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The map label for this gene is ytfH [H]

Identifier: 62390256

GI number: 62390256

Start: 1438333

End: 1438716

Strand: Reverse

Name: ytfH [H]

Synonym: cg1552

Alternate gene names: 62390256

Gene position: 1438716-1438333 (Counterclockwise)

Preceding gene: 62390258

Following gene: 62390251

Centisome position: 43.83

GC content: 51.56

Gene sequence:

>384_bases
ATGGATATTTCCCCTATTCAGCAACCGGCAAATGTGTTCTCCTCCATGTGTTCTTCACGTGGCGCGTTGCAGCATGTCAC
TGGTCGATGGGGGTCTTTGACAATGGTGGCGCTCAAACGCAGTGATGAACCGATGCGTTTCGCTGAAATTCGCCGAAAAG
TTGAGGGCATTAGTGATCGCATGCTGTCGCAGACATTGGCCCAACTAGAACGTGACGGCATGGTTGATCGAACAGTCCAC
AGCTCCATTCCCCCACACGTGGACTACACACTGACACCTTTGGGCACTAAGCTCGCGGACGCTTTAGTCCTGCTAGTCAG
CACTGTGGAAGCTGAATTGGATCAGGTAGTTAGGGCGCAAGAAATCTACGATAAGCAGCACTAA

Upstream 100 bases:

>100_bases
CTCCATTCGTGTGTGTTTCAAGTACACAACTGAAGATAGCACTATCAAAAAGTAAGTGCAATACTTTTGTTAGAAACTTT
TTAGGGATAGGATTATCGCC

Downstream 100 bases:

>100_bases
CACTCCCGAGCACTTTCCTCGAGAAACACAAAACCGGTGTTCCCCTCAATGCAAAAGGAGGGAAACACCGGTTTTGGTTT
GGTTTTTTTAGCTCACGGTG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MDISPIQQPANVFSSMCSSRGALQHVTGRWGSLTMVALKRSDEPMRFAEIRRKVEGISDRMLSQTLAQLERDGMVDRTVH
SSIPPHVDYTLTPLGTKLADALVLLVSTVEAELDQVVRAQEIYDKQH

Sequences:

>Translated_127_residues
MDISPIQQPANVFSSMCSSRGALQHVTGRWGSLTMVALKRSDEPMRFAEIRRKVEGISDRMLSQTLAQLERDGMVDRTVH
SSIPPHVDYTLTPLGTKLADALVLLVSTVEAELDQVVRAQEIYDKQH
>Mature_127_residues
MDISPIQQPANVFSSMCSSRGALQHVTGRWGSLTMVALKRSDEPMRFAEIRRKVEGISDRMLSQTLAQLERDGMVDRTVH
SSIPPHVDYTLTPLGTKLADALVLLVSTVEAELDQVVRAQEIYDKQH

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=108, Percent_Identity=42.5925925925926, Blast_Score=107, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 14175; Mature: 14175

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDISPIQQPANVFSSMCSSRGALQHVTGRWGSLTMVALKRSDEPMRFAEIRRKVEGISDR
CCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCEEHEEEECCCCCHHHHHHHHHHHHHHHH
MLSQTLAQLERDGMVDRTVHSSIPPHVDYTLTPLGTKLADALVLLVSTVEAELDQVVRAQ
HHHHHHHHHHHCCCHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EIYDKQH
HHHHCCC
>Mature Secondary Structure
MDISPIQQPANVFSSMCSSRGALQHVTGRWGSLTMVALKRSDEPMRFAEIRRKVEGISDR
CCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCEEHEEEECCCCCHHHHHHHHHHHHHHHH
MLSQTLAQLERDGMVDRTVHSSIPPHVDYTLTPLGTKLADALVLLVSTVEAELDQVVRAQ
HHHHHHHHHHHCCCHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EIYDKQH
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]