Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
---|---|
Accession | NC_007005 |
Length | 6,093,698 |
Click here to switch to the map view.
The map label for this gene is mltA [H]
Identifier: 66044135
GI number: 66044135
Start: 1002854
End: 1004065
Strand: Direct
Name: mltA [H]
Synonym: Psyr_0880
Alternate gene names: 66044135
Gene position: 1002854-1004065 (Clockwise)
Preceding gene: 66044134
Following gene: 66044136
Centisome position: 16.46
GC content: 63.37
Gene sequence:
>1212_bases ATGATGCTCTCTTTCAAGCCATGGTTGCGGGGCCTGGCGCTGGTTTTGCCACTGGCTGCGTTGCTGACCGCGTGTGACAA GTCCGACAAATCTGACAAGCCGGTGACGCCGTCTGCGCCGCCGCACACCACGTATAGCCAGGCTGGCTGGGACGCGCTGC CTGCGGTGTCCGACGCGGATTTGCAGGCCGGTTTTGCCTCGTGGCGCAGCGCGTGTGTTCGTTTGAAAGCAGATGCAGTG TGGGGGCCGACGTGTGCGGCGGCTGCGAGTCTTGCGGCTGCGCCGGATGCTGCGCAGATTCGCACCTTTTTGCAGGAGCA GTTGCAGGTCTACAGCCTGCGCGCCGACGGGGGTAGTGCCGATGGTTTGATCACCGGCTACTACGAGCCTGTTTATCCGG GCAGCCTGACGCAGACCGCCACGGCCAATGTGCCGGTGTATGGCATTCCGGACGATCTGATCGTGGTCAATCTGGACAGT ATTTACCCAGAGCTCAAAGGCAAGCGTCTGCGCGGTCGGCTTGAGGGGAGGGTGCTTAAGCCTTACGACGACGCTGCAAC GATCAGCACGCAGGGCTTGAACGCGCCGGTGATTGCCTGGCTGACCGACCCGATGGATCTGCAATTCCTGCAGATTCAGG GCTCGGGGCGCGTGAGTCTGGAGGATGGCTCGCAGCTGCGTCTGGGCTATGCCGATCAGAACGGTCGTCCTTATCGCGCA ATTGGTCGCTGGCTGGTAGAGCAGGGGCAGCTGAAGAAGGAGGACGTGACCATGGGCAGTATCGCGGCCTGGGCCAAGGC GCATCCGGAGCGGATCAGCGAGCTGCTGGCGAGCAATCCCAGCTACGTGTTTTTCGCCCGTAACCCCGACAGCAACGAAG GCCCGCGCGGCTCGCTGAATGTGCCGCTGACCCCGGGCTACAGCGTGGCCATCGATCGCAAGGTGATTCCGCTGGGCAGT CTGCTCTGGCTCTCGACGACGCGGCCGGATGGCAGCAGCGTGGTGCGTCCGGTCGCTGCCCAGGACACGGGCGGTGCGAT TGCCGGTGAAGTACGCGCCGACCTGTTCTGGGGGACCGGCGATGAGGCGGGCAAGCTGGCTGGCGACATGAAGCAGAAAG GCAATATCTGGCTGTTGTGGCCCAAAGGCATGCCGTTGCCTCAGTCCGCAGAAACAGCTCCTGCAGCAACCCCGGCTGCT GCCAGTCACTGA
Upstream 100 bases:
>100_bases GACTTTTCAGACAAACCCTAGGCCCCTTTGTCCGCTTCAGCCACAATGACAGCCTTTACCCACCAGCCTGCTGTGGGCTG TAAAAGGATTGGTGCTACTG
Downstream 100 bases:
>100_bases AATCCCTTCACCTCGATAGCTACCGTCCTGCTCAATGGATAGGTAGCTATCTTCTTCATGCCCCCGTTTTCCTTCCAAAT ACGCTTGAGATAGCGAAATG
Product: MltA:3D
Products: Muramic Acid Residue [C]
Alternate protein names: Mlt38; Murein hydrolase A [H]
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MMLSFKPWLRGLALVLPLAALLTACDKSDKSDKPVTPSAPPHTTYSQAGWDALPAVSDADLQAGFASWRSACVRLKADAV WGPTCAAAASLAAAPDAAQIRTFLQEQLQVYSLRADGGSADGLITGYYEPVYPGSLTQTATANVPVYGIPDDLIVVNLDS IYPELKGKRLRGRLEGRVLKPYDDAATISTQGLNAPVIAWLTDPMDLQFLQIQGSGRVSLEDGSQLRLGYADQNGRPYRA IGRWLVEQGQLKKEDVTMGSIAAWAKAHPERISELLASNPSYVFFARNPDSNEGPRGSLNVPLTPGYSVAIDRKVIPLGS LLWLSTTRPDGSSVVRPVAAQDTGGAIAGEVRADLFWGTGDEAGKLAGDMKQKGNIWLLWPKGMPLPQSAETAPAATPAA ASH
Sequences:
>Translated_403_residues MMLSFKPWLRGLALVLPLAALLTACDKSDKSDKPVTPSAPPHTTYSQAGWDALPAVSDADLQAGFASWRSACVRLKADAV WGPTCAAAASLAAAPDAAQIRTFLQEQLQVYSLRADGGSADGLITGYYEPVYPGSLTQTATANVPVYGIPDDLIVVNLDS IYPELKGKRLRGRLEGRVLKPYDDAATISTQGLNAPVIAWLTDPMDLQFLQIQGSGRVSLEDGSQLRLGYADQNGRPYRA IGRWLVEQGQLKKEDVTMGSIAAWAKAHPERISELLASNPSYVFFARNPDSNEGPRGSLNVPLTPGYSVAIDRKVIPLGS LLWLSTTRPDGSSVVRPVAAQDTGGAIAGEVRADLFWGTGDEAGKLAGDMKQKGNIWLLWPKGMPLPQSAETAPAATPAA ASH >Mature_403_residues MMLSFKPWLRGLALVLPLAALLTACDKSDKSDKPVTPSAPPHTTYSQAGWDALPAVSDADLQAGFASWRSACVRLKADAV WGPTCAAAASLAAAPDAAQIRTFLQEQLQVYSLRADGGSADGLITGYYEPVYPGSLTQTATANVPVYGIPDDLIVVNLDS IYPELKGKRLRGRLEGRVLKPYDDAATISTQGLNAPVIAWLTDPMDLQFLQIQGSGRVSLEDGSQLRLGYADQNGRPYRA IGRWLVEQGQLKKEDVTMGSIAAWAKAHPERISELLASNPSYVFFARNPDSNEGPRGSLNVPLTPGYSVAIDRKVIPLGS LLWLSTTRPDGSSVVRPVAAQDTGGAIAGEVRADLFWGTGDEAGKLAGDMKQKGNIWLLWPKGMPLPQSAETAPAATPAA ASH
Specific function: Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division. Degrades murein glycan strands and insoluble, high-molecular weight murein sacculi [H]
COG id: COG2821
COG function: function code M; Membrane-bound lytic murein transglycosylase
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789179, Length=392, Percent_Identity=29.5918367346939, Blast_Score=131, Evalue=6e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010611 - InterPro: IPR014733 - InterPro: IPR005300 [H]
Pfam domain/function: PF06725 3D; PF03562 MltA [H]
EC number: 3.2.1.- [C]
Molecular weight: Translated: 42917; Mature: 42917
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMLSFKPWLRGLALVLPLAALLTACDKSDKSDKPVTPSAPPHTTYSQAGWDALPAVSDAD CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH LQAGFASWRSACVRLKADAVWGPTCAAAASLAAAPDAAQIRTFLQEQLQVYSLRADGGSA HHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEECCCCCC DGLITGYYEPVYPGSLTQTATANVPVYGIPDDLIVVNLDSIYPELKGKRLRGRLEGRVLK CCEEEECCCCCCCCCCCCCEECCCEEEECCCCEEEEEEHHHCHHHCCCHHHHHCCCCEEC PYDDAATISTQGLNAPVIAWLTDPMDLQFLQIQGSGRVSLEDGSQLRLGYADQNGRPYRA CCCCCCEEEECCCCCCEEEEECCCCCEEEEEEECCCEEEECCCCEEEEEEECCCCCHHHH IGRWLVEQGQLKKEDVTMGSIAAWAKAHPERISELLASNPSYVFFARNPDSNEGPRGSLN HHHHHHHCCCCCHHCCCHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEE VPLTPGYSVAIDRKVIPLGSLLWLSTTRPDGSSVVRPVAAQDTGGAIAGEVRADLFWGTG CCCCCCCEEEECCEECCCCCEEEEEECCCCCCHHCCEEECCCCCCCEEECEEEEEEECCC DEAGKLAGDMKQKGNIWLLWPKGMPLPQSAETAPAATPAAASH CCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMLSFKPWLRGLALVLPLAALLTACDKSDKSDKPVTPSAPPHTTYSQAGWDALPAVSDAD CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH LQAGFASWRSACVRLKADAVWGPTCAAAASLAAAPDAAQIRTFLQEQLQVYSLRADGGSA HHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHEEEEECCCCCC DGLITGYYEPVYPGSLTQTATANVPVYGIPDDLIVVNLDSIYPELKGKRLRGRLEGRVLK CCEEEECCCCCCCCCCCCCEECCCEEEECCCCEEEEEEHHHCHHHCCCHHHHHCCCCEEC PYDDAATISTQGLNAPVIAWLTDPMDLQFLQIQGSGRVSLEDGSQLRLGYADQNGRPYRA CCCCCCEEEECCCCCCEEEEECCCCCEEEEEEECCCEEEECCCCEEEEEEECCCCCHHHH IGRWLVEQGQLKKEDVTMGSIAAWAKAHPERISELLASNPSYVFFARNPDSNEGPRGSLN HHHHHHHCCCCCHHCCCHHHHHHHHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCEE VPLTPGYSVAIDRKVIPLGSLLWLSTTRPDGSSVVRPVAAQDTGGAIAGEVRADLFWGTG CCCCCCCEEEECCEECCCCCEEEEEECCCCCCHHCCEEECCCCCCCEEECEEEEEEECCC DEAGKLAGDMKQKGNIWLLWPKGMPLPQSAETAPAATPAAASH CCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic [C]
General reaction: Cleavage Bond [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]