Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is 66043981
Identifier: 66043981
GI number: 66043981
Start: 819437
End: 819952
Strand: Direct
Name: 66043981
Synonym: Psyr_0716
Alternate gene names: NA
Gene position: 819437-819952 (Clockwise)
Preceding gene: 66043980
Following gene: 66043982
Centisome position: 13.45
GC content: 55.62
Gene sequence:
>516_bases ATGGCTGGTGAAACCCGATATCGCCAGACCGGCATGACCCTGATCGAGGTGCTGGTCTCGGTATTGATTCTGGCCATCGG CCTGCTGGGCGCGGCGGCCATCCAGCTCAACGCGCTCAAATACACCGACAGCTCGGCGATGACCAGCCAGGCGAGCTTCA TTGCTTACGACATGATGGATCGTATCCGCGCCAATGTTGATGGTAATGCCAGTGCCAATGGGTCGACCAATGTACTGGCT ACTTATAATTTACCGAATCTGGATGCGGCTCCGGCTGCCAACCTGAACAAGGCCAGAGATCAGGATCTGTTTGATTTCAA AGACAATATCGGAAACTTCGCAAGAGAGAGCGGCACGGGCAGCATTGTGGTCAGTGATTCTACGTTGGTAACCATCACCA TTGGCTGGAGCGATAACCGCGCTGCGGGTGCGAGTAATCAGGCAACAGGAAGCCCTGCGGCAACTCCGGTACCTCGGAGC TTTCAACTGGTCTCCCGGATCGGGGTCAACCCATGA
Upstream 100 bases:
>100_bases CCCCGGCTGCGGCGGTGACCATGACTTACACCCGAGGCACCATTAGCAAGACCATAAAGGTCTGTCTGACCGGTCGGATC ACCCTGGGTGGAGGCTGCTG
Downstream 100 bases:
>100_bases GAAAGCTTTCCAGAGGCTTCGGCCTGGTCGAAATCATGGTGGCGCTGGTCCTGGGACTGGTGGTCAGTCTCGGTATCGTG CAGATATTCACGGCTGCCAG
Product: type IV pilus assembly protein PilV
Products: NA
Alternate protein names: Type IV Pilus Assembly Protein PilV; Pre-Pilin Leader Sequence
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MAGETRYRQTGMTLIEVLVSVLILAIGLLGAAAIQLNALKYTDSSAMTSQASFIAYDMMDRIRANVDGNASANGSTNVLA TYNLPNLDAAPAANLNKARDQDLFDFKDNIGNFARESGTGSIVVSDSTLVTITIGWSDNRAAGASNQATGSPAATPVPRS FQLVSRIGVNP
Sequences:
>Translated_171_residues MAGETRYRQTGMTLIEVLVSVLILAIGLLGAAAIQLNALKYTDSSAMTSQASFIAYDMMDRIRANVDGNASANGSTNVLA TYNLPNLDAAPAANLNKARDQDLFDFKDNIGNFARESGTGSIVVSDSTLVTITIGWSDNRAAGASNQATGSPAATPVPRS FQLVSRIGVNP >Mature_170_residues AGETRYRQTGMTLIEVLVSVLILAIGLLGAAAIQLNALKYTDSSAMTSQASFIAYDMMDRIRANVDGNASANGSTNVLAT YNLPNLDAAPAANLNKARDQDLFDFKDNIGNFARESGTGSIVVSDSTLVTITIGWSDNRAAGASNQATGSPAATPVPRSF QLVSRIGVNP
Specific function: Unknown
COG id: COG4967
COG function: function code NU; Tfp pilus assembly protein PilV
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17900; Mature: 17769
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGETRYRQTGMTLIEVLVSVLILAIGLLGAAAIQLNALKYTDSSAMTSQASFIAYDMMD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHH RIRANVDGNASANGSTNVLATYNLPNLDAAPAANLNKARDQDLFDFKDNIGNFARESGTG HHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC SIVVSDSTLVTITIGWSDNRAAGASNQATGSPAATPVPRSFQLVSRIGVNP EEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure AGETRYRQTGMTLIEVLVSVLILAIGLLGAAAIQLNALKYTDSSAMTSQASFIAYDMMD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHH RIRANVDGNASANGSTNVLATYNLPNLDAAPAANLNKARDQDLFDFKDNIGNFARESGTG HHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC SIVVSDSTLVTITIGWSDNRAAGASNQATGSPAATPVPRSFQLVSRIGVNP EEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA