Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is 66043822
Identifier: 66043822
GI number: 66043822
Start: 628344
End: 629042
Strand: Direct
Name: 66043822
Synonym: Psyr_0555
Alternate gene names: NA
Gene position: 628344-629042 (Clockwise)
Preceding gene: 66043821
Following gene: 66043824
Centisome position: 10.31
GC content: 59.51
Gene sequence:
>699_bases ATGATGAATTTTCTACGCCTTCCCTTGATCCTGCTGATGACTGGCGTTCTGGGTCTGGCTGGTTGCAGTGTGCGCCAGCC GACCGCGCTTTATCAGCTCGATAGTGGTGAGCCTGGTCAGCCGAAACAGAGTAGTGGTCTGGCAGTTTTGCTGGGTCCTG TTTCGGTGGCCGACTATCTGCAACGCGAAACTCTGCTGCAACGCCAGCCTGACGGGACCTTGACCGCTTCGTCCGATGGG CGCTGGGCGGGCAACCTGTCTTCGGATATAGATCAGTTGCTCTTGCGTCAGCTGGCCTGGAAGCTCGACAGCCAGCGCGT CGTCATGGCGCCTGCGACGGCCAGTTTCACGCCCGATGTTCAGGTCGTGCTGTCCATCACCCGTCTGGACTCAGGGGCCA AGCAGCCTGCGGTACTGGATGCGCAATGGCGTCTTCTGGACCGTAAGGGCCATGTCCGTGACAGCCGACTGGTTCACCTG GAACAAGTCCACGCCGGCAGTTCTGCCGATCAGGTCAAGGCCCAGGGTATGCTGTTGCAGCGCCTGGCTGATCAGGTCAG CACGGCGATCAAGCCGATTTCCTGGCAGGCGCTCGATGAGCCGAAAAAAACGCCTGTCGCCAAGGCCAAAGAGCCTGACA AGCCAAGAATTCCGCTGGCTTCCCCCATACGCACCGATCTTGAAGTGTTCCGCTTCTAG
Upstream 100 bases:
>100_bases GGATGATATGGGGTCTTGGGGTGCATGCGTGGCTCAGTGCCTGCATGGGTCTTGAAAGTACTTATACTGTGGCCTGTCTC TGGACGGCCACCTGGATGGG
Downstream 100 bases:
>100_bases GATTGGCCCAACAAAAAGCCCGCAGCGATGCGGGCTTTTTGTTGGGCGCTCATCTCTGGTTCCCACGCCCCAGCGTTCCT GACGCTTCGCACAGTCAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MMNFLRLPLILLMTGVLGLAGCSVRQPTALYQLDSGEPGQPKQSSGLAVLLGPVSVADYLQRETLLQRQPDGTLTASSDG RWAGNLSSDIDQLLLRQLAWKLDSQRVVMAPATASFTPDVQVVLSITRLDSGAKQPAVLDAQWRLLDRKGHVRDSRLVHL EQVHAGSSADQVKAQGMLLQRLADQVSTAIKPISWQALDEPKKTPVAKAKEPDKPRIPLASPIRTDLEVFRF
Sequences:
>Translated_232_residues MMNFLRLPLILLMTGVLGLAGCSVRQPTALYQLDSGEPGQPKQSSGLAVLLGPVSVADYLQRETLLQRQPDGTLTASSDG RWAGNLSSDIDQLLLRQLAWKLDSQRVVMAPATASFTPDVQVVLSITRLDSGAKQPAVLDAQWRLLDRKGHVRDSRLVHL EQVHAGSSADQVKAQGMLLQRLADQVSTAIKPISWQALDEPKKTPVAKAKEPDKPRIPLASPIRTDLEVFRF >Mature_232_residues MMNFLRLPLILLMTGVLGLAGCSVRQPTALYQLDSGEPGQPKQSSGLAVLLGPVSVADYLQRETLLQRQPDGTLTASSDG RWAGNLSSDIDQLLLRQLAWKLDSQRVVMAPATASFTPDVQVVLSITRLDSGAKQPAVLDAQWRLLDRKGHVRDSRLVHL EQVHAGSSADQVKAQGMLLQRLADQVSTAIKPISWQALDEPKKTPVAKAKEPDKPRIPLASPIRTDLEVFRF
Specific function: Unknown
COG id: COG3009
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25372; Mature: 25372
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNFLRLPLILLMTGVLGLAGCSVRQPTALYQLDSGEPGQPKQSSGLAVLLGPVSVADYL CCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEECCHHHHHHH QRETLLQRQPDGTLTASSDGRWAGNLSSDIDQLLLRQLAWKLDSQRVVMAPATASFTPDV HHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCH QVVLSITRLDSGAKQPAVLDAQWRLLDRKGHVRDSRLVHLEQVHAGSSADQVKAQGMLLQ HHEEEHHHHCCCCCCCEEECHHHHHHCCCCCCCCHHHEEHHHHHCCCCHHHHHHHHHHHH RLADQVSTAIKPISWQALDEPKKTPVAKAKEPDKPRIPLASPIRTDLEVFRF HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MMNFLRLPLILLMTGVLGLAGCSVRQPTALYQLDSGEPGQPKQSSGLAVLLGPVSVADYL CCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCEEEECCHHHHHHH QRETLLQRQPDGTLTASSDGRWAGNLSSDIDQLLLRQLAWKLDSQRVVMAPATASFTPDV HHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCH QVVLSITRLDSGAKQPAVLDAQWRLLDRKGHVRDSRLVHLEQVHAGSSADQVKAQGMLLQ HHEEEHHHHCCCCCCCEEECHHHHHHCCCCCCCCHHHEEHHHHHCCCCHHHHHHHHHHHH RLADQVSTAIKPISWQALDEPKKTPVAKAKEPDKPRIPLASPIRTDLEVFRF HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA