Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is fruA [H]
Identifier: 66044078
GI number: 66044078
Start: 930606
End: 932348
Strand: Direct
Name: fruA [H]
Synonym: Psyr_0823
Alternate gene names: 66044078
Gene position: 930606-932348 (Clockwise)
Preceding gene: 66044077
Following gene: 66044091
Centisome position: 15.27
GC content: 63.28
Gene sequence:
>1743_bases ATGAAGTTAGCCATAGTTACGGCCTGCCCGAGCGGCAAGGTCAGCAGCGTACTCAGCGCACGATTGCTCGAAGCGGCGGC CCTGCGCCAGGGCTGGGAAACCAGCGTCGAAATCATCGATCCCAACAAGGCCGATCAGCAGTTGTCCGCCGAGGACATTG AAGCTGCCGATCTTGTCCTGGTGGTCAATACCGGTCCTGTGGACTTGAGCCGCTTTGTCGGCAAGCGTCTGTTTCAGGAT TCGCCTGCGCATGCGTTGCAGGATGTCGACAGCTTTCTGCAGCGCGCCGAGCGAGAAGCGCAGGTGCATGCAGCGTCCGA AGCAGCGGCGCCTCAGGCAAGCGGTGGCAGCGGCGGGCAACCGCGCATCGTTGCAATCACGGCCTGTCCGACCGGTGTAG CCCACACGTTCATGGCGGCCGAAGCGATCCAGCAGGCTGCCAAGCGTCTGAATTACGACCTGCAAGTCGAAACCCAGGGC TCGGTAGGCGCGCGTAACCCGCTCAGCGCCAAGGCCATCGCCGATGCCGATGTGGTGCTGCTGGCGGCGGATATCGAAGT CAACACCGACCGCTTTGCCGGCAAGAAGATCTACCGTTGCGGCACCGGGATCGCGCTCAAGCAGTCCGAAGCGACTCTGA AAAAAGCCCTGGCGGAAGGGCAGGTGGAGTCCGATGAGGCCGCCGCCAAGTCACCTGCCAGACAAGAGAAGGCGGGCGTC TACAAACACCTGCTGACCGGCGTGTCGTTCATGCTGCCGATGGTCGTGGCGGGCGGGCTGTTGATCGCTCTTTCCTTCGT ATTCGGTATCACCGCGTTCAAGGAGCCGGGCACGCTGGCTGCGGCACTGATGCAGATTGGCGGGGAAGCGGCGTTCAAAC TGATGGTGCCGTTGCTGGCCGGGTACATCGCCTATTCGATTGCTGACCGTCCGGGGCTGGCCCCCGGCATGATCGGTGGT CTGTTGGCGAGTACGCTGGGGGCCGGGTTCATCGGCGGTATCGTCGCAGGCTTTCTGGCCGGTTACAGTGCTGCCGCGAT CAACCGCTACGCACGTCTGCCGGCCAGCGTCGAAGCGCTCAAGCCGATTCTGATCATCCCGTTGCTGTCGAGCCTGTTCA CCGGTCTGGTGATGATCTACGTGGTCGGCAAGCCGGTTGCCGGGATGCTCGAAGCGTTGACGCACTTCCTCGACAGCATG GGCACCACCAACGCGATCCTGTTAGGCGTGGTGCTGGGCGCAATGATGTGCGTCGACCTCGGTGGGCCGATCAACAAGGC GTCCTACGCGTTCTCGGTCGGTTTGCTGGCGTCCCAGAGCTACGCGCCGATGGCCACCGCCATGGCTGCGGGTATGGTGC CACCCATCGGTATGGGCATCGCTACGATCCTGGCTCGCCGCAAGTTCGCCCAGAGCGAGCGTGAGGCCGGCAAGGCGGCG TTCGTGCTGGGGCTGTGCTTCATTTCGGAAGGTGCCATTCCCTTTGCCGCCAAGGACCCGTTGCGGGTGATTCCGGCCAG TGTCGTGGGTGGCGCGCTGACCGGTGCGCTGTCGATGTACTTCGGCTGCAAGCTGATGGCACCGCATGGCGGCCTGTTCG TGATGCTGATCCCCAATGCCATCAACCATGCGCTGCTTTATCTGCTGGCGATCATCGCCGGTAGTGTGCTGACCGGCGTG ATCTACGCGCTGATCAAGCGCCCGGAGCCCGCTGACATGGAAGTGGCGCCCGCAGCCGCCTGA
Upstream 100 bases:
>100_bases GACCCAGATCGGTTTCGGTATTACCGATGCCGCGCAACTCAAACGGCTTGAAGGCGGCGTCACTGTACGCAGCCTTTCAG AACAATAAGAGAGGATCGTC
Downstream 100 bases:
>100_bases TGATGCAAGGCGCGGGCTGCCCCGCGCCTTCTTCCTGCTCTAGCGTTCGAGTGCCAGAGCAACCCCCTGACCACCACCGA TGCACAGCGTGGCCAGGCCC
Product: phosphotransferase system PTS, fructose-specific IIB subunit:PTS fructose IIC component
Products: NA
Alternate protein names: EIIBC-Fru; Fructose-specific phosphotransferase enzyme IIB component; EIII-Fru; PTS system fructose-specific EIIB component; Fructose permease IIC component; PTS system fructose-specific EIIC component [H]
Number of amino acids: Translated: 580; Mature: 580
Protein sequence:
>580_residues MKLAIVTACPSGKVSSVLSARLLEAAALRQGWETSVEIIDPNKADQQLSAEDIEAADLVLVVNTGPVDLSRFVGKRLFQD SPAHALQDVDSFLQRAEREAQVHAASEAAAPQASGGSGGQPRIVAITACPTGVAHTFMAAEAIQQAAKRLNYDLQVETQG SVGARNPLSAKAIADADVVLLAADIEVNTDRFAGKKIYRCGTGIALKQSEATLKKALAEGQVESDEAAAKSPARQEKAGV YKHLLTGVSFMLPMVVAGGLLIALSFVFGITAFKEPGTLAAALMQIGGEAAFKLMVPLLAGYIAYSIADRPGLAPGMIGG LLASTLGAGFIGGIVAGFLAGYSAAAINRYARLPASVEALKPILIIPLLSSLFTGLVMIYVVGKPVAGMLEALTHFLDSM GTTNAILLGVVLGAMMCVDLGGPINKASYAFSVGLLASQSYAPMATAMAAGMVPPIGMGIATILARRKFAQSEREAGKAA FVLGLCFISEGAIPFAAKDPLRVIPASVVGGALTGALSMYFGCKLMAPHGGLFVMLIPNAINHALLYLLAIIAGSVLTGV IYALIKRPEPADMEVAPAAA
Sequences:
>Translated_580_residues MKLAIVTACPSGKVSSVLSARLLEAAALRQGWETSVEIIDPNKADQQLSAEDIEAADLVLVVNTGPVDLSRFVGKRLFQD SPAHALQDVDSFLQRAEREAQVHAASEAAAPQASGGSGGQPRIVAITACPTGVAHTFMAAEAIQQAAKRLNYDLQVETQG SVGARNPLSAKAIADADVVLLAADIEVNTDRFAGKKIYRCGTGIALKQSEATLKKALAEGQVESDEAAAKSPARQEKAGV YKHLLTGVSFMLPMVVAGGLLIALSFVFGITAFKEPGTLAAALMQIGGEAAFKLMVPLLAGYIAYSIADRPGLAPGMIGG LLASTLGAGFIGGIVAGFLAGYSAAAINRYARLPASVEALKPILIIPLLSSLFTGLVMIYVVGKPVAGMLEALTHFLDSM GTTNAILLGVVLGAMMCVDLGGPINKASYAFSVGLLASQSYAPMATAMAAGMVPPIGMGIATILARRKFAQSEREAGKAA FVLGLCFISEGAIPFAAKDPLRVIPASVVGGALTGALSMYFGCKLMAPHGGLFVMLIPNAINHALLYLLAIIAGSVLTGV IYALIKRPEPADMEVAPAAA >Mature_580_residues MKLAIVTACPSGKVSSVLSARLLEAAALRQGWETSVEIIDPNKADQQLSAEDIEAADLVLVVNTGPVDLSRFVGKRLFQD SPAHALQDVDSFLQRAEREAQVHAASEAAAPQASGGSGGQPRIVAITACPTGVAHTFMAAEAIQQAAKRLNYDLQVETQG SVGARNPLSAKAIADADVVLLAADIEVNTDRFAGKKIYRCGTGIALKQSEATLKKALAEGQVESDEAAAKSPARQEKAGV YKHLLTGVSFMLPMVVAGGLLIALSFVFGITAFKEPGTLAAALMQIGGEAAFKLMVPLLAGYIAYSIADRPGLAPGMIGG LLASTLGAGFIGGIVAGFLAGYSAAAINRYARLPASVEALKPILIIPLLSSLFTGLVMIYVVGKPVAGMLEALTHFLDSM GTTNAILLGVVLGAMMCVDLGGPINKASYAFSVGLLASQSYAPMATAMAAGMVPPIGMGIATILARRKFAQSEREAGKAA FVLGLCFISEGAIPFAAKDPLRVIPASVVGGALTGALSMYFGCKLMAPHGGLFVMLIPNAINHALLYLLAIIAGSVLTGV IYALIKRPEPADMEVAPAAA
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1299
COG function: function code G; Phosphotransferase system, fructose-specific IIC component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1788492, Length=573, Percent_Identity=57.0680628272251, Blast_Score=617, Evalue=1e-178, Organism=Escherichia coli, GI1786951, Length=493, Percent_Identity=35.0912778904665, Blast_Score=283, Evalue=2e-77, Organism=Escherichia coli, GI87082348, Length=432, Percent_Identity=36.3425925925926, Blast_Score=254, Evalue=1e-68, Organism=Escherichia coli, GI1790386, Length=304, Percent_Identity=42.1052631578947, Blast_Score=213, Evalue=2e-56, Organism=Escherichia coli, GI1788729, Length=391, Percent_Identity=27.8772378516624, Blast_Score=129, Evalue=4e-31, Organism=Escherichia coli, GI1790387, Length=96, Percent_Identity=48.9583333333333, Blast_Score=100, Evalue=4e-22, Organism=Escherichia coli, GI1788730, Length=96, Percent_Identity=34.375, Blast_Score=72, Evalue=9e-14, Organism=Escherichia coli, GI1790390, Length=87, Percent_Identity=39.0804597701149, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR003352 - InterPro: IPR013014 - InterPro: IPR003353 - InterPro: IPR006327 [H]
Pfam domain/function: PF02378 PTS_EIIC; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 59741; Mature: 59741
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: PS51099 PTS_EIIB_TYPE_2 ; PS51104 PTS_EIIC_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLAIVTACPSGKVSSVLSARLLEAAALRQGWETSVEIIDPNKADQQLSAEDIEAADLVL CCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHCCHHCCCCCCEEE VVNTGPVDLSRFVGKRLFQDSPAHALQDVDSFLQRAEREAQVHAASEAAAPQASGGSGGQ EEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PRIVAITACPTGVAHTFMAAEAIQQAAKRLNYDLQVETQGSVGARNPLSAKAIADADVVL CEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHCCCCEEE LAADIEVNTDRFAGKKIYRCGTGIALKQSEATLKKALAEGQVESDEAAAKSPARQEKAGV EEEEEEECCCHHCCCHHEECCCCCEEECHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHH YKHLLTGVSFMLPMVVAGGLLIALSFVFGITAFKEPGTLAAALMQIGGEAAFKLMVPLLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHH GYIAYSIADRPGLAPGMIGGLLASTLGAGFIGGIVAGFLAGYSAAAINRYARLPASVEAL HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH KPILIIPLLSSLFTGLVMIYVVGKPVAGMLEALTHFLDSMGTTNAILLGVVLGAMMCVDL HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC GGPINKASYAFSVGLLASQSYAPMATAMAAGMVPPIGMGIATILARRKFAQSEREAGKAA CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH FVLGLCFISEGAIPFAAKDPLRVIPASVVGGALTGALSMYFGCKLMAPHGGLFVMLIPNA HHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCEEECCCCCEEEEECCHH INHALLYLLAIIAGSVLTGVIYALIKRPEPADMEVAPAAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MKLAIVTACPSGKVSSVLSARLLEAAALRQGWETSVEIIDPNKADQQLSAEDIEAADLVL CCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHCCHHCCCCCCEEE VVNTGPVDLSRFVGKRLFQDSPAHALQDVDSFLQRAEREAQVHAASEAAAPQASGGSGGQ EEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PRIVAITACPTGVAHTFMAAEAIQQAAKRLNYDLQVETQGSVGARNPLSAKAIADADVVL CEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHCCCCEEE LAADIEVNTDRFAGKKIYRCGTGIALKQSEATLKKALAEGQVESDEAAAKSPARQEKAGV EEEEEEECCCHHCCCHHEECCCCCEEECHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHH YKHLLTGVSFMLPMVVAGGLLIALSFVFGITAFKEPGTLAAALMQIGGEAAFKLMVPLLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHH GYIAYSIADRPGLAPGMIGGLLASTLGAGFIGGIVAGFLAGYSAAAINRYARLPASVEAL HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH KPILIIPLLSSLFTGLVMIYVVGKPVAGMLEALTHFLDSMGTTNAILLGVVLGAMMCVDL HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC GGPINKASYAFSVGLLASQSYAPMATAMAAGMVPPIGMGIATILARRKFAQSEREAGKAA CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHH FVLGLCFISEGAIPFAAKDPLRVIPASVVGGALTGALSMYFGCKLMAPHGGLFVMLIPNA HHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCEEECCCCCEEEEECCHH INHALLYLLAIIAGSVLTGVIYALIKRPEPADMEVAPAAA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3076173; 9278503; 9097040; 1981619 [H]