Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is 66043882
Identifier: 66043882
GI number: 66043882
Start: 704107
End: 704829
Strand: Direct
Name: 66043882
Synonym: Psyr_0615
Alternate gene names: NA
Gene position: 704107-704829 (Clockwise)
Preceding gene: 66043881
Following gene: 66043883
Centisome position: 11.55
GC content: 55.05
Gene sequence:
>723_bases TTGAATATCATCCTTCTGACCGGCAGGCAGTCAGAGGCGCTGCCCGATGAGGGTGAGTACCCGCACTACCTGTGCGAATA CAACGGCAAGCCACTGATTCATACACTGATAGACAACTGTGCGGTACTTCAGCCGCGCAGGATGATCTGCACATTCTCGA ACAACGATATCGCACGGCTGCACCTTCGCAACATGGTTCCGCAGATGCACCCGTCGGCCAGTGTTCTAGCGGTTCACAAC ATCACCCGCGGCGCGGCGTGCACGGCGCTTCTGGCGAGCGAAGACATCGACAACGATGACGAATTGCTGATTCTCAGTGT CAGCGACTTCCTGGATATCGAGCTGCAGGATGTAGTGCGCACGTTTCGGCAAAGTCATGAGGATGCCGGAGTGGTCATCT TCAATTCTCTGCACCCTCGTTATTCATTCGCGCGCCTGGATAGCGACTGCCGGGTTATCGAAGCTGCCGAAAAAAATCCG ATCAGCTCAAACGCCATTGCAGGTGTGTACTGGTTCAAGTCCGGCTCGCTGTTCGTATCGGCGGCCAAAGAAATGATTCG CAAGGACGCCAGGGTCAATGACAACTTCTACATAGCCCCCGCTCTCAATGAGCTGGTGCTGTTGCAGAAGAGGATCGGCG CCTACCGGATCGAACCCAATCAGTACCGGCCACTGAAAACCGACAGTCAGCTCCACGCTTTCGAAGCAGGAGAAATGCGA TGA
Upstream 100 bases:
>100_bases ATGTTCTGGTCGTGGCTGAAACCTGCGACGTAAACCTCAATAACATTCTTGGCAAAGTCGAACAGATCAACTTCGACAAG GCGGCTGTCCTGTGAGCGCG
Downstream 100 bases:
>100_bases AAACGGCCAGACTGGAAGACATGGTCAAAGGCTGGTTCGTGGGCGGATTCGAACCTGCAGTTTTCAGTACCGAGTCCTGT GAGGTCGGGGTCAAGGCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: Nucleotidyltransferase; DTDP-Glucose Pyrophosphorylase; Phosphatase/Phosphohexomutase; Nucleoside-Diphosphate-Sugar Pyrophosphorylase; PTS System IIBC Component; Nucleotidyl Transferase Family; UTP-Glucose-1-Phosphate Uridylyltransferase; Lipopolysaccharide Biosynthesis Protein; Capsular Polysaccharide Biosynthesis Protein
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MNIILLTGRQSEALPDEGEYPHYLCEYNGKPLIHTLIDNCAVLQPRRMICTFSNNDIARLHLRNMVPQMHPSASVLAVHN ITRGAACTALLASEDIDNDDELLILSVSDFLDIELQDVVRTFRQSHEDAGVVIFNSLHPRYSFARLDSDCRVIEAAEKNP ISSNAIAGVYWFKSGSLFVSAAKEMIRKDARVNDNFYIAPALNELVLLQKRIGAYRIEPNQYRPLKTDSQLHAFEAGEMR
Sequences:
>Translated_240_residues MNIILLTGRQSEALPDEGEYPHYLCEYNGKPLIHTLIDNCAVLQPRRMICTFSNNDIARLHLRNMVPQMHPSASVLAVHN ITRGAACTALLASEDIDNDDELLILSVSDFLDIELQDVVRTFRQSHEDAGVVIFNSLHPRYSFARLDSDCRVIEAAEKNP ISSNAIAGVYWFKSGSLFVSAAKEMIRKDARVNDNFYIAPALNELVLLQKRIGAYRIEPNQYRPLKTDSQLHAFEAGEMR >Mature_240_residues MNIILLTGRQSEALPDEGEYPHYLCEYNGKPLIHTLIDNCAVLQPRRMICTFSNNDIARLHLRNMVPQMHPSASVLAVHN ITRGAACTALLASEDIDNDDELLILSVSDFLDIELQDVVRTFRQSHEDAGVVIFNSLHPRYSFARLDSDCRVIEAAEKNP ISSNAIAGVYWFKSGSLFVSAAKEMIRKDARVNDNFYIAPALNELVLLQKRIGAYRIEPNQYRPLKTDSQLHAFEAGEMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27073; Mature: 27073
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIILLTGRQSEALPDEGEYPHYLCEYNGKPLIHTLIDNCAVLQPRRMICTFSNNDIARL CEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCHHCCCCCEEEEEECCCCEEEE HLRNMVPQMHPSASVLAVHNITRGAACTALLASEDIDNDDELLILSVSDFLDIELQDVVR EHHHHCCCCCCCCEEEEEECCCCCHHHHHEECCCCCCCCCCEEEEEECCHHCCCHHHHHH TFRQSHEDAGVVIFNSLHPRYSFARLDSDCRVIEAAEKNPISSNAIAGVYWFKSGSLFVS HHHHCCCCCCEEEEECCCCCCHHHHCCCCCEEEECCCCCCCCCCCEEEEEEEECCCEEHH AAKEMIRKDARVNDNFYIAPALNELVLLQKRIGAYRIEPNQYRPLKTDSQLHAFEAGEMR HHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHCCEEECCCCCCCCCCCCCEEEECCCCCC >Mature Secondary Structure MNIILLTGRQSEALPDEGEYPHYLCEYNGKPLIHTLIDNCAVLQPRRMICTFSNNDIARL CEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHCCHHCCCCCEEEEEECCCCEEEE HLRNMVPQMHPSASVLAVHNITRGAACTALLASEDIDNDDELLILSVSDFLDIELQDVVR EHHHHCCCCCCCCEEEEEECCCCCHHHHHEECCCCCCCCCCEEEEEECCHHCCCHHHHHH TFRQSHEDAGVVIFNSLHPRYSFARLDSDCRVIEAAEKNPISSNAIAGVYWFKSGSLFVS HHHHCCCCCCEEEEECCCCCCHHHHCCCCCEEEECCCCCCCCCCCEEEEEEEECCCEEHH AAKEMIRKDARVNDNFYIAPALNELVLLQKRIGAYRIEPNQYRPLKTDSQLHAFEAGEMR HHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHCCEEECCCCCCCCCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA