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The map label for this gene is yaaD [H]

Identifier: 66043977

GI number: 66043977

Start: 816843

End: 817319

Strand: Direct

Name: yaaD [H]

Synonym: Psyr_0712

Alternate gene names: 66043977

Gene position: 816843-817319 (Clockwise)

Preceding gene: 66043976

Following gene: 66043978

Centisome position: 13.4

GC content: 56.81

Gene sequence:

>477_bases
ATGACTGAGCAATCTTCGACTCAAGGCTCGTCTGACGAGCTGCGCATCGGTCAGAACACGCAGGTCACTCTGCACTTCGC
CCTGCGTCTGGAAAACGGCGATACCGTCGACAGCACCTTCGAAAAGGCCCCGGCCACGTTCAAGGTCGGTGACGGCAACC
TGCTGCCCGGCTTCGAAATGGCGATTTTCGGTTTCAAGGCGGGCGATAAAAAGACCGTCGAGATTCTGCCGGAGAACGCC
TTTGGTCAGCCCAACCCACAAAACGTGCAGATCATGCCACGCTCGCAGTTCGTGGGCATGGAACTGTCCGAAGGGTTGCT
GGTGATCTTCAACGACGCCGCCAATACCGAGTTGCCCGGCGTGGTGAAAGCGTTCGATGACGAGCAGGTCACCATCGACT
TCAATCACCCGCTGGCAGGCAAGACTCTGAGCTTTGAAGTGGAAATCTTCGAAGTGAAGGCGATTCTGGCTTCCTGA

Upstream 100 bases:

>100_bases
TACTTCCCTGCATTCAACGTCGCGGACAGTGCGATCAGCGTCGGCGCAGTCATGCTGGCGCTGGACATGTTCAAGAGCAA
GAAAACCGGAGAGACCGTCA

Downstream 100 bases:

>100_bases
TATTCGCCGTCAAGCCCGGCCAAGGCCGGGCTACCCCGTACCAACCATGAGGCACCGCATGCAAATCAAACTCGCCAACC
CCCGCGGCTTTTGTGCCGGA

Product: peptidylprolyl isomerase, FKBP-type

Products: NA

Alternate protein names: PPIase; Rotamase [H]

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MTEQSSTQGSSDELRIGQNTQVTLHFALRLENGDTVDSTFEKAPATFKVGDGNLLPGFEMAIFGFKAGDKKTVEILPENA
FGQPNPQNVQIMPRSQFVGMELSEGLLVIFNDAANTELPGVVKAFDDEQVTIDFNHPLAGKTLSFEVEIFEVKAILAS

Sequences:

>Translated_158_residues
MTEQSSTQGSSDELRIGQNTQVTLHFALRLENGDTVDSTFEKAPATFKVGDGNLLPGFEMAIFGFKAGDKKTVEILPENA
FGQPNPQNVQIMPRSQFVGMELSEGLLVIFNDAANTELPGVVKAFDDEQVTIDFNHPLAGKTLSFEVEIFEVKAILAS
>Mature_157_residues
TEQSSTQGSSDELRIGQNTQVTLHFALRLENGDTVDSTFEKAPATFKVGDGNLLPGFEMAIFGFKAGDKKTVEILPENAF
GQPNPQNVQIMPRSQFVGMELSEGLLVIFNDAANTELPGVVKAFDDEQVTIDFNHPLAGKTLSFEVEIFEVKAILAS

Specific function: PPIases accelerate the folding of proteins [H]

COG id: COG1047

COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerases 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PPIase FKBP-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786211, Length=143, Percent_Identity=37.7622377622378, Blast_Score=114, Evalue=4e-27,
Organism=Escherichia coli, GI1789748, Length=140, Percent_Identity=30, Blast_Score=80, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001179 [H]

Pfam domain/function: PF00254 FKBP_C [H]

EC number: =5.2.1.8 [H]

Molecular weight: Translated: 17195; Mature: 17063

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: PS50059 FKBP_PPIASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEQSSTQGSSDELRIGQNTQVTLHFALRLENGDTVDSTFEKAPATFKVGDGNLLPGFEM
CCCCCCCCCCCCCEEECCCCEEEEEEEEEECCCCCCCCHHHHCCCEEEECCCCCCCCCEE
AIFGFKAGDKKTVEILPENAFGQPNPQNVQIMPRSQFVGMELSEGLLVIFNDAANTELPG
EEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCEEECEECCCCEEEEEECCCCCCCCC
VVKAFDDEQVTIDFNHPLAGKTLSFEVEIFEVKAILAS
EEEECCCCEEEEEECCCCCCCEEEEEEEEEEEEEEECC
>Mature Secondary Structure 
TEQSSTQGSSDELRIGQNTQVTLHFALRLENGDTVDSTFEKAPATFKVGDGNLLPGFEM
CCCCCCCCCCCCEEECCCCEEEEEEEEEECCCCCCCCHHHHCCCEEEECCCCCCCCCEE
AIFGFKAGDKKTVEILPENAFGQPNPQNVQIMPRSQFVGMELSEGLLVIFNDAANTELPG
EEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCEEECEECCCCEEEEEECCCCCCCCC
VVKAFDDEQVTIDFNHPLAGKTLSFEVEIFEVKAILAS
EEEECCCCEEEEEECCCCCCCEEEEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2121716 [H]