Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is 66043798
Identifier: 66043798
GI number: 66043798
Start: 599742
End: 601151
Strand: Direct
Name: 66043798
Synonym: Psyr_0531
Alternate gene names: NA
Gene position: 599742-601151 (Clockwise)
Preceding gene: 66043797
Following gene: 66043799
Centisome position: 9.84
GC content: 64.54
Gene sequence:
>1410_bases TTGAGTCGCAAGCAGCAGTTGCTCAAGCGCCATCGCCGTAACAAGCGACTGGCGTTGCTGGGTGGACTGCTCCTGCTGAT CGCGGTGGGCGTGCTGGTGGCCTGGTGGCTGGCGCCGGTGCTGGCCGTGTGTGCCTGGGTCGCCCATGAGGCCTGGTTCG CCGATCATCTGTTCTATTCGCCGTCTGACGATTATCAGTACACCTTTGCTGCCGACAGCGAAGTGCCGGGCGTGCGCCTC GACGGCGGCACGTTGCTGATCGACCCCGCAGTACAACTGAACGGCGACGAAACGCTGATATTGGCACTGACGGTCAAAAG CACCTGGCTCGGGCGCTTTCTCGATCCGGTGGTCGAGCTGCAAGGTCAGGGCCTCAACGACCAGCAGGCATTCGAGCGCG GCGTCTGCGGCGTGCGTTATCTGAACCTGACCGGCCTGGGCGAGCCGTTGGCCGCAGGTGTGCTGAAACTGCGCGGGCGT TGCTGCCGCCTTGCCGGCACACCTCGTCTCTGGCTGTTTCGCCAACCGGATGCGCGAAAACAGCGTGTCATGGTCATCGC ACCGCACGCCGATGATGCCGAGCTGGCCGCCTTCGGGCTGTACAGCCAGGCCGAGGAGGCGTGGATCATCACGCTGACCG CCGGTGAGATCGAGGCCGAGCATTATCGGCAGATGGGCATGGAGCGTGCCGAAGCTGCGCGTATGAAGGGCCGCTTGCGG GCCTGGGACAGTATCGCCGTGGCGCGCTGGGGCGGGGTGCCCGAGTCGCAGTGTGTGCAATTGGGCTATTTCTGCCTGCA ACTGCCCGCCATGCAGGCTGCGCCGGATACGCCTGTTGGTTCGCGGGAAGCCGATCTGACCGATACCCGCCTGTTTCGTC AGTTCAATACCCTGCCATTGCCCGGCGACAACGGCCAGCCGACCTGGAATAACCTGCTCGCCGACCTGCGCGCGCTGATT CTCAAGGCCCGGCCGCAGGTTGTGGTGATGCCGCATCCTGCCATCGACCCTCATCCCGATCACATCTGCGCCCAGGCTGC GGTGCGTGAAGCGCTGCTCGGGCTCGAATGGCAGCCGGACGTAGTGCTCGGTTATGCCAATCACCTGCACGACAACGACC GCTGGCCGATGGGCGATGCCTACAGCGGCATCAGCCTGCCGCCGGTCTTCGATGCCACGCTGCCGCTGGTGCCGTACAGC CTTCAATTGTCGGTCGCCGCGCAACGCGACAAGGCCATGGCACTGGGCATGATGCATGACCTGCTGCCACGCATGCCGTT CAAGCGTCGTGTGCGCCGTGCGCTGCAGCGCGTTCTGGCCGGTCGTCACTGGCCAGCCGAGGGCGAAAACGAATTCTTCC GCAAGGCGGTGCGACGACACGAGTTGTTCTGGTGCAGCCGTGATCTCTGA
Upstream 100 bases:
>100_bases AGAACGCCCGCGCACTGGGCAAATCGCTGCGTTTTTCCTTCGGTCGTGCCGACCGCGAGTACAAGGACCGATGGTGCAAC CCCGTTCCGGTGTTCCAGAT
Downstream 100 bases:
>100_bases TTCAGCAGGCGCAGTACTGCAAGGAAAACCATGAAAGTTCTACTGCTGGTCCAGAAAGAGCAGCGTGCGATTCTGGACCG TCTCTATGACGGCATCGCCG
Product: LmbE-like protein
Products: NA
Alternate protein names: Lmbe Family Protein; LmbE-Like Protein; Deacetylase
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MSRKQQLLKRHRRNKRLALLGGLLLLIAVGVLVAWWLAPVLAVCAWVAHEAWFADHLFYSPSDDYQYTFAADSEVPGVRL DGGTLLIDPAVQLNGDETLILALTVKSTWLGRFLDPVVELQGQGLNDQQAFERGVCGVRYLNLTGLGEPLAAGVLKLRGR CCRLAGTPRLWLFRQPDARKQRVMVIAPHADDAELAAFGLYSQAEEAWIITLTAGEIEAEHYRQMGMERAEAARMKGRLR AWDSIAVARWGGVPESQCVQLGYFCLQLPAMQAAPDTPVGSREADLTDTRLFRQFNTLPLPGDNGQPTWNNLLADLRALI LKARPQVVVMPHPAIDPHPDHICAQAAVREALLGLEWQPDVVLGYANHLHDNDRWPMGDAYSGISLPPVFDATLPLVPYS LQLSVAAQRDKAMALGMMHDLLPRMPFKRRVRRALQRVLAGRHWPAEGENEFFRKAVRRHELFWCSRDL
Sequences:
>Translated_469_residues MSRKQQLLKRHRRNKRLALLGGLLLLIAVGVLVAWWLAPVLAVCAWVAHEAWFADHLFYSPSDDYQYTFAADSEVPGVRL DGGTLLIDPAVQLNGDETLILALTVKSTWLGRFLDPVVELQGQGLNDQQAFERGVCGVRYLNLTGLGEPLAAGVLKLRGR CCRLAGTPRLWLFRQPDARKQRVMVIAPHADDAELAAFGLYSQAEEAWIITLTAGEIEAEHYRQMGMERAEAARMKGRLR AWDSIAVARWGGVPESQCVQLGYFCLQLPAMQAAPDTPVGSREADLTDTRLFRQFNTLPLPGDNGQPTWNNLLADLRALI LKARPQVVVMPHPAIDPHPDHICAQAAVREALLGLEWQPDVVLGYANHLHDNDRWPMGDAYSGISLPPVFDATLPLVPYS LQLSVAAQRDKAMALGMMHDLLPRMPFKRRVRRALQRVLAGRHWPAEGENEFFRKAVRRHELFWCSRDL >Mature_468_residues SRKQQLLKRHRRNKRLALLGGLLLLIAVGVLVAWWLAPVLAVCAWVAHEAWFADHLFYSPSDDYQYTFAADSEVPGVRLD GGTLLIDPAVQLNGDETLILALTVKSTWLGRFLDPVVELQGQGLNDQQAFERGVCGVRYLNLTGLGEPLAAGVLKLRGRC CRLAGTPRLWLFRQPDARKQRVMVIAPHADDAELAAFGLYSQAEEAWIITLTAGEIEAEHYRQMGMERAEAARMKGRLRA WDSIAVARWGGVPESQCVQLGYFCLQLPAMQAAPDTPVGSREADLTDTRLFRQFNTLPLPGDNGQPTWNNLLADLRALIL KARPQVVVMPHPAIDPHPDHICAQAAVREALLGLEWQPDVVLGYANHLHDNDRWPMGDAYSGISLPPVFDATLPLVPYSL QLSVAAQRDKAMALGMMHDLLPRMPFKRRVRRALQRVLAGRHWPAEGENEFFRKAVRRHELFWCSRDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52521; Mature: 52390
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRKQQLLKRHRRNKRLALLGGLLLLIAVGVLVAWWLAPVLAVCAWVAHEAWFADHLFYS CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEC PSDDYQYTFAADSEVPGVRLDGGTLLIDPAVQLNGDETLILALTVKSTWLGRFLDPVVEL CCCCCEEEEECCCCCCCEEECCCEEEECCCEEECCCCEEEEEEEECHHHHHHHHHHHHHH QGQGLNDQQAFERGVCGVRYLNLTGLGEPLAAGVLKLRGRCCRLAGTPRLWLFRQPDARK CCCCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCHHEECCCCCCEEEEECCCCCC QRVMVIAPHADDAELAAFGLYSQAEEAWIITLTAGEIEAEHYRQMGMERAEAARMKGRLR CEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCHHHHHHHHHHHHHH AWDSIAVARWGGVPESQCVQLGYFCLQLPAMQAAPDTPVGSREADLTDTRLFRQFNTLPL HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC PGDNGQPTWNNLLADLRALILKARPQVVVMPHPAIDPHPDHICAQAAVREALLGLEWQPD CCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCC VVLGYANHLHDNDRWPMGDAYSGISLPPVFDATLPLVPYSLQLSVAAQRDKAMALGMMHD EEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHH LLPRMPFKRRVRRALQRVLAGRHWPAEGENEFFRKAVRRHELFWCSRDL HHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEECCCC >Mature Secondary Structure SRKQQLLKRHRRNKRLALLGGLLLLIAVGVLVAWWLAPVLAVCAWVAHEAWFADHLFYS CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEC PSDDYQYTFAADSEVPGVRLDGGTLLIDPAVQLNGDETLILALTVKSTWLGRFLDPVVEL CCCCCEEEEECCCCCCCEEECCCEEEECCCEEECCCCEEEEEEEECHHHHHHHHHHHHHH QGQGLNDQQAFERGVCGVRYLNLTGLGEPLAAGVLKLRGRCCRLAGTPRLWLFRQPDARK CCCCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCHHEECCCCCCEEEEECCCCCC QRVMVIAPHADDAELAAFGLYSQAEEAWIITLTAGEIEAEHYRQMGMERAEAARMKGRLR CEEEEEECCCCCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHCHHHHHHHHHHHHHH AWDSIAVARWGGVPESQCVQLGYFCLQLPAMQAAPDTPVGSREADLTDTRLFRQFNTLPL HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC PGDNGQPTWNNLLADLRALILKARPQVVVMPHPAIDPHPDHICAQAAVREALLGLEWQPD CCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCC VVLGYANHLHDNDRWPMGDAYSGISLPPVFDATLPLVPYSLQLSVAAQRDKAMALGMMHD EEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHH LLPRMPFKRRVRRALQRVLAGRHWPAEGENEFFRKAVRRHELFWCSRDL HHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA