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The map label for this gene is 66043820

Identifier: 66043820

GI number: 66043820

Start: 625376

End: 625897

Strand: Direct

Name: 66043820

Synonym: Psyr_0553

Alternate gene names: NA

Gene position: 625376-625897 (Clockwise)

Preceding gene: 66043819

Following gene: 66043821

Centisome position: 10.26

GC content: 60.54

Gene sequence:

>522_bases
GTGAGCGACGTGCAGCCCGGCAAGCGCGCTGGCAAGGTGCTGATGATCATGGCTTGGGCGGCCGGTCTGTTTCTCGCGAC
GCGCTTTTTCGGCGATTGGGAAGACCGGCAGCAGAATCCCAACGCCGTGGTCACCTCGCAACACGGTGACGGCTATATAG
AAGTGCAGCTGGCAGGCAATCGACAGGGGCACTTCGTCACGACCGGCCAGATCAACGGCCGGACAGCGGAGTTCATGATC
GACACCGGGGCGACCGATGTGGCCGTACCCGGTGATATGGCTGACCGCCTGGGGCTCAAGCGTGGCTTTCCGGTCACGGT
CAGTACGGCCAATGGTAACAGTCAGGGTTTTCGAACCACGCTTGACCGCTTGCAACTGGGCGATATCGTCCTGACCAATG
TGCGTGCCCTGGTGGCACCCGGTCTGGACGGTGAACAGGTGCTGCTGGGTATGAGCGCAATGAAACAACTCGAATTCACA
CAGCGTGGCGGCAATTTGCTGCTGCGCCAGTCAACGAAATGA

Upstream 100 bases:

>100_bases
GGATCGGCATCGACAATAATTTCGGTGTGCGTGCCGACGGTGAGAAACGCCCGATCGTCTGGCGTTTCGCTGCGCCTGAG
GCGGGCTGGAGTGCCGGGCA

Downstream 100 bases:

>100_bases
TGAGGCCCGCATGAGCGACTCCCTTGACCTCAGCCTGGATGGTGTAGAACGCCGATCACTGGCGGACTTCACCGAACAGG
CCTACCTCAACTACTCCATG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MSDVQPGKRAGKVLMIMAWAAGLFLATRFFGDWEDRQQNPNAVVTSQHGDGYIEVQLAGNRQGHFVTTGQINGRTAEFMI
DTGATDVAVPGDMADRLGLKRGFPVTVSTANGNSQGFRTTLDRLQLGDIVLTNVRALVAPGLDGEQVLLGMSAMKQLEFT
QRGGNLLLRQSTK

Sequences:

>Translated_173_residues
MSDVQPGKRAGKVLMIMAWAAGLFLATRFFGDWEDRQQNPNAVVTSQHGDGYIEVQLAGNRQGHFVTTGQINGRTAEFMI
DTGATDVAVPGDMADRLGLKRGFPVTVSTANGNSQGFRTTLDRLQLGDIVLTNVRALVAPGLDGEQVLLGMSAMKQLEFT
QRGGNLLLRQSTK
>Mature_172_residues
SDVQPGKRAGKVLMIMAWAAGLFLATRFFGDWEDRQQNPNAVVTSQHGDGYIEVQLAGNRQGHFVTTGQINGRTAEFMID
TGATDVAVPGDMADRLGLKRGFPVTVSTANGNSQGFRTTLDRLQLGDIVLTNVRALVAPGLDGEQVLLGMSAMKQLEFTQ
RGGNLLLRQSTK

Specific function: Unknown

COG id: COG3577

COG function: function code R; Predicted aspartyl protease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011969
- InterPro:   IPR021109
- InterPro:   IPR001969 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18665; Mature: 18533

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVQPGKRAGKVLMIMAWAAGLFLATRFFGDWEDRQQNPNAVVTSQHGDGYIEVQLAGN
CCCCCCCCHHCCEEEEHHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCEEEEEECCC
RQGHFVTTGQINGRTAEFMIDTGATDVAVPGDMADRLGLKRGFPVTVSTANGNSQGFRTT
CCCCEEEECEECCCEEEEEEECCCCCEECCCCHHHHHCCCCCCCEEEEECCCCCCCHHHH
LDRLQLGDIVLTNVRALVAPGLDGEQVLLGMSAMKQLEFTQRGGNLLLRQSTK
HHHHHHCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC
>Mature Secondary Structure 
SDVQPGKRAGKVLMIMAWAAGLFLATRFFGDWEDRQQNPNAVVTSQHGDGYIEVQLAGN
CCCCCCCHHCCEEEEHHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCEEEEEECCC
RQGHFVTTGQINGRTAEFMIDTGATDVAVPGDMADRLGLKRGFPVTVSTANGNSQGFRTT
CCCCEEEECEECCCEEEEEEECCCCCEECCCCHHHHHCCCCCCCEEEEECCCCCCCHHHH
LDRLQLGDIVLTNVRALVAPGLDGEQVLLGMSAMKQLEFTQRGGNLLLRQSTK
HHHHHHCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1917841 [H]