| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is ycbL [H]
Identifier: 62390260
GI number: 62390260
Start: 1443257
End: 1443859
Strand: Reverse
Name: ycbL [H]
Synonym: cg1559
Alternate gene names: 62390260
Gene position: 1443859-1443257 (Counterclockwise)
Preceding gene: 62390262
Following gene: 62390259
Centisome position: 43.98
GC content: 54.23
Gene sequence:
>603_bases ATGACTAACGAGCTCACTCTTCACCATATTTCCGTGTCCCAAATGGACAACAATTGCTACCTTTTGGCCGCAAATGGCAA CGGTTTACTCATTGATGCTGCAGATGACGCAGCTGCACTACTTAAATTAGCCGAAGATGCCGGTGTGACCATCACCAAAG TGTTGACCACCCACCGCCACGCAGACCACGTCCGTGCATTGCCGGAGGTTCTCCAGAAGACCGGAGCAACTCACTACGCG CCTTTCCTTGAGGTGCCAGCTTTGCCCTCCGCTGTTGATGTGGAACTGCATCATGGTGATTCAATTGAATTTGAGGGTCA TGTATTCCCTATCAGCATTCTGCGCGGCCACACCCCAGGCGGTGCAGTACTCACCGCTGAGATCGACGGTAAAACTCACC TTTTCGTGGGTGACAGCCTCTTCCCCGGCGGTTTGGGCAAAACCAGCAGCGAAGGCGACTTCGTCCGACTGTTCAACGAT GTCAAAGAGCGCATCTTTGACACCTACGACGATGACAGCATCGTGTGGCCAGGTCACGGCAAGGAAACCACCCTTGGAGC CGAGCGTCCACAGCTGGAAATCTGGTGGGAGCGTCGCTGGTAA
Upstream 100 bases:
>100_bases AGCCAATGCTCAACTGCCCTTCAAAATCGATTTTTGTCGCTTCAAAAAATACACCTTCGAACATAGCATCGAACAAGGTG TTTCCGCTAGTCTGAACCAC
Downstream 100 bases:
>100_bases GCGCTTTTCTCAACCAGGCACTGTTCGAGCAGCGCACCGACAACGTGCTTTCCTGAGAATTTCCTGCAAAAGATGGAAAC CTGCCAACCTCGTCGCCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MTNELTLHHISVSQMDNNCYLLAANGNGLLIDAADDAAALLKLAEDAGVTITKVLTTHRHADHVRALPEVLQKTGATHYA PFLEVPALPSAVDVELHHGDSIEFEGHVFPISILRGHTPGGAVLTAEIDGKTHLFVGDSLFPGGLGKTSSEGDFVRLFND VKERIFDTYDDDSIVWPGHGKETTLGAERPQLEIWWERRW
Sequences:
>Translated_200_residues MTNELTLHHISVSQMDNNCYLLAANGNGLLIDAADDAAALLKLAEDAGVTITKVLTTHRHADHVRALPEVLQKTGATHYA PFLEVPALPSAVDVELHHGDSIEFEGHVFPISILRGHTPGGAVLTAEIDGKTHLFVGDSLFPGGLGKTSSEGDFVRLFND VKERIFDTYDDDSIVWPGHGKETTLGAERPQLEIWWERRW >Mature_199_residues TNELTLHHISVSQMDNNCYLLAANGNGLLIDAADDAAALLKLAEDAGVTITKVLTTHRHADHVRALPEVLQKTGATHYAP FLEVPALPSAVDVELHHGDSIEFEGHVFPISILRGHTPGGAVLTAEIDGKTHLFVGDSLFPGGLGKTSSEGDFVRLFNDV KERIFDTYDDDSIVWPGHGKETTLGAERPQLEIWWERRW
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Escherichia coli, GI1787158, Length=201, Percent_Identity=31.8407960199005, Blast_Score=84, Evalue=7e-18, Organism=Drosophila melanogaster, GI221330176, Length=185, Percent_Identity=29.1891891891892, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 21909; Mature: 21778
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNELTLHHISVSQMDNNCYLLAANGNGLLIDAADDAAALLKLAEDAGVTITKVLTTHRH CCCCEEEEEEEEEECCCCEEEEEECCCEEEEECCCCHHHHHHHHCCCCCEEEEEEHHCCC ADHVRALPEVLQKTGATHYAPFLEVPALPSAVDVELHHGDSIEFEGHVFPISILRGHTPG HHHHHHHHHHHHHCCCCCCCCEEECCCCCCEEEEEEECCCCEEECCEEEEEEEEECCCCC GAVLTAEIDGKTHLFVGDSLFPGGLGKTSSEGDFVRLFNDVKERIFDTYDDDSIVWPGHG CEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCC KETTLGAERPQLEIWWERRW CCCCCCCCCCCEEEEEEECC >Mature Secondary Structure TNELTLHHISVSQMDNNCYLLAANGNGLLIDAADDAAALLKLAEDAGVTITKVLTTHRH CCCEEEEEEEEEECCCCEEEEEECCCEEEEECCCCHHHHHHHHCCCCCEEEEEEHHCCC ADHVRALPEVLQKTGATHYAPFLEVPALPSAVDVELHHGDSIEFEGHVFPISILRGHTPG HHHHHHHHHHHHHCCCCCCCCEEECCCCCCEEEEEEECCCCEEECCEEEEEEEEECCCCC GAVLTAEIDGKTHLFVGDSLFPGGLGKTSSEGDFVRLFNDVKERIFDTYDDDSIVWPGHG CEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECCCC KETTLGAERPQLEIWWERRW CCCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503 [H]