Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is ampE [C]
Identifier: 66044073
GI number: 66044073
Start: 923762
End: 924598
Strand: Direct
Name: ampE [C]
Synonym: Psyr_0818
Alternate gene names: 66044073
Gene position: 923762-924598 (Clockwise)
Preceding gene: 66044072
Following gene: 66044076
Centisome position: 15.16
GC content: 62.72
Gene sequence:
>837_bases ATGAGTTTTCTGGTGCTACTGCTGGCCGTTCTTATCGAAAAGTTTTCTGCGCTGCGTCAGCGCGTTCAGCGTGACGGACC GTGGCTGAAAGAACTGGCAAAACTTGAGGCCAGCCCGCGGACCTCGACACGTCCGTGGGTAATGCTGGCGCTGCTGGTGC TTGTGCCCGTGCTGATCCTGCAACTGGCGCTGACCATCATCGGCTCGGTGGCCTATGGCTGGCTGGTTCTGCCCATTCAC CTGCTGGTGTTGATCTACAGCCTTGGCCGGGTTGACCTGATTGCGGTGCTCGGGCCGTTTCGCGATGCCTGCCGACGTGG CGATGCGCAGGCGGCGGTGCATGTGGCGGAGCGCGACATGGGCGTGCAGGCGGACAACAGCGAGCAATTGCTGCAGGGTG TGCAGGGCTACCTGCTCTGGCAGGCGTTTCAGAGTTTCTTCGCCGTGATTTTCTGGTACTTCGTACTCGGCCCGGTGGCT GCGCTGGCCTACAGGCTGTTGGCACTTGCTGTCGAGCACGGCAAGACACCCGCACTGGTGGAACGCGCAGGGCAGTTGCG CCATGCGTTCGACTGGGTACCGGTCAGGTTGCTCGCCGCCAGCTTCGCATTGGTCGGCAATTTTGTGGCGGTCACCCGGG TGATGCTGCATGAGCTGCTGAACTGGAACATCAGTGCTGCACAACTGATCACGCGCGTCGGCTGCGCCGCCAGCGAGGTT CCGCCGCCGATGATGGGGGCGCAGGGCGTTACCGGCCTTGACATGCTCTGGGAGCTGCTGGTACGTGCTGCGGTGGTCTG GTACGCGGGGTTCGCCCTGTGGACCCTTCTGCTCTGA
Upstream 100 bases:
>100_bases TCACAGTGACGTGGCGCCGGGACGCAAGACTGATCCTGGGCCCTGTTTTGACTGGGCCAGGTTTCGAGCGGCTTTGCTGG ATTGATGTGAGGGACGAACA
Downstream 100 bases:
>100_bases TTCGATCCTGGCCGCGCAGGCTCAGGCATGTGACATCAGGTGTGTGACAGGCGAGGCCAGTCGAACAGTTCGCAGGCATT GTCCGTGCTCGCCTGGGCCA
Product: ampE protein
Products: NA
Alternate protein names: Signaling Modulator Of AmpD AmpE; Inner Membrane Protein
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MSFLVLLLAVLIEKFSALRQRVQRDGPWLKELAKLEASPRTSTRPWVMLALLVLVPVLILQLALTIIGSVAYGWLVLPIH LLVLIYSLGRVDLIAVLGPFRDACRRGDAQAAVHVAERDMGVQADNSEQLLQGVQGYLLWQAFQSFFAVIFWYFVLGPVA ALAYRLLALAVEHGKTPALVERAGQLRHAFDWVPVRLLAASFALVGNFVAVTRVMLHELLNWNISAAQLITRVGCAASEV PPPMMGAQGVTGLDMLWELLVRAAVVWYAGFALWTLLL
Sequences:
>Translated_278_residues MSFLVLLLAVLIEKFSALRQRVQRDGPWLKELAKLEASPRTSTRPWVMLALLVLVPVLILQLALTIIGSVAYGWLVLPIH LLVLIYSLGRVDLIAVLGPFRDACRRGDAQAAVHVAERDMGVQADNSEQLLQGVQGYLLWQAFQSFFAVIFWYFVLGPVA ALAYRLLALAVEHGKTPALVERAGQLRHAFDWVPVRLLAASFALVGNFVAVTRVMLHELLNWNISAAQLITRVGCAASEV PPPMMGAQGVTGLDMLWELLVRAAVVWYAGFALWTLLL >Mature_277_residues SFLVLLLAVLIEKFSALRQRVQRDGPWLKELAKLEASPRTSTRPWVMLALLVLVPVLILQLALTIIGSVAYGWLVLPIHL LVLIYSLGRVDLIAVLGPFRDACRRGDAQAAVHVAERDMGVQADNSEQLLQGVQGYLLWQAFQSFFAVIFWYFVLGPVAA LAYRLLALAVEHGKTPALVERAGQLRHAFDWVPVRLLAASFALVGNFVAVTRVMLHELLNWNISAAQLITRVGCAASEVP PPMMGAQGVTGLDMLWELLVRAAVVWYAGFALWTLLL
Specific function: Putative Signaling Protein In Beta-Lactamase Regulation. AMPe Seems Not To Act As A Direct Sensor For Beta-Lactams. [C]
COG id: COG3725
COG function: function code V; Membrane protein required for beta-lactamase induction
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30701; Mature: 30570
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLVLLLAVLIEKFSALRQRVQRDGPWLKELAKLEASPRTSTRPWVMLALLVLVPVLIL CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH QLALTIIGSVAYGWLVLPIHLLVLIYSLGRVDLIAVLGPFRDACRRGDAQAAVHVAERDM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC GVQADNSEQLLQGVQGYLLWQAFQSFFAVIFWYFVLGPVAALAYRLLALAVEHGKTPALV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ERAGQLRHAFDWVPVRLLAASFALVGNFVAVTRVMLHELLNWNISAAQLITRVGCAASEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHCCC PPPMMGAQGVTGLDMLWELLVRAAVVWYAGFALWTLLL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SFLVLLLAVLIEKFSALRQRVQRDGPWLKELAKLEASPRTSTRPWVMLALLVLVPVLIL HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH QLALTIIGSVAYGWLVLPIHLLVLIYSLGRVDLIAVLGPFRDACRRGDAQAAVHVAERDM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC GVQADNSEQLLQGVQGYLLWQAFQSFFAVIFWYFVLGPVAALAYRLLALAVEHGKTPALV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH ERAGQLRHAFDWVPVRLLAASFALVGNFVAVTRVMLHELLNWNISAAQLITRVGCAASEV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHCCC PPPMMGAQGVTGLDMLWELLVRAAVVWYAGFALWTLLL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA