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The map label for this gene is cgtR1 [H]

Identifier: 62389170

GI number: 62389170

Start: 289128

End: 289796

Strand: Reverse

Name: cgtR1 [H]

Synonym: cg0330

Alternate gene names: 62389170

Gene position: 289796-289128 (Counterclockwise)

Preceding gene: 62389171

Following gene: 62389169

Centisome position: 8.83

GC content: 58.74

Gene sequence:

>669_bases
ATGAGCAAGATCCTGCTCGCTGAAGATGACGCCGGCATCGCAGATTTCATCGTTCGTGGCCTCATCCGCGAAGGCTTCGA
ATGCGAGGTCACCGAATCCGGCGCCGAAGCTTTCGCCCGCGCACATTCCGGCGATTTCGATCTCATGGTTTTAGACCTCG
GCCTCCCCCACATGGACGGCACGGATGTCCTAGAGCAATTAAGAAATCTGCAGGTCACGCTACCTATCATTGTGCTCACG
GCACGCACCAACATCGAGGACCGCCTCCGCACCCTCGAGGGCGGCGCCGACGATTACATGCCCAAACCATTCCAATTCGC
AGAATTACTGGCCCGCATCAAACTCCGCCTCGCCAAACACACTCCTCAGGAAACGCCGACCGATGCGCGCGTGCTACGAA
ACGGCGATTTGGAGCTCGATCTTCGTACCCAGCGTGTGCTCATCGACGGCTCCTGGCACGACCTTTCCCGCCGCGAAGTC
GATCTGCTCGAAACCCTCATGCGACACCCAGGGCAAATCCTCTCCCGAGTCCAACTCCTCCGACTGGTGTGGGACATGGA
TTGGGACCCCGGCTCAAACGTGGTGGACGTATATATCCGCGCGTTGAGGAAGAAAATCGGTGCCCATCGGGTCGAAACCA
TCCGAGGATCTGGCTACCGGCTGCGCTAA

Upstream 100 bases:

>100_bases
GAAGCCCACGGCGGCCGAGCTTTCGTCAATTCCACACCAGGTCTAGGATCCATTTTCGGCCTGGAAATCCCCGCACCAGA
ACAATCAAAGGAATACACCC

Downstream 100 bases:

>100_bases
CTGCAGAACGAGACCAAAAACCTAAAACCTACGCTGTCTTTTGGTTCAGATTTCACATTTCTAGCCCTCCAAAGTGTCGT
ATTGAACCAAAGAGTACAAA

Product: two component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSKILLAEDDAGIADFIVRGLIREGFECEVTESGAEAFARAHSGDFDLMVLDLGLPHMDGTDVLEQLRNLQVTLPIIVLT
ARTNIEDRLRTLEGGADDYMPKPFQFAELLARIKLRLAKHTPQETPTDARVLRNGDLELDLRTQRVLIDGSWHDLSRREV
DLLETLMRHPGQILSRVQLLRLVWDMDWDPGSNVVDVYIRALRKKIGAHRVETIRGSGYRLR

Sequences:

>Translated_222_residues
MSKILLAEDDAGIADFIVRGLIREGFECEVTESGAEAFARAHSGDFDLMVLDLGLPHMDGTDVLEQLRNLQVTLPIIVLT
ARTNIEDRLRTLEGGADDYMPKPFQFAELLARIKLRLAKHTPQETPTDARVLRNGDLELDLRTQRVLIDGSWHDLSRREV
DLLETLMRHPGQILSRVQLLRLVWDMDWDPGSNVVDVYIRALRKKIGAHRVETIRGSGYRLR
>Mature_221_residues
SKILLAEDDAGIADFIVRGLIREGFECEVTESGAEAFARAHSGDFDLMVLDLGLPHMDGTDVLEQLRNLQVTLPIIVLTA
RTNIEDRLRTLEGGADDYMPKPFQFAELLARIKLRLAKHTPQETPTDARVLRNGDLELDLRTQRVLIDGSWHDLSRREVD
LLETLMRHPGQILSRVQLLRLVWDMDWDPGSNVVDVYIRALRKKIGAHRVETIRGSGYRLR

Specific function: Member of the three-protein two-component system HK1/HK2/tcrA [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786784, Length=223, Percent_Identity=37.219730941704, Blast_Score=155, Evalue=1e-39,
Organism=Escherichia coli, GI1790860, Length=228, Percent_Identity=39.9122807017544, Blast_Score=139, Evalue=1e-34,
Organism=Escherichia coli, GI87082012, Length=223, Percent_Identity=35.8744394618834, Blast_Score=134, Evalue=4e-33,
Organism=Escherichia coli, GI1790552, Length=219, Percent_Identity=36.0730593607306, Blast_Score=134, Evalue=5e-33,
Organism=Escherichia coli, GI1789402, Length=219, Percent_Identity=35.6164383561644, Blast_Score=126, Evalue=9e-31,
Organism=Escherichia coli, GI1786599, Length=225, Percent_Identity=36.4444444444444, Blast_Score=120, Evalue=5e-29,
Organism=Escherichia coli, GI1789809, Length=226, Percent_Identity=34.9557522123894, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI1786911, Length=207, Percent_Identity=32.8502415458937, Blast_Score=103, Evalue=7e-24,
Organism=Escherichia coli, GI1787375, Length=221, Percent_Identity=29.8642533936652, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI2367329, Length=228, Percent_Identity=35.0877192982456, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1788394, Length=227, Percent_Identity=31.2775330396476, Blast_Score=97, Evalue=9e-22,
Organism=Escherichia coli, GI1787229, Length=224, Percent_Identity=33.0357142857143, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1790863, Length=228, Percent_Identity=29.8245614035088, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1790299, Length=128, Percent_Identity=28.90625, Blast_Score=77, Evalue=6e-16,
Organism=Escherichia coli, GI145693140, Length=232, Percent_Identity=30.6034482758621, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1790437, Length=128, Percent_Identity=32.03125, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1788550, Length=112, Percent_Identity=30.3571428571429, Blast_Score=64, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25245; Mature: 25114

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKILLAEDDAGIADFIVRGLIREGFECEVTESGAEAFARAHSGDFDLMVLDLGLPHMDG
CCCEEEECCCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCEEEEEECCCCCCCH
TDVLEQLRNLQVTLPIIVLTARTNIEDRLRTLEGGADDYMPKPFQFAELLARIKLRLAKH
HHHHHHHHCCEEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHC
TPQETPTDARVLRNGDLELDLRTQRVLIDGSWHDLSRREVDLLETLMRHPGQILSRVQLL
CCCCCCCHHHHHCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHH
RLVWDMDWDPGSNVVDVYIRALRKKIGAHRVETIRGSGYRLR
HHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SKILLAEDDAGIADFIVRGLIREGFECEVTESGAEAFARAHSGDFDLMVLDLGLPHMDG
CCEEEECCCCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCEEEEEECCCCCCCH
TDVLEQLRNLQVTLPIIVLTARTNIEDRLRTLEGGADDYMPKPFQFAELLARIKLRLAKH
HHHHHHHHCCEEEEEEEEEEECCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHC
TPQETPTDARVLRNGDLELDLRTQRVLIDGSWHDLSRREVDLLETLMRHPGQILSRVQLL
CCCCCCCHHHHHCCCCEEEEEEEEEEEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHHHH
RLVWDMDWDPGSNVVDVYIRALRKKIGAHRVETIRGSGYRLR
HHHHCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230 [H]