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The map label for this gene is int1

Identifier: 62390217

GI number: 62390217

Start: 1401649

End: 1402329

Strand: Reverse

Name: int1

Synonym: cg1507

Alternate gene names: NA

Gene position: 1402329-1401649 (Counterclockwise)

Preceding gene: 62390223

Following gene: 62390216

Centisome position: 42.72

GC content: 47.14

Gene sequence:

>681_bases
GTGCGACCTGTAAAAGCACAAACCAACGAGCCCCAAGCACTGCAGGTTGCTGACATTCAACCCTTTCACGCTGTTATTGC
GGCCTCAAAACAATTGACTCTCATCGACGTTGTCGATGTCTGCCTTGGAACAGTGTTGCGAGCATGGGAAGCACTGAGCC
TGCGATGGGTAGACGTGGTGCTTGACGAGGAGCATCCAAGAATCTTTATCCGAGGCACCATTGTCTACAACAAAGAAAAA
GGTAACCACAGACAAGATAAAACAAAAACGACCAGCAGTAGGCGTGTCATTCAGTTGCCAGAAATTGCCTCAGACGTCTT
ACGCAAAAGACATGCACTCTACGCCGAACATCTCGAAATGGTGTTCCCTTCCGCTAGAGGCACATATATTTATGAGTCCA
ATTTCAACAAATTGTTGCGAAAACACCGAAAGGGTACTGCATATGATTGGGTGACCGTGCACAGCATCAGGAAAACCCTT
GCATCAATTGTCTCTGAGAACCTTGATTCCAAGGCCGCATCAGACGTACTCGGCCATGCTGACTCACGACTCACAGAACG
GGTCTACATCGCTAAAACTGACAAAGACGTTCCGATTGGTGATGTCGTCAACCAAGCGCTCAAAGAGGCACGAAAAGTCT
CCAAAAAGTCTCCAAATAAAGAAGCTAAAGAAGAAGAATAG

Upstream 100 bases:

>100_bases
CTTCATTCCTGTAACGGTCATAATGCCCTTTTCTCACGACAAATCTGAACTCGGTGGGGAAACCCCCTACGGGCTTGTAC
ATGTTAACCCTATGGCTGAA

Downstream 100 bases:

>100_bases
ACGCAATAGTTGCATTTTTAGTTAACATCGAGCTGCAACAACAGCAATAAACACTCAATTACATGACAGAAATGATCTGG
TCTCACTCCCGTCCAGTGTG

Product: phage-type integrase

Products: NA

Alternate protein names: Phage Integrase Family Protein; Phage Integrase; Site-Specific Recombinase XerD; Phage-Related Integrase

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MRPVKAQTNEPQALQVADIQPFHAVIAASKQLTLIDVVDVCLGTVLRAWEALSLRWVDVVLDEEHPRIFIRGTIVYNKEK
GNHRQDKTKTTSSRRVIQLPEIASDVLRKRHALYAEHLEMVFPSARGTYIYESNFNKLLRKHRKGTAYDWVTVHSIRKTL
ASIVSENLDSKAASDVLGHADSRLTERVYIAKTDKDVPIGDVVNQALKEARKVSKKSPNKEAKEEE

Sequences:

>Translated_226_residues
MRPVKAQTNEPQALQVADIQPFHAVIAASKQLTLIDVVDVCLGTVLRAWEALSLRWVDVVLDEEHPRIFIRGTIVYNKEK
GNHRQDKTKTTSSRRVIQLPEIASDVLRKRHALYAEHLEMVFPSARGTYIYESNFNKLLRKHRKGTAYDWVTVHSIRKTL
ASIVSENLDSKAASDVLGHADSRLTERVYIAKTDKDVPIGDVVNQALKEARKVSKKSPNKEAKEEE
>Mature_226_residues
MRPVKAQTNEPQALQVADIQPFHAVIAASKQLTLIDVVDVCLGTVLRAWEALSLRWVDVVLDEEHPRIFIRGTIVYNKEK
GNHRQDKTKTTSSRRVIQLPEIASDVLRKRHALYAEHLEMVFPSARGTYIYESNFNKLLRKHRKGTAYDWVTVHSIRKTL
ASIVSENLDSKAASDVLGHADSRLTERVYIAKTDKDVPIGDVVNQALKEARKVSKKSPNKEAKEEE

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25632; Mature: 25632

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPVKAQTNEPQALQVADIQPFHAVIAASKQLTLIDVVDVCLGTVLRAWEALSLRWVDVV
CCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEE
LDEEHPRIFIRGTIVYNKEKGNHRQDKTKTTSSRRVIQLPEIASDVLRKRHALYAEHLEM
ECCCCCEEEEEEEEEEECCCCCCCCHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH
VFPSARGTYIYESNFNKLLRKHRKGTAYDWVTVHSIRKTLASIVSENLDSKAASDVLGHA
HCCCCCCCEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
DSRLTERVYIAKTDKDVPIGDVVNQALKEARKVSKKSPNKEAKEEE
HHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRPVKAQTNEPQALQVADIQPFHAVIAASKQLTLIDVVDVCLGTVLRAWEALSLRWVDVV
CCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEE
LDEEHPRIFIRGTIVYNKEKGNHRQDKTKTTSSRRVIQLPEIASDVLRKRHALYAEHLEM
ECCCCCEEEEEEEEEEECCCCCCCCHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHH
VFPSARGTYIYESNFNKLLRKHRKGTAYDWVTVHSIRKTLASIVSENLDSKAASDVLGHA
HCCCCCCCEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
DSRLTERVYIAKTDKDVPIGDVVNQALKEARKVSKKSPNKEAKEEE
HHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA