
CCTGGGAGAATCCCGTGTTC

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MLDELLRRVVRHTPETLDSDRQFPEAAVLVPITRSEQPELILTLRASGLSTHGGEVAFPGGRRDPGDPDLIFTALREAEE
EIGLPPGLVEVIGPLSPLISKHGIKVTPYVGVIPDFVEYQPNDAEIAAVFSVPLEFFRQDTREHTHRIDYEGRSWYVPSY
RYGEYKIWGLTAIMIVELVNVLYDTRISLHHPPERSTI

Sequences:

>Translated_198_residues
MLDELLRRVVRHTPETLDSDRQFPEAAVLVPITRSEQPELILTLRASGLSTHGGEVAFPGGRRDPGDPDLIFTALREAEE
EIGLPPGLVEVIGPLSPLISKHGIKVTPYVGVIPDFVEYQPNDAEIAAVFSVPLEFFRQDTREHTHRIDYEGRSWYVPSY
RYGEYKIWGLTAIMIVELVNVLYDTRISLHHPPERSTI
>Mature_198_residues
MLDELLRRVVRHTPETLDSDRQFPEAAVLVPITRSEQPELILTLRASGLSTHGGEVAFPGGRRDPGDPDLIFTALREAEE
EIGLPPGLVEVIGPLSPLISKHGIKVTPYVGVIPDFVEYQPNDAEIAAVFSVPLEFFRQDTREHTHRIDYEGRSWYVPSY
RYGEYKIWGLTAIMIVELVNVLYDTRISLHHPPERSTI

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI157785656, Length=193, Percent_Identity=33.6787564766839, Blast_Score=102, Evalue=2e-22,
Organism=Homo sapiens, GI32469515, Length=107, Percent_Identity=42.9906542056075, Blast_Score=65, Evalue=3e-11,
Organism=Escherichia coli, GI1788115, Length=177, Percent_Identity=44.0677966101695, Blast_Score=105, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17536993, Length=179, Percent_Identity=33.5195530726257, Blast_Score=80, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17510677, Length=160, Percent_Identity=32.5, Blast_Score=68, Evalue=3e-12,
Organism=Drosophila melanogaster, GI18859683, Length=171, Percent_Identity=34.5029239766082, Blast_Score=90, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 22367; Mature: 22367

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDELLRRVVRHTPETLDSDRQFPEAAVLVPITRSEQPELILTLRASGLSTHGGEVAFPG
CHHHHHHHHHHCCCHHHCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCEEECCC
GRRDPGDPDLIFTALREAEEEIGLPPGLVEVIGPLSPLISKHGIKVTPYVGVIPDFVEYQ
CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEECCHHCCCCHHHHCC
PNDAEIAAVFSVPLEFFRQDTREHTHRIDYEGRSWYVPSYRYGEYKIWGLTAIMIVELVN
CCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEECCCEEEHHHHHHHHHHHHH
VLYDTRISLHHPPERSTI
HHHHCCCEEECCCCCCCC
>Mature Secondary Structure
MLDELLRRVVRHTPETLDSDRQFPEAAVLVPITRSEQPELILTLRASGLSTHGGEVAFPG
CHHHHHHHHHHCCCHHHCCCCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCEEECCC
GRRDPGDPDLIFTALREAEEEIGLPPGLVEVIGPLSPLISKHGIKVTPYVGVIPDFVEYQ
CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEECCHHCCCCHHHHCC
PNDAEIAAVFSVPLEFFRQDTREHTHRIDYEGRSWYVPSYRYGEYKIWGLTAIMIVELVN
CCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCEECCCEEEHHHHHHHHHHHHH
VLYDTRISLHHPPERSTI
HHHHCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA