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The map label for this gene is lpsE [H]

Identifier: 66043796

GI number: 66043796

Start: 597719

End: 598849

Strand: Direct

Name: lpsE [H]

Synonym: Psyr_0529

Alternate gene names: 66043796

Gene position: 597719-598849 (Clockwise)

Preceding gene: 66043795

Following gene: 66043797

Centisome position: 9.81

GC content: 62.25

Gene sequence:

>1131_bases
ATGACACGCTCGGTTGAACGACACGTACTGCAGTTCTGTCACGGTTATGACGGGCCGTTTCTGGACTGCGCGCGGCAATA
CGCCAGCCTGTTCGCCGGCAAGGGCTATCGGGTCACGACGGTGTTTCTGACCGGTGCCGCCGATCCGGATGTCGTTGCTG
ACTGCGGTTCGGACGAGGTGCTGTTCATGGAGTACAGCTCCAGTGCCATTCGCGGCCTGAAGCTGGGCGCCATCCGTGAC
CTGCGCAAAATTGCTGCCACGCGCAGTTTCAGCTTCTGCATCGCGCACCGCTTCAAGCCGGTGTACATAGCCCTGCTGGC
GACGAAGCTGCCGGTGATCGGTGTGCATCATGCGTTCGGCGATTACCACCGGCGCAGTCGCAAGCTGTTCGCCAACCTGT
TTCGCAAGCGCCTGAGCCTGCTTGGTGTTTCCGACGCGGTTCGCGACGACATGCGCAGCAGCCTGCCCAAGTGGTCGGCC
GAGCGCATTCAGACCCTGTACAACCGGATCGATGTCGAGCAACTGCAGGGCAGTCAGTTTTCCGCTGAAGATGCCCGCGC
AGAGTTGGGCCTGTCGGCGTCGGCCTGGATCGTCGCCAACGTCGGTCGTCTGCATCCCGACAAGGATCAGGCCACGCTGT
TGCGCGGTTTTGCCGAAGCGCTGCCCGATCTTCCCGAGAACAGCCAGCTGGTGATTCTCGGCAAGGGGCGTCTGGAAGAA
GACCTCAAGGCCCTGGCGCTGGAACTGGGCATCGGTCCGCAGGTGCTGTTCCTTGGGCAAGTGCCTGACGCGCGCCGCTA
CTTCAAGGCCTTCGACGTGTTCGCCTTGAGCTCGGACCACGAACCGTTCGGCATGGTCCTGCTGGAGGCGATGGTCGCCG
GTGTGCCGCTGGTTGCAACCTCATGCGGCGGCGCCAAGGAAGTGGTTGAAGACGTTGGCCTGTTGTTCCCGCTGGGTGAC
GTGCATAGCCTGGCACACGGCCTGGTGCACATGGCCGGTCTCGATGCCGAACAACGTCAGGATTGTGCCAAGCGCATGCT
GTTGCGCTTGCGCGAACGTTTTTCCGATCACGCTGTGCGTAATGTCTTCTGGCGTCTGCCACAAGTCTCCAGCCTGACAG
CGGGGGCCTGA

Upstream 100 bases:

>100_bases
ATCTGCTCGCCGACCGATGCGCTGAACATGTTCTTCGGCTCGGACCTCGAGTACCTGATCATGGAAGACATCCTGGTGGT
AAAAGAGGGCGTCGAGGCTT

Downstream 100 bases:

>100_bases
TGCTCAATCGATTCAAGGGCTGGCGCGAGCGTGGCTGGGTGCAGATCGATGCGGCTGCCTACGAGCAGGCCTGGCAGCGG
TTTGGCGGCAGCGTCGCCAC

Product: glycosyl transferase, group 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MTRSVERHVLQFCHGYDGPFLDCARQYASLFAGKGYRVTTVFLTGAADPDVVADCGSDEVLFMEYSSSAIRGLKLGAIRD
LRKIAATRSFSFCIAHRFKPVYIALLATKLPVIGVHHAFGDYHRRSRKLFANLFRKRLSLLGVSDAVRDDMRSSLPKWSA
ERIQTLYNRIDVEQLQGSQFSAEDARAELGLSASAWIVANVGRLHPDKDQATLLRGFAEALPDLPENSQLVILGKGRLEE
DLKALALELGIGPQVLFLGQVPDARRYFKAFDVFALSSDHEPFGMVLLEAMVAGVPLVATSCGGAKEVVEDVGLLFPLGD
VHSLAHGLVHMAGLDAEQRQDCAKRMLLRLRERFSDHAVRNVFWRLPQVSSLTAGA

Sequences:

>Translated_376_residues
MTRSVERHVLQFCHGYDGPFLDCARQYASLFAGKGYRVTTVFLTGAADPDVVADCGSDEVLFMEYSSSAIRGLKLGAIRD
LRKIAATRSFSFCIAHRFKPVYIALLATKLPVIGVHHAFGDYHRRSRKLFANLFRKRLSLLGVSDAVRDDMRSSLPKWSA
ERIQTLYNRIDVEQLQGSQFSAEDARAELGLSASAWIVANVGRLHPDKDQATLLRGFAEALPDLPENSQLVILGKGRLEE
DLKALALELGIGPQVLFLGQVPDARRYFKAFDVFALSSDHEPFGMVLLEAMVAGVPLVATSCGGAKEVVEDVGLLFPLGD
VHSLAHGLVHMAGLDAEQRQDCAKRMLLRLRERFSDHAVRNVFWRLPQVSSLTAGA
>Mature_375_residues
TRSVERHVLQFCHGYDGPFLDCARQYASLFAGKGYRVTTVFLTGAADPDVVADCGSDEVLFMEYSSSAIRGLKLGAIRDL
RKIAATRSFSFCIAHRFKPVYIALLATKLPVIGVHHAFGDYHRRSRKLFANLFRKRLSLLGVSDAVRDDMRSSLPKWSAE
RIQTLYNRIDVEQLQGSQFSAEDARAELGLSASAWIVANVGRLHPDKDQATLLRGFAEALPDLPENSQLVILGKGRLEED
LKALALELGIGPQVLFLGQVPDARRYFKAFDVFALSSDHEPFGMVLLEAMVAGVPLVATSCGGAKEVVEDVGLLFPLGDV
HSLAHGLVHMAGLDAEQRQDCAKRMLLRLRERFSDHAVRNVFWRLPQVSSLTAGA

Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 41480; Mature: 41349

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRSVERHVLQFCHGYDGPFLDCARQYASLFAGKGYRVTTVFLTGAADPDVVADCGSDEV
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEECCCCCCE
LFMEYSSSAIRGLKLGAIRDLRKIAATRSFSFCIAHRFKPVYIALLATKLPVIGVHHAFG
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHH
DYHRRSRKLFANLFRKRLSLLGVSDAVRDDMRSSLPKWSAERIQTLYNRIDVEQLQGSQF
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHCCCCC
SAEDARAELGLSASAWIVANVGRLHPDKDQATLLRGFAEALPDLPENSQLVILGKGRLEE
CHHHHHHHCCCCCCHHHEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHH
DLKALALELGIGPQVLFLGQVPDARRYFKAFDVFALSSDHEPFGMVLLEAMVAGVPLVAT
HHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCCEEE
SCGGAKEVVEDVGLLFPLGDVHSLAHGLVHMAGLDAEQRQDCAKRMLLRLRERFSDHAVR
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NVFWRLPQVSSLTAGA
HHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TRSVERHVLQFCHGYDGPFLDCARQYASLFAGKGYRVTTVFLTGAADPDVVADCGSDEV
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCEECCCCCCE
LFMEYSSSAIRGLKLGAIRDLRKIAATRSFSFCIAHRFKPVYIALLATKLPVIGVHHAFG
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHH
DYHRRSRKLFANLFRKRLSLLGVSDAVRDDMRSSLPKWSAERIQTLYNRIDVEQLQGSQF
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHCCCCC
SAEDARAELGLSASAWIVANVGRLHPDKDQATLLRGFAEALPDLPENSQLVILGKGRLEE
CHHHHHHHCCCCCCHHHEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHH
DLKALALELGIGPQVLFLGQVPDARRYFKAFDVFALSSDHEPFGMVLLEAMVAGVPLVAT
HHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCCEEE
SCGGAKEVVEDVGLLFPLGDVHSLAHGLVHMAGLDAEQRQDCAKRMLLRLRERFSDHAVR
CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
NVFWRLPQVSSLTAGA
HHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]