Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
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Accession | NC_006958 |
Length | 3,282,708 |
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The map label for this gene is hde [H]
Identifier: 62389013
GI number: 62389013
Start: 130813
End: 131739
Strand: Reverse
Name: hde [H]
Synonym: cg0153
Alternate gene names: 62389013
Gene position: 131739-130813 (Counterclockwise)
Preceding gene: 62389016
Following gene: 62389011
Centisome position: 4.01
GC content: 54.15
Gene sequence:
>927_bases TTGCCTAAGGCTTCTAGGATTGTCGTTATGCTCCTTCACCCAGATGCGCAGTTTTATATCGATACCTTGCCCACTCTCAG CGCGGAGGAGCAGGTGAGTTTTGGTAAAGACGCTCCTGTTTCAGAGGCTGATGCAACCCATGTGGCGACAGATCAAGATA TTGCTGGGGTGCCGGTGAGGGTTTATACGCCTTTATCTGGGGCTGGGGATTTGCCGTGTTTGGTGTACTTCCACGGCGGT GGCTGGTCCGGCGGCACCCTCAACATGATCGATGCCACGGTTCACTCTCTAGTGGTTGGCCTGCCGATCATCGCCATCAG CGTGGACTACCGACTTGCACCCGCACACCCATTTCCAGCGGCTATCGACGACGCGTTTGCAGTGGTCAGTGCCGTATTGG ATGGGGTGTCTGGGCTGAGTATTGATACTTCCCGAGTGGCAATTGGCGGTGACAGTGCCGGTGGAAATATTGCCGCGGTT ACTGCACAACAGCTGCGTGAACGGGCTGTGGGTTCTACTCCTGTATTGGCTCACCAGGTGCTTATTTTTCCGGTAACTGA TGTTTCCACTACATCTACGCCGAGCTATCTCACATTTGGCAAAGATTGCTACCTGACAAAGGACGCGATGGAACGCTACA TCGAACAATATGCCGATGGGCACGACCGCACCGACCCTCGACTCTCACCGCTACTGGCATCTGATTTGAGCGACCTCCCA CCCACCACCATTGTGTACGGCGAATGCGACGTGTTAGCCCATGAAGTGCGAGCCTATGGACAAGCTCTACTAGAGGCTGG AAATTCCGTGACGATGACTGAATTCAAAGGACAGATCCACGCCTTTATTAACCTAGGGGGAATCAGTTCCGATGCGCGGG CTGCTCGACGACTCATCCGCGCCGAATTGGAAGCAGCACTTTGTTAA
Upstream 100 bases:
>100_bases GTACGAGTCTTAGACATCGAAGGCTCCTTTCTAACCTGCATCCAAGCCTAGGTGGAATTGAGATGACGCGTCGTAGAGAT CGAAAACTCAACCAAATTTC
Downstream 100 bases:
>100_bases AGGTTGAGATTTAACATTCGCCAGGTTCCGCTTCCCAAGAAATACGGATCATTTCCTCAAGCACCTCAAGATCAACATCC TCTGGTTTGTTGATATATAG
Product: esterase/lipase protein
Products: NA
Alternate protein names: Triacylglycerol lipase [H]
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MPKASRIVVMLLHPDAQFYIDTLPTLSAEEQVSFGKDAPVSEADATHVATDQDIAGVPVRVYTPLSGAGDLPCLVYFHGG GWSGGTLNMIDATVHSLVVGLPIIAISVDYRLAPAHPFPAAIDDAFAVVSAVLDGVSGLSIDTSRVAIGGDSAGGNIAAV TAQQLRERAVGSTPVLAHQVLIFPVTDVSTTSTPSYLTFGKDCYLTKDAMERYIEQYADGHDRTDPRLSPLLASDLSDLP PTTIVYGECDVLAHEVRAYGQALLEAGNSVTMTEFKGQIHAFINLGGISSDARAARRLIRAELEAALC
Sequences:
>Translated_308_residues MPKASRIVVMLLHPDAQFYIDTLPTLSAEEQVSFGKDAPVSEADATHVATDQDIAGVPVRVYTPLSGAGDLPCLVYFHGG GWSGGTLNMIDATVHSLVVGLPIIAISVDYRLAPAHPFPAAIDDAFAVVSAVLDGVSGLSIDTSRVAIGGDSAGGNIAAV TAQQLRERAVGSTPVLAHQVLIFPVTDVSTTSTPSYLTFGKDCYLTKDAMERYIEQYADGHDRTDPRLSPLLASDLSDLP PTTIVYGECDVLAHEVRAYGQALLEAGNSVTMTEFKGQIHAFINLGGISSDARAARRLIRAELEAALC >Mature_307_residues PKASRIVVMLLHPDAQFYIDTLPTLSAEEQVSFGKDAPVSEADATHVATDQDIAGVPVRVYTPLSGAGDLPCLVYFHGGG WSGGTLNMIDATVHSLVVGLPIIAISVDYRLAPAHPFPAAIDDAFAVVSAVLDGVSGLSIDTSRVAIGGDSAGGNIAAVT AQQLRERAVGSTPVLAHQVLIFPVTDVSTTSTPSYLTFGKDCYLTKDAMERYIEQYADGHDRTDPRLSPLLASDLSDLPP TTIVYGECDVLAHEVRAYGQALLEAGNSVTMTEFKGQIHAFINLGGISSDARAARRLIRAELEAALC
Specific function: Has An Esterase Activity. Triacetyl Glycerol (Triacetin) Is A Substrate Of The Enzyme. [C]
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Homo sapiens, GI157041239, Length=324, Percent_Identity=25.9259259259259, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI206597554, Length=323, Percent_Identity=26.9349845201238, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI68051721, Length=196, Percent_Identity=33.1632653061224, Blast_Score=90, Evalue=3e-18, Organism=Homo sapiens, GI68299767, Length=334, Percent_Identity=25.748502994012, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI226423947, Length=204, Percent_Identity=31.8627450980392, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI61966717, Length=179, Percent_Identity=27.3743016759777, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI1786682, Length=226, Percent_Identity=28.7610619469027, Blast_Score=79, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17567059, Length=269, Percent_Identity=31.5985130111524, Blast_Score=117, Evalue=5e-27, Organism=Caenorhabditis elegans, GI71996133, Length=146, Percent_Identity=38.3561643835616, Blast_Score=100, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17540028, Length=144, Percent_Identity=40.2777777777778, Blast_Score=98, Evalue=5e-21, Organism=Caenorhabditis elegans, GI72001146, Length=155, Percent_Identity=32.9032258064516, Blast_Score=87, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: =3.1.1.3 [H]
Molecular weight: Translated: 32492; Mature: 32361
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKASRIVVMLLHPDAQFYIDTLPTLSAEEQVSFGKDAPVSEADATHVATDQDIAGVPVR CCCCCEEEEEEECCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCEECCCCCCCCCCEE VYTPLSGAGDLPCLVYFHGGGWSGGTLNMIDATVHSLVVGLPIIAISVDYRLAPAHPFPA EEECCCCCCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHCEEEEEEECEEECCCCCCCH AIDDAFAVVSAVLDGVSGLSIDTSRVAIGGDSAGGNIAAVTAQQLRERAVGSTPVLAHQV HHHHHHHHHHHHHHCCCCCEECCCEEEECCCCCCCCEEEEEHHHHHHHHCCCCCHHEEEE LIFPVTDVSTTSTPSYLTFGKDCYLTKDAMERYIEQYADGHDRTDPRLSPLLASDLSDLP EEEEECCCCCCCCCCEEEECCCEEECHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC PTTIVYGECDVLAHEVRAYGQALLEAGNSVTMTEFKGQIHAFINLGGISSDARAARRLIR CCEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCHHHHHHHHHHH AELEAALC HHHHHHCC >Mature Secondary Structure PKASRIVVMLLHPDAQFYIDTLPTLSAEEQVSFGKDAPVSEADATHVATDQDIAGVPVR CCCCEEEEEEECCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCEECCCCCCCCCCEE VYTPLSGAGDLPCLVYFHGGGWSGGTLNMIDATVHSLVVGLPIIAISVDYRLAPAHPFPA EEECCCCCCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHCEEEEEEECEEECCCCCCCH AIDDAFAVVSAVLDGVSGLSIDTSRVAIGGDSAGGNIAAVTAQQLRERAVGSTPVLAHQV HHHHHHHHHHHHHHCCCCCEECCCEEEECCCCCCCCEEEEEHHHHHHHHCCCCCHHEEEE LIFPVTDVSTTSTPSYLTFGKDCYLTKDAMERYIEQYADGHDRTDPRLSPLLASDLSDLP EEEEECCCCCCCCCCEEEECCCEEECHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC PTTIVYGECDVLAHEVRAYGQALLEAGNSVTMTEFKGQIHAFINLGGISSDARAARRLIR CCEEEECCHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCHHHHHHHHHHH AELEAALC HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1907455 [H]