Definition | Pseudomonas syringae pv. syringae B728a, complete genome. |
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Accession | NC_007005 |
Length | 6,093,698 |
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The map label for this gene is 66043709
Identifier: 66043709
GI number: 66043709
Start: 479613
End: 481289
Strand: Direct
Name: 66043709
Synonym: Psyr_0442
Alternate gene names: NA
Gene position: 479613-481289 (Clockwise)
Preceding gene: 66043707
Following gene: 66043710
Centisome position: 7.87
GC content: 63.33
Gene sequence:
>1677_bases ATGACAACAACAACTTCCCCCGACGCACGCTGGACACGTCGTCGCAGCGAGAAGCAGCGGCGTCTGCAGCAAGTACGGGC GTTGGCCGACGGTGTGGTGTTGCCGACCGACAACATCGTTGCGGCGCTGGAGGCCCTGCTGGTTTCCGGCGACCGCGTGG TGCTTGAAGGCAACAACCAGAAGCAGGCGGACTTCCTCTCCCGCGCGCTGGCCAAAGTCGATCCGGGCAAGGTGCATGAC CTGCACATGATCATGCCGAGCGTCGGCCGCGCCGAGCACCTGGACCTGTTCGAGCAGGGCATTGCGCGCAAGCTGGACTT CTCGTTCGCCGGTACGCAAAGCTTGCGCATCAGTCAGTTGCTGGAAGACGGCCTGCTGGAAATCGGTGCGATCCACACCT ACATCGAACTCTATTCACGGCTGGTAGTGGACCTGATCCCCAACGTGGTGCTGGCGGCAGGCTTCATGGCCGACCGCGCC GGCAACATCTACACCGGACCCAGCACCGAAGACACCCCCGCACTCATCGAACCGGCGGCATTCAGCGACGGCATCGTCAT TGTCCAGGTCAATCAACTGGTCGATGACGTCAGCGAGCTGCCACGCGTGGACATCCCGGCCTCGTGGGTCGACTTTGTGG TGGTCGCCGACAAGCCGTTCTATATCGAACCGCTGTTCACCCGCGACCCGCGCCACATCAAGCCGGTGCATGTGTTGATG GCGATGATGGCGATTCGCGGCATCTACGAGAAACACAACGTCCAGTCGTTGAACCACGGCATCGGTTTCAATACCGCCGC CATTGAGCTGATTTTGCCGACCTACGGCGAGTCGCTGGGCCTGAAGGGCAAGATCTGCCGCAACTGGACACTCAATCCGC ACCCGACGCTGATCCCGGCCATCGAAAGCGGCTGGGTCGAGAGCGTGCATTGTTTCGGCACCGAGCTGGGCATGGAAAAT TACATCGCCGCCCGCCCGGACGTGTTCTTCACCGGACGCGACGGCTCGCTGCGTTCCAACCGCCAGCTCTGCCAACTGGC CGGGCAGTACGCGGTGGACCTGTTCATCGGTGCAACCTTGCAGGTCGATGGCGACGGACATTCCTCGACGGTAACCCGTG GTCGTCTGGCCGGCTTTGGTGGCGCGCCGAACATGGGCCACGACCCACGCGGCCGGCGTCATGCCACGCCCGCCTGGCTC GACATGCGTCAGCAGCACGATGACGGCCCGGCTGCCTACCTGGAGCGCGGCAAGAAACTGGTGGTGCAGATGGTCGAGAC GTTCCAGGAGGGTGGCAAACCGACCTTCGTCGAAACCCTGGACGCCGTCGAGGTGGCGAAGAAAAGCGGCATGCCGCTGG CGCCGATCATGATCTACGGCGACGACGTGACCCACCTGCTGACCGAAGAAGGCATCGCCTACCTCTACAAGGCACGCAGC CTTGAGGAACGCCAGGCGATGATCGCGGCGGTGGCGGGCGTGACCGTGATCGGTTTGCGCCACAACCCCAAGGACACCGC GCGCATGCGCCGTGAAGGGCTGATCGCGTTGCCCGAAGACCTCGGGATCCGCCGCACCGATGCCAGCCGTGAACTGCTGG CCGCCAAGAGCATTGCCGACCTGGTTCAGTGGTCCGGTGGCCTCTACAACCCGCCTGCCAAATTCAGGAGCTGGTAA
Upstream 100 bases:
>100_bases GCTTTTTCGCCTGTTTTTGCCTTGTCTTGCCTTCGCTCGTGACGTTTTTACACACCCTGGCTCCTAAGGTGGCCGACGAC AGCAAAATCGTGGAGCGATC
Downstream 100 bases:
>100_bases TGAGCGCACTTCAATGGTCACCGCACCCTGCTTCGCTGGCCGAGCGACTGGCCGATCTGGCGGTCGACGCCTTGATCGAT GAAGCCGACCTGTCACCCAA
Product: malonate decarboxylase, alpha subunit
Products: NA
Alternate protein names: Alpha Subunit Of Malonate Decarboxylase; Malonate Decarboxylase Subunit Alpha; Malonate Decarboxylase Alpha-Subunit; Subunit Alpha Of Malonate Decarboxylase
Number of amino acids: Translated: 558; Mature: 557
Protein sequence:
>558_residues MTTTTSPDARWTRRRSEKQRRLQQVRALADGVVLPTDNIVAALEALLVSGDRVVLEGNNQKQADFLSRALAKVDPGKVHD LHMIMPSVGRAEHLDLFEQGIARKLDFSFAGTQSLRISQLLEDGLLEIGAIHTYIELYSRLVVDLIPNVVLAAGFMADRA GNIYTGPSTEDTPALIEPAAFSDGIVIVQVNQLVDDVSELPRVDIPASWVDFVVVADKPFYIEPLFTRDPRHIKPVHVLM AMMAIRGIYEKHNVQSLNHGIGFNTAAIELILPTYGESLGLKGKICRNWTLNPHPTLIPAIESGWVESVHCFGTELGMEN YIAARPDVFFTGRDGSLRSNRQLCQLAGQYAVDLFIGATLQVDGDGHSSTVTRGRLAGFGGAPNMGHDPRGRRHATPAWL DMRQQHDDGPAAYLERGKKLVVQMVETFQEGGKPTFVETLDAVEVAKKSGMPLAPIMIYGDDVTHLLTEEGIAYLYKARS LEERQAMIAAVAGVTVIGLRHNPKDTARMRREGLIALPEDLGIRRTDASRELLAAKSIADLVQWSGGLYNPPAKFRSW
Sequences:
>Translated_558_residues MTTTTSPDARWTRRRSEKQRRLQQVRALADGVVLPTDNIVAALEALLVSGDRVVLEGNNQKQADFLSRALAKVDPGKVHD LHMIMPSVGRAEHLDLFEQGIARKLDFSFAGTQSLRISQLLEDGLLEIGAIHTYIELYSRLVVDLIPNVVLAAGFMADRA GNIYTGPSTEDTPALIEPAAFSDGIVIVQVNQLVDDVSELPRVDIPASWVDFVVVADKPFYIEPLFTRDPRHIKPVHVLM AMMAIRGIYEKHNVQSLNHGIGFNTAAIELILPTYGESLGLKGKICRNWTLNPHPTLIPAIESGWVESVHCFGTELGMEN YIAARPDVFFTGRDGSLRSNRQLCQLAGQYAVDLFIGATLQVDGDGHSSTVTRGRLAGFGGAPNMGHDPRGRRHATPAWL DMRQQHDDGPAAYLERGKKLVVQMVETFQEGGKPTFVETLDAVEVAKKSGMPLAPIMIYGDDVTHLLTEEGIAYLYKARS LEERQAMIAAVAGVTVIGLRHNPKDTARMRREGLIALPEDLGIRRTDASRELLAAKSIADLVQWSGGLYNPPAKFRSW >Mature_557_residues TTTTSPDARWTRRRSEKQRRLQQVRALADGVVLPTDNIVAALEALLVSGDRVVLEGNNQKQADFLSRALAKVDPGKVHDL HMIMPSVGRAEHLDLFEQGIARKLDFSFAGTQSLRISQLLEDGLLEIGAIHTYIELYSRLVVDLIPNVVLAAGFMADRAG NIYTGPSTEDTPALIEPAAFSDGIVIVQVNQLVDDVSELPRVDIPASWVDFVVVADKPFYIEPLFTRDPRHIKPVHVLMA MMAIRGIYEKHNVQSLNHGIGFNTAAIELILPTYGESLGLKGKICRNWTLNPHPTLIPAIESGWVESVHCFGTELGMENY IAARPDVFFTGRDGSLRSNRQLCQLAGQYAVDLFIGATLQVDGDGHSSTVTRGRLAGFGGAPNMGHDPRGRRHATPAWLD MRQQHDDGPAAYLERGKKLVVQMVETFQEGGKPTFVETLDAVEVAKKSGMPLAPIMIYGDDVTHLLTEEGIAYLYKARSL EERQAMIAAVAGVTVIGLRHNPKDTARMRREGLIALPEDLGIRRTDASRELLAAKSIADLVQWSGGLYNPPAKFRSW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61386; Mature: 61255
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTTSPDARWTRRRSEKQRRLQQVRALADGVVLPTDNIVAALEALLVSGDRVVLEGNNQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEECCCC KQADFLSRALAKVDPGKVHDLHMIMPSVGRAEHLDLFEQGIARKLDFSFAGTQSLRISQL HHHHHHHHHHHHCCCCCCEEHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH LEDGLLEIGAIHTYIELYSRLVVDLIPNVVLAAGFMADRAGNIYTGPSTEDTPALIEPAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCEECCCC FSDGIVIVQVNQLVDDVSELPRVDIPASWVDFVVVADKPFYIEPLFTRDPRHIKPVHVLM CCCCEEEEEHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCHHHHHH AMMAIRGIYEKHNVQSLNHGIGFNTAAIELILPTYGESLGLKGKICRNWTLNPHPTLIPA HHHHHHHHHHHCCHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCEECCCCCCCCCCEEEC IESGWVESVHCFGTELGMENYIAARPDVFFTGRDGSLRSNRQLCQLAGQYAVDLFIGATL HHCCCHHHHHHHHHHHCHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHEEEEEEEEE QVDGDGHSSTVTRGRLAGFGGAPNMGHDPRGRRHATPAWLDMRQQHDDGPAAYLERGKKL EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH VVQMVETFQEGGKPTFVETLDAVEVAKKSGMPLAPIMIYGDDVTHLLTEEGIAYLYKARS HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH LEERQAMIAAVAGVTVIGLRHNPKDTARMRREGLIALPEDLGIRRTDASRELLAAKSIAD HHHHHHHHHHHHCEEEEEECCCCHHHHHHHHCCCEECCHHCCCCCCCCHHHHHHHHHHHH LVQWSGGLYNPPAKFRSW HHHHCCCCCCCCHHHCCC >Mature Secondary Structure TTTTSPDARWTRRRSEKQRRLQQVRALADGVVLPTDNIVAALEALLVSGDRVVLEGNNQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEEECCCC KQADFLSRALAKVDPGKVHDLHMIMPSVGRAEHLDLFEQGIARKLDFSFAGTQSLRISQL HHHHHHHHHHHHCCCCCCEEHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH LEDGLLEIGAIHTYIELYSRLVVDLIPNVVLAAGFMADRAGNIYTGPSTEDTPALIEPAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCEECCCC FSDGIVIVQVNQLVDDVSELPRVDIPASWVDFVVVADKPFYIEPLFTRDPRHIKPVHVLM CCCCEEEEEHHHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCHHHHHH AMMAIRGIYEKHNVQSLNHGIGFNTAAIELILPTYGESLGLKGKICRNWTLNPHPTLIPA HHHHHHHHHHHCCHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCEECCCCCCCCCCEEEC IESGWVESVHCFGTELGMENYIAARPDVFFTGRDGSLRSNRQLCQLAGQYAVDLFIGATL HHCCCHHHHHHHHHHHCHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHEEEEEEEEE QVDGDGHSSTVTRGRLAGFGGAPNMGHDPRGRRHATPAWLDMRQQHDDGPAAYLERGKKL EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH VVQMVETFQEGGKPTFVETLDAVEVAKKSGMPLAPIMIYGDDVTHLLTEEGIAYLYKARS HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHH LEERQAMIAAVAGVTVIGLRHNPKDTARMRREGLIALPEDLGIRRTDASRELLAAKSIAD HHHHHHHHHHHHCEEEEEECCCCHHHHHHHHCCCEECCHHCCCCCCCCHHHHHHHHHHHH LVQWSGGLYNPPAKFRSW HHHHCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA