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The map label for this gene is tadA [H]

Identifier: 66044515

GI number: 66044515

Start: 1431121

End: 1431630

Strand: Direct

Name: tadA [H]

Synonym: Psyr_1267

Alternate gene names: 66044515

Gene position: 1431121-1431630 (Clockwise)

Preceding gene: 66044514

Following gene: 66044517

Centisome position: 23.49

GC content: 64.12

Gene sequence:

>510_bases
ATGCGGCAACCGCAGATCATCGACCGCAGCAAGGATCAGGATTTCATGCGCGAGGCGCTGGCACTGGCCGCGCAAGGCGC
ACTGCTGGGCGAGGTGCCTGTCGGGGCAGTGGTGGTGCAGAACGGCGAGATCATCGGTCGTGGTTACAACTGCCCGATCA
GCGGCAGCGACCCGAGCGCGCATGCCGAAATGGTCGCGATTCGTGACGCCGCCAAGGCGCTGGACAATTATCGCCTGCCG
GGCAGCACGCTCTACGTGACGCTGGAGCCGTGCAGCATGTGCGCGGGGCTGATCGTGCACTCACGGGTGGCGCGTGTGGT
CTACGGGGCGCTCGAACCCAAGGCGGGCATCGTGCAGAGCCAGGGGCAGTTTTTCAGTCAGGCATTTCTCAATCACCGCG
TACTGTTCGAAGGCGGGGTGCTGGGCGAGGAGTGCGGGACGATGCTGAGCGAGTTTTTCAGAATGCGCCGGGCAGCCAAG
GACGCTGACAAAGGCCAGGGCAACGTTTAG

Upstream 100 bases:

>100_bases
GAGTGGCGCTGGTGGCGGATAACCCCGGTGTATGGATGTTCCATTGCCACGTTATCGATCACATGGAAACCGGCCTGATG
GCCGCCATCGAGGTGGCATG

Downstream 100 bases:

>100_bases
AGCGGAGATTCGTCCGTGCTGCTGGACGAGGGGACGGGGGAGGCTGGCGGGACGGGCGGTTGGGTCTTGTCGACGCCGGG
AACATGCAGGTTGCCATCGG

Product: cytidine/deoxycytidylate deaminase, zinc-binding region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MRQPQIIDRSKDQDFMREALALAAQGALLGEVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRDAAKALDNYRLP
GSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAFLNHRVLFEGGVLGEECGTMLSEFFRMRRAAK
DADKGQGNV

Sequences:

>Translated_169_residues
MRQPQIIDRSKDQDFMREALALAAQGALLGEVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRDAAKALDNYRLP
GSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAFLNHRVLFEGGVLGEECGTMLSEFFRMRRAAK
DADKGQGNV
>Mature_169_residues
MRQPQIIDRSKDQDFMREALALAAQGALLGEVPVGAVVVQNGEIIGRGYNCPISGSDPSAHAEMVAIRDAAKALDNYRLP
GSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQSQGQFFSQAFLNHRVLFEGGVLGEECGTMLSEFFRMRRAAK
DADKGQGNV

Specific function: Deaminates adenosine-34 to inosine in tRNA-Arg2 [H]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI124107608, Length=159, Percent_Identity=32.0754716981132, Blast_Score=71, Evalue=4e-13,
Organism=Escherichia coli, GI145693172, Length=150, Percent_Identity=50, Blast_Score=156, Evalue=6e-40,
Organism=Caenorhabditis elegans, GI17554608, Length=106, Percent_Identity=41.5094339622642, Blast_Score=91, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17541138, Length=147, Percent_Identity=37.4149659863946, Blast_Score=87, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17555996, Length=114, Percent_Identity=38.5964912280702, Blast_Score=79, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21355527, Length=146, Percent_Identity=30.8219178082192, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 18170; Mature: 18170

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQPQIIDRSKDQDFMREALALAAQGALLGEVPVGAVVVQNGEIIGRGYNCPISGSDPSA
CCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCEEEEECCEEEECCCCCCCCCCCCCH
HAEMVAIRDAAKALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQS
HHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
QGQFFSQAFLNHRVLFEGGVLGEECGTMLSEFFRMRRAAKDADKGQGNV
HHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRQPQIIDRSKDQDFMREALALAAQGALLGEVPVGAVVVQNGEIIGRGYNCPISGSDPSA
CCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCEEEEECCEEEECCCCCCCCCCCCCH
HAEMVAIRDAAKALDNYRLPGSTLYVTLEPCSMCAGLIVHSRVARVVYGALEPKAGIVQS
HHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
QGQFFSQAFLNHRVLFEGGVLGEECGTMLSEFFRMRRAAKDADKGQGNV
HHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]