| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is 62390183
Identifier: 62390183
GI number: 62390183
Start: 1365804
End: 1366427
Strand: Reverse
Name: 62390183
Synonym: cg1467
Alternate gene names: NA
Gene position: 1366427-1365804 (Counterclockwise)
Preceding gene: 62390184
Following gene: 62390182
Centisome position: 41.62
GC content: 55.13
Gene sequence:
>624_bases TTGCCCCACTGTTTATGGATTTGGGGGCATCATTTGAGGCATCCAATAAAGCACTTGCAAATTTTGTGGAGTCTAAAGAG CAGTGATTTTTCCCGATCCCCCCCTGGCCGCCTAGCGGAAATTATTGATACCGCGTGGCGGTTGGTGGAAACACGTGGCT GGGCGAATGTGAGCATGCGAACCCTGGCCGCGGAGCTAAATATCAAGGCGCCGTCGCTGTACAAGCATGTAAAAACGCGC GAGGATATCGCCGCACACATCGCCACGAAGGCATTTATTCAGCTGGGGCAAAGCCTGCATGAACATTGTGAAAGTGTGGA GGATTTGCTTGCGGAATACCGCTCCATGGCTCGGGAAAATCCAAATATTTACCGGCTTCTCACCAGTTCAGAGTTCCCCC GCGAGCTACTTCCAGAAGGCCTAGAAACTTGGGCAGGAACGCCATTCTACCTGGTCACCGGCCACGATCCGATCAAGGGT CAAGCACTGTGGGCATTCGCGCACGGCATGGCCATCCTGGAAATCGACGCCCGATTCGCCGGCCCCAACAATGGATCCCC CGCGGATGGCGTGTGGGAGATCGGCGCGCGGGCATTTGACACACAAGTATTCGACCAAGGCTGA
Upstream 100 bases:
>100_bases CCCGGGCTGATGGACGGCAACCATTCGTTTGTGCTGGAGCCTGCAGGCGAGAGCACGAAGGTGACGCAGTCGGAGAGTTT TACGGGGATTCTCGGGATGT
Downstream 100 bases:
>100_bases GCAAAAAGGCGCTAAGCTGTGGGGAGATCGCAAGCCCCTATCCGGCCTCTACTAAGCCCCGAAGTTGAAGGGAAACTCCC CCAATGCCGTTTCCAGCACT
Product: TETR-family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; TETR-Family Transcriptional Regulator; Regulatory Protein TetR; TetR Family Transcriptional Repressor
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MPHCLWIWGHHLRHPIKHLQILWSLKSSDFSRSPPGRLAEIIDTAWRLVETRGWANVSMRTLAAELNIKAPSLYKHVKTR EDIAAHIATKAFIQLGQSLHEHCESVEDLLAEYRSMARENPNIYRLLTSSEFPRELLPEGLETWAGTPFYLVTGHDPIKG QALWAFAHGMAILEIDARFAGPNNGSPADGVWEIGARAFDTQVFDQG
Sequences:
>Translated_207_residues MPHCLWIWGHHLRHPIKHLQILWSLKSSDFSRSPPGRLAEIIDTAWRLVETRGWANVSMRTLAAELNIKAPSLYKHVKTR EDIAAHIATKAFIQLGQSLHEHCESVEDLLAEYRSMARENPNIYRLLTSSEFPRELLPEGLETWAGTPFYLVTGHDPIKG QALWAFAHGMAILEIDARFAGPNNGSPADGVWEIGARAFDTQVFDQG >Mature_206_residues PHCLWIWGHHLRHPIKHLQILWSLKSSDFSRSPPGRLAEIIDTAWRLVETRGWANVSMRTLAAELNIKAPSLYKHVKTRE DIAAHIATKAFIQLGQSLHEHCESVEDLLAEYRSMARENPNIYRLLTSSEFPRELLPEGLETWAGTPFYLVTGHDPIKGQ ALWAFAHGMAILEIDARFAGPNNGSPADGVWEIGARAFDTQVFDQG
Specific function: Unknown
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23370; Mature: 23239
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHCLWIWGHHLRHPIKHLQILWSLKSSDFSRSPPGRLAEIIDTAWRLVETRGWANVSMR CCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH TLAAELNIKAPSLYKHVKTREDIAAHIATKAFIQLGQSLHEHCESVEDLLAEYRSMAREN HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PNIYRLLTSSEFPRELLPEGLETWAGTPFYLVTGHDPIKGQALWAFAHGMAILEIDARFA CCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHCCEEEEEEECEEC GPNNGSPADGVWEIGARAFDTQVFDQG CCCCCCCCCCHHHHCCHHHHCHHCCCC >Mature Secondary Structure PHCLWIWGHHLRHPIKHLQILWSLKSSDFSRSPPGRLAEIIDTAWRLVETRGWANVSMR CCEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHH TLAAELNIKAPSLYKHVKTREDIAAHIATKAFIQLGQSLHEHCESVEDLLAEYRSMAREN HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PNIYRLLTSSEFPRELLPEGLETWAGTPFYLVTGHDPIKGQALWAFAHGMAILEIDARFA CCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHCCEEEEEEECEEC GPNNGSPADGVWEIGARAFDTQVFDQG CCCCCCCCCCHHHHCCHHHHCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA