Click here to switch to the map view.

The map label for this gene is fbpB [H]

Identifier: 62389327

GI number: 62389327

Start: 449179

End: 450825

Strand: Reverse

Name: fbpB [H]

Synonym: cg0507

Alternate gene names: 62389327

Gene position: 450825-449179 (Counterclockwise)

Preceding gene: 62389328

Following gene: 62389326

Centisome position: 13.73

GC content: 54.28

Gene sequence:

>1647_bases
ATGCAGTTATCTCCTTCAAATACGTCGACGCAGCGCTTTCACATCTCTGCGTTGACGTCTTTGTCTTTCATGCGTCTGGG
TGTGTGGCTGATTGTCGCGGGGTTGTTTATCACTCCGTTGGCGCTGGTGGTGGGCTTGGCGTTGGGAGGCAATCAGTTTC
CTGCTCTGTGGGATTCCGGATTGGGCAAAGCCCTATGGAATTCCGCCTATACAACAGTGCTTTCTGCGGTGGGCGCGACC
ATTATCGGCACGATCATGGCTCTCACGCTGGACCGAACTGATGTTTTCGGGCGCACCGCGTTGCGGTTATTTTTGTTATC
CCCGCTGTTGATCCCTCCGTTTATTGGGGCTATTGCGTGGTTGCAGCTGTTCGGGAAGAACCAGGGCATCAACCGGTTTT
TCGGCACGGAAGTGTGGGATATTTACGGCGCTGATGGTGTGACATTTTTGTTGATTGTGCACTCCTATCCCACTGTGTAC
ATCATTGTTTCGGCAGCTCTGAGGCAACTTCCTAGTGATTTGGAGCAAGCTGCACGGATCGCGGGGGCGGATACTTTTAC
GGTGTTGCGCACCATCACACTCCCACTGCTCAAACCTGCATTGTTGTCGGCGTTTACTCTTACCACAGTGGCGAACCTCG
CCGACTTTGGCATTCCAGCTCTGTTGGGATCGCCAGCGCGTTTTGAAACCTTAGCCACCATGATTTATCGCTTCATGGAA
TCCGGCACCGTGAGCAATCCATTGCAGGTGGTATCCACCATTGGCATCGTGTTGTTGTTCCTGGGAATCGCAGCAGTAAC
CGCGGATTATCTGGTGTCTTTGTACGCGGCATCAAAGTTGCAAGACGCAGGAACACCGCATCGCTTTACTCTCAACAAAT
CACGAATCCCAGTCAGCGTGATCACGTGGATCATCGCGTTGATCATCACCGCCGCCCCGCTGCTGGGTCTGGCATACAGA
GCATTACTGCCTGCCCCAGGTGTGCCGTTCAACCTAGACAACATCACGCTCAACAACTTTGAAGCAGCACTGAGCAATCC
ACGAGTAATCGAAGGATTCAGCAACTCCCTCATGTTATCCCTGGGTGCAGCCCTAATCTGTGGGGTGCTGGGATGGCTGA
TCGGAGTGCTCATCACCCGAACCCAGCATTTCGCCAACGTACCGTTGACACTCACTGTGCTGCTTCCCACCGCACTGCCG
GGCATGATCATCGGCGTCGGCTGGCTCATTTTGGGCAGATACACCGGAATTTACAACACACCTTGGGTGATTTTGGGTGC
ATATGTGTGTGCTTTTACCGCGCTGGTTGTCCAAGCTGTACGCGGACCACTCAGTCAAGCACCCGAAGCAATCGAAGAAG
CCGCACGAATCAGCGGCGCAGGCAGATTACGATCCATCATGGACACCACCGGAGCGATGGCAATTCCCGCAGCTTTCGCC
GGCGCAGTGCTGGTTGCGGTAACTGCGGTTCGAGAGTTAACCGTGTCCATTTTGCTCATCGCGCCGGGCACCACCACCCT
GGGTGTGCAGGTGTTCAATTTGCAGCAGGCGGGAAATTACAATCAGGCATCGGCGTTGTCGTTGATGTTTGCGATTATCG
GTATCGTGGCGCTCGCGTTGACGGTGCGCAGCCAGAAGGAGTTTTAG

Upstream 100 bases:

>100_bases
TTGGCTGACATCGAGCTCATGACCCCTGACCTGGAGGTTGTAACCGCTGATAAGGCGGCTGCTGTTGAGTTCTTCCAAAA
CGCAATGAACTAGTTTTCCT

Downstream 100 bases:

>100_bases
GTGTCATCGATCAAATTGCGCGATTTAAGCGTGAGCTTCCGCGACGGAACCTTCGGGCTGCAAGATATCAATTTGAAAAT
TGAGCCGGAAGAATTTGTGG

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 548; Mature: 548

Protein sequence:

>548_residues
MQLSPSNTSTQRFHISALTSLSFMRLGVWLIVAGLFITPLALVVGLALGGNQFPALWDSGLGKALWNSAYTTVLSAVGAT
IIGTIMALTLDRTDVFGRTALRLFLLSPLLIPPFIGAIAWLQLFGKNQGINRFFGTEVWDIYGADGVTFLLIVHSYPTVY
IIVSAALRQLPSDLEQAARIAGADTFTVLRTITLPLLKPALLSAFTLTTVANLADFGIPALLGSPARFETLATMIYRFME
SGTVSNPLQVVSTIGIVLLFLGIAAVTADYLVSLYAASKLQDAGTPHRFTLNKSRIPVSVITWIIALIITAAPLLGLAYR
ALLPAPGVPFNLDNITLNNFEAALSNPRVIEGFSNSLMLSLGAALICGVLGWLIGVLITRTQHFANVPLTLTVLLPTALP
GMIIGVGWLILGRYTGIYNTPWVILGAYVCAFTALVVQAVRGPLSQAPEAIEEAARISGAGRLRSIMDTTGAMAIPAAFA
GAVLVAVTAVRELTVSILLIAPGTTTLGVQVFNLQQAGNYNQASALSLMFAIIGIVALALTVRSQKEF

Sequences:

>Translated_548_residues
MQLSPSNTSTQRFHISALTSLSFMRLGVWLIVAGLFITPLALVVGLALGGNQFPALWDSGLGKALWNSAYTTVLSAVGAT
IIGTIMALTLDRTDVFGRTALRLFLLSPLLIPPFIGAIAWLQLFGKNQGINRFFGTEVWDIYGADGVTFLLIVHSYPTVY
IIVSAALRQLPSDLEQAARIAGADTFTVLRTITLPLLKPALLSAFTLTTVANLADFGIPALLGSPARFETLATMIYRFME
SGTVSNPLQVVSTIGIVLLFLGIAAVTADYLVSLYAASKLQDAGTPHRFTLNKSRIPVSVITWIIALIITAAPLLGLAYR
ALLPAPGVPFNLDNITLNNFEAALSNPRVIEGFSNSLMLSLGAALICGVLGWLIGVLITRTQHFANVPLTLTVLLPTALP
GMIIGVGWLILGRYTGIYNTPWVILGAYVCAFTALVVQAVRGPLSQAPEAIEEAARISGAGRLRSIMDTTGAMAIPAAFA
GAVLVAVTAVRELTVSILLIAPGTTTLGVQVFNLQQAGNYNQASALSLMFAIIGIVALALTVRSQKEF
>Mature_548_residues
MQLSPSNTSTQRFHISALTSLSFMRLGVWLIVAGLFITPLALVVGLALGGNQFPALWDSGLGKALWNSAYTTVLSAVGAT
IIGTIMALTLDRTDVFGRTALRLFLLSPLLIPPFIGAIAWLQLFGKNQGINRFFGTEVWDIYGADGVTFLLIVHSYPTVY
IIVSAALRQLPSDLEQAARIAGADTFTVLRTITLPLLKPALLSAFTLTTVANLADFGIPALLGSPARFETLATMIYRFME
SGTVSNPLQVVSTIGIVLLFLGIAAVTADYLVSLYAASKLQDAGTPHRFTLNKSRIPVSVITWIIALIITAAPLLGLAYR
ALLPAPGVPFNLDNITLNNFEAALSNPRVIEGFSNSLMLSLGAALICGVLGWLIGVLITRTQHFANVPLTLTVLLPTALP
GMIIGVGWLILGRYTGIYNTPWVILGAYVCAFTALVVQAVRGPLSQAPEAIEEAARISGAGRLRSIMDTTGAMAIPAAFA
GAVLVAVTAVRELTVSILLIAPGTTTLGVQVFNLQQAGNYNQASALSLMFAIIGIVALALTVRSQKEF

Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1178

COG function: function code P; ABC-type Fe3+ transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transmembrane type-1 domains [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=221, Percent_Identity=25.7918552036199, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 58105; Mature: 58105

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLSPSNTSTQRFHISALTSLSFMRLGVWLIVAGLFITPLALVVGLALGGNQFPALWDSG
CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCC
LGKALWNSAYTTVLSAVGATIIGTIMALTLDRTDVFGRTALRLFLLSPLLIPPFIGAIAW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQLFGKNQGINRFFGTEVWDIYGADGVTFLLIVHSYPTVYIIVSAALRQLPSDLEQAARI
HHHHCCCCCCCHHHCCHHHEEECCCCCEEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHH
AGADTFTVLRTITLPLLKPALLSAFTLTTVANLADFGIPALLGSPARFETLATMIYRFME
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHH
SGTVSNPLQVVSTIGIVLLFLGIAAVTADYLVSLYAASKLQDAGTPHRFTLNKSRIPVSV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHH
ITWIIALIITAAPLLGLAYRALLPAPGVPFNLDNITLNNFEAALSNPRVIEGFSNSLMLS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHCCCCEECCCCHHHHHH
LGAALICGVLGWLIGVLITRTQHFANVPLTLTVLLPTALPGMIIGVGWLILGRYTGIYNT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PWVILGAYVCAFTALVVQAVRGPLSQAPEAIEEAARISGAGRLRSIMDTTGAMAIPAAFA
HHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHH
GAVLVAVTAVRELTVSILLIAPGTTTLGVQVFNLQQAGNYNQASALSLMFAIIGIVALAL
HHHHHHHHHHHHHHEEEEEEECCCCEECEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHH
TVRSQKEF
HHHHCCCC
>Mature Secondary Structure
MQLSPSNTSTQRFHISALTSLSFMRLGVWLIVAGLFITPLALVVGLALGGNQFPALWDSG
CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCC
LGKALWNSAYTTVLSAVGATIIGTIMALTLDRTDVFGRTALRLFLLSPLLIPPFIGAIAW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LQLFGKNQGINRFFGTEVWDIYGADGVTFLLIVHSYPTVYIIVSAALRQLPSDLEQAARI
HHHHCCCCCCCHHHCCHHHEEECCCCCEEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHH
AGADTFTVLRTITLPLLKPALLSAFTLTTVANLADFGIPALLGSPARFETLATMIYRFME
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHH
SGTVSNPLQVVSTIGIVLLFLGIAAVTADYLVSLYAASKLQDAGTPHRFTLNKSRIPVSV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHH
ITWIIALIITAAPLLGLAYRALLPAPGVPFNLDNITLNNFEAALSNPRVIEGFSNSLMLS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHCCCCEECCCCHHHHHH
LGAALICGVLGWLIGVLITRTQHFANVPLTLTVLLPTALPGMIIGVGWLILGRYTGIYNT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PWVILGAYVCAFTALVVQAVRGPLSQAPEAIEEAARISGAGRLRSIMDTTGAMAIPAAFA
HHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHH
GAVLVAVTAVRELTVSILLIAPGTTTLGVQVFNLQQAGNYNQASALSLMFAIIGIVALAL
HHHHHHHHHHHHHHEEEEEEECCCCEECEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHHH
TVRSQKEF
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8807793 [H]