Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is nolO [H]
Identifier: 66043795
GI number: 66043795
Start: 595978
End: 597735
Strand: Direct
Name: nolO [H]
Synonym: Psyr_0528
Alternate gene names: 66043795
Gene position: 595978-597735 (Clockwise)
Preceding gene: 66043793
Following gene: 66043796
Centisome position: 9.78
GC content: 59.84
Gene sequence:
>1758_bases GTGGCATTGACGATCCTTGGCCTGTCCGGCGCCCTTAGCCATGATCCTTCCGCAGCGCTTTACATCGACGGCAAGCTGAT AGCAGCGGCCGAAGAAGAGCGCTTCGTTCGTGACAAGCACGCAAAGAACCGCATGCCCTACGAGTCGGCGAAGTTCTGTC TGGAGCAGGCAGGCATCAAGCCTTCGGACGTCGACGTGGTCGCGATTCCGTTCGCCCCGATCAGCCTGTTCGGCAAGGCC CGCTGGCATTACGCCAAGCGTTACTGGTACGCACCGGATCGCGCCCTCGATGCGCTGCTGATGGGCAATCGCCGTTACAA GCGCTACCGCAACAAGATTGTCTGGTGCCTCGAGCAACTGGGCTTCGATCCGAAAAAGATCAAGATCGAGCCGGTCGAGC ATCACCTGGCCCACGCTTCCAGCGCCTACCACTGCTCCGGTTTCACCGAAAAAACCGCGATCATGGGCATCGACGGCAAG GGTGAGTACGCCACGACCTTCTTCGGCTATGGCGAGAACGGCAAGATCCACAAGATCAAGGAATTCTTCGATCCGGACTC GCTGGGCGGCCTGTACGGCGCGATCACCGAGTTCCTCGGTTTCGAGATGCTCGACGGCGAATTCAAGGTCATGGGCATGG CGCCGTATGGAGATGCCAGCAAGTATGACTTTTCGCGTCTGGCGACCTTTGAGAATGGCGAGCTGGTCATCAATACCGAA CTGGCCAACGTTATTGGGCTGCGTCGCTACAAAGAGAACGGCAAGGGCTTCTATTTCTCGCCAAAGCTGATCGAGTGGCT CGGCCCGAAACGCGTTGGCGATGTGGCCGACGAACCCTACATTCACTACGCCGCGAGCATGCAGGCGCTGTTCGAAAAGC TCGCGCTGCAGATGATGGATCACTACCTGGGTGACATCCTCAAGGAAACCGGCAAGATCGCTTTCGCCGGTGGTTGTGCG CTGAACGTCAAGCTGAACCAGCGCATCATCGCCCGTCCTGAAGTCAAGGAACTGTTCGTGCAACCTGCGTCCGGCGATGC CGGTACGGCGGTGGGCGCTGCGGCTTATGTCTCGCACGCCCGCGGTGTGCCGGTCGAGAAGATGGAACACGTCTACCTCG GCCCTGCGTACAGCAACGAAGATGTAATTGCGGCCTGTGCCCGTCACCCGAGCAAGCCGGTCTGGCGCCAGATCGACAAC ACGCCGGAGCGGATTGCCGAAATCATGGTCAAGGGCAACCCGGTTGCCTGGTTCCAGGGGCGTATGGAGTTCGGTCCGCG CGCGCTGGGCGGCCGCTCGATCATCGGTTGCCCGAGCGTGACCGGCGTGGCCGACCGTATCAACCATCAGATCAAGTTCC GCGAGCGCTGGAGGCCTTTCTGCCCGTCGATGCTCGACACCGTCGCCCCGCAGATGATCAAGATCGATCACCCGGCGCCA TTCATGACCTTCACCTTCGAAGTGGCGGAAGAGTGGAAAACCCGCGTTCCGGAAGTCGTCCATGAAGACGGCACCTCCCG TGCCCAGGTGCTCAAGCGCGAATACAACCCGCGCTATTACGACATGATGAAAGCGCTGGAAAACCTGACCGGCAATGGCG TGTCCCTGAACACCTCGCTGAACCGCCGTGGTGAGCCGATGATCTGCTCGCCGACCGATGCGCTGAACATGTTCTTCGGC TCGGACCTCGAGTACCTGATCATGGAAGACATCCTGGTGGTAAAAGAGGGCGTCGAGGCTTATGACACGCTCGGTTGA
Upstream 100 bases:
>100_bases GTTATAATCCCGCCCTTTAGCTGCCCTCAGCCCGCTGTGCGGGGGCACACCTTTTCCCGGGCGCCCTGCGCCTGCATGCA GACTAAAGAGGCTAGACATA
Downstream 100 bases:
>100_bases ACGACACGTACTGCAGTTCTGTCACGGTTATGACGGGCCGTTTCTGGACTGCGCGCGGCAATACGCCAGCCTGTTCGCCG GCAAGGGCTATCGGGTCACG
Product: carbamoyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 585; Mature: 584
Protein sequence:
>585_residues MALTILGLSGALSHDPSAALYIDGKLIAAAEEERFVRDKHAKNRMPYESAKFCLEQAGIKPSDVDVVAIPFAPISLFGKA RWHYAKRYWYAPDRALDALLMGNRRYKRYRNKIVWCLEQLGFDPKKIKIEPVEHHLAHASSAYHCSGFTEKTAIMGIDGK GEYATTFFGYGENGKIHKIKEFFDPDSLGGLYGAITEFLGFEMLDGEFKVMGMAPYGDASKYDFSRLATFENGELVINTE LANVIGLRRYKENGKGFYFSPKLIEWLGPKRVGDVADEPYIHYAASMQALFEKLALQMMDHYLGDILKETGKIAFAGGCA LNVKLNQRIIARPEVKELFVQPASGDAGTAVGAAAYVSHARGVPVEKMEHVYLGPAYSNEDVIAACARHPSKPVWRQIDN TPERIAEIMVKGNPVAWFQGRMEFGPRALGGRSIIGCPSVTGVADRINHQIKFRERWRPFCPSMLDTVAPQMIKIDHPAP FMTFTFEVAEEWKTRVPEVVHEDGTSRAQVLKREYNPRYYDMMKALENLTGNGVSLNTSLNRRGEPMICSPTDALNMFFG SDLEYLIMEDILVVKEGVEAYDTLG
Sequences:
>Translated_585_residues MALTILGLSGALSHDPSAALYIDGKLIAAAEEERFVRDKHAKNRMPYESAKFCLEQAGIKPSDVDVVAIPFAPISLFGKA RWHYAKRYWYAPDRALDALLMGNRRYKRYRNKIVWCLEQLGFDPKKIKIEPVEHHLAHASSAYHCSGFTEKTAIMGIDGK GEYATTFFGYGENGKIHKIKEFFDPDSLGGLYGAITEFLGFEMLDGEFKVMGMAPYGDASKYDFSRLATFENGELVINTE LANVIGLRRYKENGKGFYFSPKLIEWLGPKRVGDVADEPYIHYAASMQALFEKLALQMMDHYLGDILKETGKIAFAGGCA LNVKLNQRIIARPEVKELFVQPASGDAGTAVGAAAYVSHARGVPVEKMEHVYLGPAYSNEDVIAACARHPSKPVWRQIDN TPERIAEIMVKGNPVAWFQGRMEFGPRALGGRSIIGCPSVTGVADRINHQIKFRERWRPFCPSMLDTVAPQMIKIDHPAP FMTFTFEVAEEWKTRVPEVVHEDGTSRAQVLKREYNPRYYDMMKALENLTGNGVSLNTSLNRRGEPMICSPTDALNMFFG SDLEYLIMEDILVVKEGVEAYDTLG >Mature_584_residues ALTILGLSGALSHDPSAALYIDGKLIAAAEEERFVRDKHAKNRMPYESAKFCLEQAGIKPSDVDVVAIPFAPISLFGKAR WHYAKRYWYAPDRALDALLMGNRRYKRYRNKIVWCLEQLGFDPKKIKIEPVEHHLAHASSAYHCSGFTEKTAIMGIDGKG EYATTFFGYGENGKIHKIKEFFDPDSLGGLYGAITEFLGFEMLDGEFKVMGMAPYGDASKYDFSRLATFENGELVINTEL ANVIGLRRYKENGKGFYFSPKLIEWLGPKRVGDVADEPYIHYAASMQALFEKLALQMMDHYLGDILKETGKIAFAGGCAL NVKLNQRIIARPEVKELFVQPASGDAGTAVGAAAYVSHARGVPVEKMEHVYLGPAYSNEDVIAACARHPSKPVWRQIDNT PERIAEIMVKGNPVAWFQGRMEFGPRALGGRSIIGCPSVTGVADRINHQIKFRERWRPFCPSMLDTVAPQMIKIDHPAPF MTFTFEVAEEWKTRVPEVVHEDGTSRAQVLKREYNPRYYDMMKALENLTGNGVSLNTSLNRRGEPMICSPTDALNMFFGS DLEYLIMEDILVVKEGVEAYDTLG
Specific function: Involved in the O-carbamoylation of nod factors [H]
COG id: COG2192
COG function: function code O; Predicted carbamoyl transferase, NodU family
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NodU/CmcH family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003696 [H]
Pfam domain/function: PF02543 CmcH_NodU [H]
EC number: NA
Molecular weight: Translated: 65508; Mature: 65377
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTILGLSGALSHDPSAALYIDGKLIAAAEEERFVRDKHAKNRMPYESAKFCLEQAGIK CEEEEEECCCCCCCCCCEEEEECCEEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC PSDVDVVAIPFAPISLFGKARWHYAKRYWYAPDRALDALLMGNRRYKRYRNKIVWCLEQL CCCCCEEEECCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH GFDPKKIKIEPVEHHLAHASSAYHCSGFTEKTAIMGIDGKGEYATTFFGYGENGKIHKIK CCCCCEEEEEHHHHHHHHCCCCEEECCCCCCEEEEEECCCCCEEEEEEEECCCCCEEHHH EFFDPDSLGGLYGAITEFLGFEMLDGEFKVMGMAPYGDASKYDFSRLATFENGELVINTE HHCCCCCCCHHHHHHHHHHCCEEECCCEEEEEECCCCCCCCCCHHHHEEECCCCEEEEEH LANVIGLRRYKENGKGFYFSPKLIEWLGPKRVGDVADEPYIHYAASMQALFEKLALQMMD HHHHHHHHHHHCCCCEEEECHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH HYLGDILKETGKIAFAGGCALNVKLNQRIIARPEVKELFVQPASGDAGTAVGAAAYVSHA HHHHHHHHHCCCEEEECCEEEEEEECCEEECCCCHHHHEEECCCCCCCCHHHHHHHHHHH RGVPVEKMEHVYLGPAYSNEDVIAACARHPSKPVWRQIDNTPERIAEIMVKGNPVAWFQG CCCCHHHHCEEEECCCCCCCHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHCCCCEEEEEC RMEFGPRALGGRSIIGCPSVTGVADRINHQIKFRERWRPFCPSMLDTVAPQMIKIDHPAP CCCCCCCCCCCCCEECCCCCCHHHHHHCCCEEEHHHCCCCCHHHHHHCCCCEEEECCCCC FMTFTFEVAEEWKTRVPEVVHEDGTSRAQVLKREYNPRYYDMMKALENLTGNGVSLNTSL CEEEEHHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECCC NRRGEPMICSPTDALNMFFGSDLEYLIMEDILVVKEGVEAYDTLG CCCCCCEEECCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHCCC >Mature Secondary Structure ALTILGLSGALSHDPSAALYIDGKLIAAAEEERFVRDKHAKNRMPYESAKFCLEQAGIK EEEEEECCCCCCCCCCEEEEECCEEEEECHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC PSDVDVVAIPFAPISLFGKARWHYAKRYWYAPDRALDALLMGNRRYKRYRNKIVWCLEQL CCCCCEEEECCCCHHHHHHHHHHHHHHEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH GFDPKKIKIEPVEHHLAHASSAYHCSGFTEKTAIMGIDGKGEYATTFFGYGENGKIHKIK CCCCCEEEEEHHHHHHHHCCCCEEECCCCCCEEEEEECCCCCEEEEEEEECCCCCEEHHH EFFDPDSLGGLYGAITEFLGFEMLDGEFKVMGMAPYGDASKYDFSRLATFENGELVINTE HHCCCCCCCHHHHHHHHHHCCEEECCCEEEEEECCCCCCCCCCHHHHEEECCCCEEEEEH LANVIGLRRYKENGKGFYFSPKLIEWLGPKRVGDVADEPYIHYAASMQALFEKLALQMMD HHHHHHHHHHHCCCCEEEECHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH HYLGDILKETGKIAFAGGCALNVKLNQRIIARPEVKELFVQPASGDAGTAVGAAAYVSHA HHHHHHHHHCCCEEEECCEEEEEEECCEEECCCCHHHHEEECCCCCCCCHHHHHHHHHHH RGVPVEKMEHVYLGPAYSNEDVIAACARHPSKPVWRQIDNTPERIAEIMVKGNPVAWFQG CCCCHHHHCEEEECCCCCCCHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHCCCCEEEEEC RMEFGPRALGGRSIIGCPSVTGVADRINHQIKFRERWRPFCPSMLDTVAPQMIKIDHPAP CCCCCCCCCCCCCEECCCCCCHHHHHHCCCEEEHHHCCCCCHHHHHHCCCCEEEECCCCC FMTFTFEVAEEWKTRVPEVVHEDGTSRAQVLKREYNPRYYDMMKALENLTGNGVSLNTSL CEEEEHHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEECCC NRRGEPMICSPTDALNMFFGSDLEYLIMEDILVVKEGVEAYDTLG CCCCCCEEECCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]