Click here to switch to the map view.

The map label for this gene is tnp10b(ISCg10a)

Identifier: 62389931

GI number: 62389931

Start: 1097186

End: 1097563

Strand: Reverse

Name: tnp10b(ISCg10a)

Synonym: cg1185

Alternate gene names: NA

Gene position: 1097563-1097186 (Counterclockwise)

Preceding gene: 62389932

Following gene: 62389930

Centisome position: 33.43

GC content: 51.85

Gene sequence:

>378_bases
TTGCTTGATGTAGTCGAAGGCCGCAGTGCTGATGCGTTGCGGGCGTGGCTTGCACGCCGAAGCCCAGCATTTCGACACCA
AGTACGCATTGTAACTATGGATGGATTCCAAGGCTATGCCACAACCAGCAAACAACTTCTGCCCGCCGCACGCCGAGTCA
TGGATCCTTTCCACGTGGTACTCCTCGCCGGCGATAAACTCACCCGATGCCGACAACGTTTGCAGCAGGAAAAATACCAC
CGGCGGGGTTTGCATGATGACCCGTTGTATAAGAACCGGAAAACCTTGCTGACCACGCAAAAATGGTTGAGTAAGAAAAA
GCAAAGCGTCTTGATGAGTTGTTTAGCTTTGATAAAGACTACGCGGCACTGCAACTGA

Upstream 100 bases:

>100_bases
CACAAATGATCTCATAACCGATTAAAACATGGTGATGGCTATGTCACCGTCATTGTTAATATGACCAGCCTTCCACCGCG
ATGCCACGTCCCCAGCGAGG

Downstream 100 bases:

>100_bases
TGTGGCAGGCGTATCAAGGCATTATTGACTGATACAACATGGCCGATAAACGCCGCGCAAAGACCATGATGCGCGAGATT
GTTGACCAGATGCGGCTACT

Product: transposase

Products: NA

Alternate protein names: Transposase Family Protein; Transposase Of; ISL3 Family Transposase

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MLDVVEGRSADALRAWLARRSPAFRHQVRIVTMDGFQGYATTSKQLLPAARRVMDPFHVVLLAGDKLTRCRQRLQQEKYH
RRGLHDDPLYKNRKTLLTTQKWLSKKKQSVLMSCLALIKTTRHCN

Sequences:

>Translated_125_residues
MLDVVEGRSADALRAWLARRSPAFRHQVRIVTMDGFQGYATTSKQLLPAARRVMDPFHVVLLAGDKLTRCRQRLQQEKYH
RRGLHDDPLYKNRKTLLTTQKWLSKKKQSVLMSCLALIKTTRHCN
>Mature_125_residues
MLDVVEGRSADALRAWLARRSPAFRHQVRIVTMDGFQGYATTSKQLLPAARRVMDPFHVVLLAGDKLTRCRQRLQQEKYH
RRGLHDDPLYKNRKTLLTTQKWLSKKKQSVLMSCLALIKTTRHCN

Specific function: Unknown

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14543; Mature: 14543

Theoretical pI: Translated: 11.41; Mature: 11.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDVVEGRSADALRAWLARRSPAFRHQVRIVTMDGFQGYATTSKQLLPAARRVMDPFHVV
CCCCCCCCCHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCCHHHHHHHHHHHCCHHHEE
LLAGDKLTRCRQRLQQEKYHRRGLHDDPLYKNRKTLLTTQKWLSKKKQSVLMSCLALIKT
EECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRHCN
HHCCC
>Mature Secondary Structure
MLDVVEGRSADALRAWLARRSPAFRHQVRIVTMDGFQGYATTSKQLLPAARRVMDPFHVV
CCCCCCCCCHHHHHHHHHHCCCCHHHEEEEEEECCCCCCCCCHHHHHHHHHHHCCHHHEE
LLAGDKLTRCRQRLQQEKYHRRGLHDDPLYKNRKTLLTTQKWLSKKKQSVLMSCLALIKT
EECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRHCN
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA