Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is 66043819
Identifier: 66043819
GI number: 66043819
Start: 624402
End: 625379
Strand: Direct
Name: 66043819
Synonym: Psyr_0552
Alternate gene names: NA
Gene position: 624402-625379 (Clockwise)
Preceding gene: 66043818
Following gene: 66043820
Centisome position: 10.25
GC content: 61.25
Gene sequence:
>978_bases TTGATACGAGCCTGGCTCGCCGCCCTGATCCTGATTGCCGCGCCGGTTGTCGCTGCGCCACTCGAGGCCCTGAAGCTGCA ATCCGAGCATCCGGTGGACGACATGGCGGGTGGCAATCTGTCAGGTCTGGCGATGTGCAATGGCCAGCTGTGGACCGTGT CCGACCGTGACGACGATGTGCTGTACAGCCTGGATGTGTCGCAAGACACCTGGAAGGCTCAGTCACATCATATTGACGCA CCTGCGCCACAAAGCTATCTGCCGTTGAAGTTGCGTTTCATGGCCGGGCTTTCCGCGCTGATACGCGGCGGTAGTCTGGA TTTCGAGGGTGTCAGCTGTGATGCAGCCGGCAATCGCTATCTGGTCAGCGAGGCTTATGGCACGGTGCTCAAGGTTCCGG TGAGTGGCAAATCGTTCTGGCTGGATTTGCCGAAGGAACTGGTGGATCAGGCGCGGGCTCAGGGCATGTTGCAGCGTTTC AACGCGATTTTCGAAGGGATTGCCGTCAGTCCGGCAGGCGACCGTCTCTGGCTGGCGGCCGAACGCGAGAAGCGCGGCTT GCTGGTGGTGCAACGCGACAAGGAGCAGTGGACCTGCGGGCAAAGCTGCGTGCTGCTGTCCGAGTCCGGTCTGGACGCGT TGCCGCCGGAGCAGGGCAGCAAAAAGGTGTCGACGGATTTTTCTGATGTGTCGTTGTACAACGGCAAGCTGTTCACGCTG GAACGTGCGGTGTATCGCATCTGTCGGCGTGATCTCGAAACCGGGCAGGTCGAGCGTTGCTGGTCGTTCGCCAAGGAAGC CATGGTGCCGTCGCGTCGTTACGATCAACCCTACGGGCTGACCGAGGCACTGGTGGTGGACGAGAAGGGCGCGTGGATCG GCATCGACAATAATTTCGGTGTGCGTGCCGACGGTGAGAAACGCCCGATCGTCTGGCGTTTCGCTGCGCCTGAGGCGGGC TGGAGTGCCGGGCAGTGA
Upstream 100 bases:
>100_bases CAGCCACGTCGGAAATGATGGACATGTTGCTGGCTAAGAAGCGTGCAGGTGATCGCAAGTCCTGGCTCGAATCCAAGGGC AACCTTGCCGAGGTCCTGAC
Downstream 100 bases:
>100_bases GCGACGTGCAGCCCGGCAAGCGCGCTGGCAAGGTGCTGATGATCATGGCTTGGGCGGCCGGTCTGTTTCTCGCGACGCGC TTTTTCGGCGATTGGGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MIRAWLAALILIAAPVVAAPLEALKLQSEHPVDDMAGGNLSGLAMCNGQLWTVSDRDDDVLYSLDVSQDTWKAQSHHIDA PAPQSYLPLKLRFMAGLSALIRGGSLDFEGVSCDAAGNRYLVSEAYGTVLKVPVSGKSFWLDLPKELVDQARAQGMLQRF NAIFEGIAVSPAGDRLWLAAEREKRGLLVVQRDKEQWTCGQSCVLLSESGLDALPPEQGSKKVSTDFSDVSLYNGKLFTL ERAVYRICRRDLETGQVERCWSFAKEAMVPSRRYDQPYGLTEALVVDEKGAWIGIDNNFGVRADGEKRPIVWRFAAPEAG WSAGQ
Sequences:
>Translated_325_residues MIRAWLAALILIAAPVVAAPLEALKLQSEHPVDDMAGGNLSGLAMCNGQLWTVSDRDDDVLYSLDVSQDTWKAQSHHIDA PAPQSYLPLKLRFMAGLSALIRGGSLDFEGVSCDAAGNRYLVSEAYGTVLKVPVSGKSFWLDLPKELVDQARAQGMLQRF NAIFEGIAVSPAGDRLWLAAEREKRGLLVVQRDKEQWTCGQSCVLLSESGLDALPPEQGSKKVSTDFSDVSLYNGKLFTL ERAVYRICRRDLETGQVERCWSFAKEAMVPSRRYDQPYGLTEALVVDEKGAWIGIDNNFGVRADGEKRPIVWRFAAPEAG WSAGQ >Mature_325_residues MIRAWLAALILIAAPVVAAPLEALKLQSEHPVDDMAGGNLSGLAMCNGQLWTVSDRDDDVLYSLDVSQDTWKAQSHHIDA PAPQSYLPLKLRFMAGLSALIRGGSLDFEGVSCDAAGNRYLVSEAYGTVLKVPVSGKSFWLDLPKELVDQARAQGMLQRF NAIFEGIAVSPAGDRLWLAAEREKRGLLVVQRDKEQWTCGQSCVLLSESGLDALPPEQGSKKVSTDFSDVSLYNGKLFTL ERAVYRICRRDLETGQVERCWSFAKEAMVPSRRYDQPYGLTEALVVDEKGAWIGIDNNFGVRADGEKRPIVWRFAAPEAG WSAGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35735; Mature: 35735
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRAWLAALILIAAPVVAAPLEALKLQSEHPVDDMAGGNLSGLAMCNGQLWTVSDRDDDV CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEEECCEEEEECCCCCCE LYSLDVSQDTWKAQSHHIDAPAPQSYLPLKLRFMAGLSALIRGGSLDFEGVSCDAAGNRY EEEEECCCCHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCEEECCCCCEE LVSEAYGTVLKVPVSGKSFWLDLPKELVDQARAQGMLQRFNAIFEGIAVSPAGDRLWLAA EEEECCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCEECCCCCEEEEEE EREKRGLLVVQRDKEQWTCGQSCVLLSESGLDALPPEQGSKKVSTDFSDVSLYNGKLFTL CCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCEEEHH ERAVYRICRRDLETGQVERCWSFAKEAMVPSRRYDQPYGLTEALVVDEKGAWIGIDNNFG HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCC VRADGEKRPIVWRFAAPEAGWSAGQ CCCCCCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure MIRAWLAALILIAAPVVAAPLEALKLQSEHPVDDMAGGNLSGLAMCNGQLWTVSDRDDDV CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCEEEEECCEEEEECCCCCCE LYSLDVSQDTWKAQSHHIDAPAPQSYLPLKLRFMAGLSALIRGGSLDFEGVSCDAAGNRY EEEEECCCCHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHCCCCCCCCCEEECCCCCEE LVSEAYGTVLKVPVSGKSFWLDLPKELVDQARAQGMLQRFNAIFEGIAVSPAGDRLWLAA EEEECCCCEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCEECCCCCEEEEEE EREKRGLLVVQRDKEQWTCGQSCVLLSESGLDALPPEQGSKKVSTDFSDVSLYNGKLFTL CCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCEEEHH ERAVYRICRRDLETGQVERCWSFAKEAMVPSRRYDQPYGLTEALVVDEKGAWIGIDNNFG HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEEEECCCCC VRADGEKRPIVWRFAAPEAGWSAGQ CCCCCCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA