Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
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Accession | NC_006958 |
Length | 3,282,708 |
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The map label for this gene is menA [H]
Identifier: 62389348
GI number: 62389348
Start: 471911
End: 472807
Strand: Reverse
Name: menA [H]
Synonym: cg0531
Alternate gene names: 62389348
Gene position: 472807-471911 (Counterclockwise)
Preceding gene: 62389350
Following gene: 62389346
Centisome position: 14.4
GC content: 58.86
Gene sequence:
>897_bases ATGTCTCACACGGAACCCCAGCCGAATTCTGTAACTTTGTCCGATTGGATTCAAGGCGCACGCCCGCGTACCTGGGCAAA TGCGTTCGCGCCTGTCATTGCCGGTTCAGGTGTCGCCGCTTTTCATGATGGTTTTGTGTGGTGGAAGGCCTTGCTGGCGC TTGTCGTGGCGTGGGCTTTGATCATCGGTGTGAATTACGCCAATGATTACTCTGATGGCATTCGTGGCACCGATGAAGAC CGCACCGGTCCTCTGCGACTCACTGGTTCTGGGTTGGCTGAGCCGAAGAAAGTGAAAGCTGCGGCGTTTATTTCTTTCGG TATCGCAGGTGTCGCCGGCACCGCGCTGAGCCTGTTGAGCGCGTGGTGGCTGATCCTCATCGGCATCCTGTGTGTGCTGG GCGCGTGGTTCTACACCGGCGGTAAAAATCCTTATGGTTACCGCGGGCTCGGCGAGATTGCTGTGTTCATCTTCTTCGGC CTCGTCGCGGTCATGGGAACGCAGTTCACCCAAACCGGTTCCGTCAGCTGGGCCGGTTTGGCCGCCGCAGTTGGCGTGGG GTCGATGTCTGCTGGCGTGAACTTGGCCAACAATATTCGCGATATTCCAACCGATAGCAAGACCGGAAAAATTACCCTCG CGGTCCGCCTGGGCGATGCGGGTGCTCGTAAGCTGTTCCTCGCGCTGATTTCCACGCCGTTCATCATGTCCATCTGCCTG GCGTTTGTCGCCTGGCCAGCGCTGATCGCGATCATCGTTTTCCCGCTGGCACTGAAAGCCGCAGGGCCGATCCGCAACAA CGCCACCGGCAAGGATCTCATCCCCGTCATCGGCTCAACAGGGCGCGCCATGGCGTTGTGGGCCGTGCTCACGGGCCTGG CATTAGCGTTTAGCTAA
Upstream 100 bases:
>100_bases TCTATTCATTTCACAATAGCGTTTCACACTCCCCCATAGCCTGCCGAACGTATTTCAAGCAATTGCGCGATCGAGTATGT GATGGGGAAAGATAGAGGTT
Downstream 100 bases:
>100_bases AACGCTTTTCGACGCTCCCCTCCCCTTTCCTCTCGCTTCCGCAAAGAACGAGGGGAATTTTTTAGCGGTCCGCCAGCTCG CTTCGAACCCATTCCTTGTG
Product: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Products: NA
Alternate protein names: DHNA-octaprenyltransferase [H]
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MSHTEPQPNSVTLSDWIQGARPRTWANAFAPVIAGSGVAAFHDGFVWWKALLALVVAWALIIGVNYANDYSDGIRGTDED RTGPLRLTGSGLAEPKKVKAAAFISFGIAGVAGTALSLLSAWWLILIGILCVLGAWFYTGGKNPYGYRGLGEIAVFIFFG LVAVMGTQFTQTGSVSWAGLAAAVGVGSMSAGVNLANNIRDIPTDSKTGKITLAVRLGDAGARKLFLALISTPFIMSICL AFVAWPALIAIIVFPLALKAAGPIRNNATGKDLIPVIGSTGRAMALWAVLTGLALAFS
Sequences:
>Translated_298_residues MSHTEPQPNSVTLSDWIQGARPRTWANAFAPVIAGSGVAAFHDGFVWWKALLALVVAWALIIGVNYANDYSDGIRGTDED RTGPLRLTGSGLAEPKKVKAAAFISFGIAGVAGTALSLLSAWWLILIGILCVLGAWFYTGGKNPYGYRGLGEIAVFIFFG LVAVMGTQFTQTGSVSWAGLAAAVGVGSMSAGVNLANNIRDIPTDSKTGKITLAVRLGDAGARKLFLALISTPFIMSICL AFVAWPALIAIIVFPLALKAAGPIRNNATGKDLIPVIGSTGRAMALWAVLTGLALAFS >Mature_297_residues SHTEPQPNSVTLSDWIQGARPRTWANAFAPVIAGSGVAAFHDGFVWWKALLALVVAWALIIGVNYANDYSDGIRGTDEDR TGPLRLTGSGLAEPKKVKAAAFISFGIAGVAGTALSLLSAWWLILIGILCVLGAWFYTGGKNPYGYRGLGEIAVFIFFGL VAVMGTQFTQTGSVSWAGLAAAVGVGSMSAGVNLANNIRDIPTDSKTGKITLAVRLGDAGARKLFLALISTPFIMSICLA FVAWPALIAIIVFPLALKAAGPIRNNATGKDLIPVIGSTGRAMALWAVLTGLALAFS
Specific function: Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to dimethylmenaquinone (DMK). Attaches octaprenylpyrophosphate, a membrane-bound 40-carbon side chain to DHNA. The conversion of DHNA to DMK proceeds in three stages:the removal of the carboxyl group of DHNA
COG id: COG1575
COG function: function code H; 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the menA family [H]
Homologues:
Organism=Homo sapiens, GI7019551, Length=278, Percent_Identity=25.1798561151079, Blast_Score=81, Evalue=1e-15, Organism=Escherichia coli, GI1790365, Length=246, Percent_Identity=36.5853658536585, Blast_Score=140, Evalue=8e-35, Organism=Drosophila melanogaster, GI17737429, Length=282, Percent_Identity=24.113475177305, Blast_Score=77, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004657 - InterPro: IPR000537 [H]
Pfam domain/function: PF01040 UbiA [H]
EC number: =2.5.1.74 [H]
Molecular weight: Translated: 31095; Mature: 30963
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHTEPQPNSVTLSDWIQGARPRTWANAFAPVIAGSGVAAFHDGFVWWKALLALVVAWAL CCCCCCCCCCEEHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH IIGVNYANDYSDGIRGTDEDRTGPLRLTGSGLAEPKKVKAAAFISFGIAGVAGTALSLLS HHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AWWLILIGILCVLGAWFYTGGKNPYGYRGLGEIAVFIFFGLVAVMGTQFTQTGSVSWAGL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH AAAVGVGSMSAGVNLANNIRDIPTDSKTGKITLAVRLGDAGARKLFLALISTPFIMSICL HHHHHCCCHHCCCCHHHCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH AFVAWPALIAIIVFPLALKAAGPIRNNATGKDLIPVIGSTGRAMALWAVLTGLALAFS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SHTEPQPNSVTLSDWIQGARPRTWANAFAPVIAGSGVAAFHDGFVWWKALLALVVAWAL CCCCCCCCCEEHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH IIGVNYANDYSDGIRGTDEDRTGPLRLTGSGLAEPKKVKAAAFISFGIAGVAGTALSLLS HHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AWWLILIGILCVLGAWFYTGGKNPYGYRGLGEIAVFIFFGLVAVMGTQFTQTGSVSWAGL HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH AAAVGVGSMSAGVNLANNIRDIPTDSKTGKITLAVRLGDAGARKLFLALISTPFIMSICL HHHHHCCCHHCCCCHHHCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHH AFVAWPALIAIIVFPLALKAAGPIRNNATGKDLIPVIGSTGRAMALWAVLTGLALAFS HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]