Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
---|---|
Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is insN [H]
Identifier: 66043918
GI number: 66043918
Start: 739648
End: 739947
Strand: Direct
Name: insN [H]
Synonym: Psyr_0651
Alternate gene names: 66043918
Gene position: 739648-739947 (Clockwise)
Preceding gene: 66043917
Following gene: 66043919
Centisome position: 12.14
GC content: 53.0
Gene sequence:
>300_bases ATGTCAAAACGTCAGTTTCCAACCGAGTTCAGACTTGAGGCTGCCCGCCTTGTTCTTGATGCCAATTATTCAACCGCTCA GGCCTGCGAGGCTATGGGTGTCGGGGCAACAGCACTGCGCCGCTGGGTTGAACAGTTAAGGCAGGAGCGCGGGGGAGTAA CGCCTGAAACGGCTAATGCCATGACCGCTGAACAACAACAGATCCAGGCTCTGCATGCCAAAATTCGCAAGCTTGAAATC GAGAAGGAAATCCTAAAAAAGGCTACCGCTCTCTTGATGTCCGATTCCCTCGATCGGTGA
Upstream 100 bases:
>100_bases AGCCAACTTGCTCGCGAAGGCGATGGATCAGTGATGTGGCCTAATCATTCCGGACACACCCAAAGGAGCGGTACCTTACC GCTCAACGATGAGGTGTCCG
Downstream 100 bases:
>100_bases TTCTGATCGAGAAGTTGAGTGAGCGTTTTACTGTGACTGACTTGTGCCGTGTGTTTGGAATGAACCGCAGCCGGTATTAC GACTATCTGAAGCAGCGGGA
Product: helix-turn-helix, Fis-type
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MSKRQFPTEFRLEAARLVLDANYSTAQACEAMGVGATALRRWVEQLRQERGGVTPETANAMTAEQQQIQALHAKIRKLEI EKEILKKATALLMSDSLDR
Sequences:
>Translated_99_residues MSKRQFPTEFRLEAARLVLDANYSTAQACEAMGVGATALRRWVEQLRQERGGVTPETANAMTAEQQQIQALHAKIRKLEI EKEILKKATALLMSDSLDR >Mature_98_residues SKRQFPTEFRLEAARLVLDANYSTAQACEAMGVGATALRRWVEQLRQERGGVTPETANAMTAEQQQIQALHAKIRKLEIE KEILKKATALLMSDSLDR
Specific function: Involved in the transposition of the insertion sequence IS911 [H]
COG id: COG2963
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002514 [H]
Pfam domain/function: PF01527 Transposase_8 [H]
EC number: NA
Molecular weight: Translated: 11130; Mature: 10999
Theoretical pI: Translated: 9.28; Mature: 9.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRQFPTEFRLEAARLVLDANYSTAQACEAMGVGATALRRWVEQLRQERGGVTPETANA CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHH MTAEQQQIQALHAKIRKLEIEKEILKKATALLMSDSLDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SKRQFPTEFRLEAARLVLDANYSTAQACEAMGVGATALRRWVEQLRQERGGVTPETANA CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHH MTAEQQQIQALHAKIRKLEIEKEILKKATALLMSDSLDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2163395 [H]