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The map label for this gene is 62389236

Identifier: 62389236

GI number: 62389236

Start: 354597

End: 355847

Strand: Reverse

Name: 62389236

Synonym: cg0408

Alternate gene names: NA

Gene position: 355847-354597 (Counterclockwise)

Preceding gene: 62389237

Following gene: 62389235

Centisome position: 10.84

GC content: 56.67

Gene sequence:

>1251_bases
GTGCGCTATCTGACGCTGGCCACAATCATCGCAGGTCTCTCCGGGTTCGTCGTCATCATCATCGCTGCCTGGGCCCTTGG
TGATTCCAGCCAACTTTCCGAAGAATTCACCGCCTACTGGGGTCTGTTCTTTGCAGGAACCGGAGTGCTGACTGGGTTGA
CGCAGGAGACGACCCGCGCGGTGACGGCCGGTTCTCGTGGTGGTTCTCGTGGTGGGCGTGCTGGTTCTGTTGTTGGATTT
AGGCCGTTTTTGTTTAGCTTCGTGGTTGCGGCGATAGTGCTCGTGGTGCTTGGCGCTTCGGCGCCGCTGTGGATCGGCCA
GCTTTTAAGTAATTTGCAAGGTGTTGGTGTTGGGCTACTTGCTGTAGGTCTTGCTAGCTACGCGATCCAAGCGACAATCT
CCGGCATTTTGTCCGGCTGCCAATTGTGGAAAGAGTATGCCTCGCTGATTTCTTTGGACACCGGCGTGCGCATGGTTTTA
GCTGTTGCCGCCTGGTTGCTGGGTTATCAATTGCTGGCGTTCTTGATCATCACCGTTGTGGGATCAATATCCTGGCTGGT
CATCGTGCTGTGCTTCGGTTCGGTGCGTTCCGTTTTGGGATCGGTTGCTGATGTTTCACGGGGCGTTTTCATCCGACAGG
CTCTGCTTGCGATGGCAGCATCCGGCGCCACGGCAGTGCTGATTACTGGTTTCCCGACCCTGCTGAAATTCACGAACCCT
TCAGCGGTTGCAGGAGGGGTTTCGATGGCCGCTGTTTCCTACGCCGTCATCCTGACCCGCGCTCCCCTGCTGGTTCCGCT
GCAGCAATTCCAATCGGCGATCATCGTTCGTTTTGTCAAAGGTACGTCCGGTCCATTGAAAACTTTGGCGGGTCCGTTGG
CAATTGTGTGGGCAGTCGGACTTGTTGGAGCTGGTCTTGCATGGTTAGTTGGCCCATGGATCCTGGACGTTGTACTCCAA
AAGGAACTCTTCGCGGTCCCTGGCTGGCTACTCGCGATGCTCACCTTAGGCGCCACCACCACCGCTTCATTGATGGTGTC
CGGCTGCGCGGCGATCGCCTTTGAACGTCACGGGATCTATCTCACCGGATGGGTTGTTGCCACTGTTGTTGCCGTCGGAT
TCTTGCTGGGACCTTTTGATTTGGGCGTCGCTGCTGGCCTTGCGCTCATTGTTGGCCCACTCTGCGGTTTGCTGGTACAC
ATGGGAGCGTTTGTTGGTGGGGATCGGAATCGGGTTTTGACTGCGGGATAG

Upstream 100 bases:

>100_bases
TCTACGCAGTCTCCACAGACCACGCAGCTTTAGATGCAGTGTGGCAGTCCTGGCTTCGCGATCTGGAGTTGCCGGAGTTT
CCTTCTGGTGGTTTGGACTA

Downstream 100 bases:

>100_bases
TTTGGTTTGATTGGGGGATTTCGATTGCTTAGAAGAGCAAAAGTCCCTGTGAAAAACGTGGTAGTTCAGTTTTACTTTGT
TAAACAAGTTGCTACTATTC

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MRYLTLATIIAGLSGFVVIIIAAWALGDSSQLSEEFTAYWGLFFAGTGVLTGLTQETTRAVTAGSRGGSRGGRAGSVVGF
RPFLFSFVVAAIVLVVLGASAPLWIGQLLSNLQGVGVGLLAVGLASYAIQATISGILSGCQLWKEYASLISLDTGVRMVL
AVAAWLLGYQLLAFLIITVVGSISWLVIVLCFGSVRSVLGSVADVSRGVFIRQALLAMAASGATAVLITGFPTLLKFTNP
SAVAGGVSMAAVSYAVILTRAPLLVPLQQFQSAIIVRFVKGTSGPLKTLAGPLAIVWAVGLVGAGLAWLVGPWILDVVLQ
KELFAVPGWLLAMLTLGATTTASLMVSGCAAIAFERHGIYLTGWVVATVVAVGFLLGPFDLGVAAGLALIVGPLCGLLVH
MGAFVGGDRNRVLTAG

Sequences:

>Translated_416_residues
MRYLTLATIIAGLSGFVVIIIAAWALGDSSQLSEEFTAYWGLFFAGTGVLTGLTQETTRAVTAGSRGGSRGGRAGSVVGF
RPFLFSFVVAAIVLVVLGASAPLWIGQLLSNLQGVGVGLLAVGLASYAIQATISGILSGCQLWKEYASLISLDTGVRMVL
AVAAWLLGYQLLAFLIITVVGSISWLVIVLCFGSVRSVLGSVADVSRGVFIRQALLAMAASGATAVLITGFPTLLKFTNP
SAVAGGVSMAAVSYAVILTRAPLLVPLQQFQSAIIVRFVKGTSGPLKTLAGPLAIVWAVGLVGAGLAWLVGPWILDVVLQ
KELFAVPGWLLAMLTLGATTTASLMVSGCAAIAFERHGIYLTGWVVATVVAVGFLLGPFDLGVAAGLALIVGPLCGLLVH
MGAFVGGDRNRVLTAG
>Mature_416_residues
MRYLTLATIIAGLSGFVVIIIAAWALGDSSQLSEEFTAYWGLFFAGTGVLTGLTQETTRAVTAGSRGGSRGGRAGSVVGF
RPFLFSFVVAAIVLVVLGASAPLWIGQLLSNLQGVGVGLLAVGLASYAIQATISGILSGCQLWKEYASLISLDTGVRMVL
AVAAWLLGYQLLAFLIITVVGSISWLVIVLCFGSVRSVLGSVADVSRGVFIRQALLAMAASGATAVLITGFPTLLKFTNP
SAVAGGVSMAAVSYAVILTRAPLLVPLQQFQSAIIVRFVKGTSGPLKTLAGPLAIVWAVGLVGAGLAWLVGPWILDVVLQ
KELFAVPGWLLAMLTLGATTTASLMVSGCAAIAFERHGIYLTGWVVATVVAVGFLLGPFDLGVAAGLALIVGPLCGLLVH
MGAFVGGDRNRVLTAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv1510 and M.bovis Mb3654 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42693; Mature: 42693

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC
>Mature Secondary Structure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EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]