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The map label for this gene is yegQ [C]

Identifier: 59712597

GI number: 59712597

Start: 2223925

End: 2225313

Strand: Direct

Name: yegQ [C]

Synonym: VF_1990

Alternate gene names: 59712597

Gene position: 2223925-2225313 (Clockwise)

Preceding gene: 59712596

Following gene: 59712598

Centisome position: 76.75

GC content: 42.48

Gene sequence:

>1389_bases
ATGTTTAAACCAGAACTACTTTCGCCTGCGGGCAGCCTTAAAAATATGCGTTACGCGTTTGCCTACGGTGCAGATGCAGT
ATATGCAGGCCAACCACGTTACAGCCTTCGTGTTCGTAACAACGAATTCAACCATGAAAATCTGCAAATCGGTATTAACG
AAGCACACGCGCAAGGTAAGAAACTGTATGTGGTATGTAATATCCAACCACATAACTCAAAGTTAAAAACCTTCATTCGT
GACTTAAAACCAATCGTAGATATGGGTCCTGATGCCCTAATCATGTCAGATCCTGGTTTAATCATGATGGTTCGTGAAGC
TTTCCCTGATGTAGTTATCCACTTATCAGTTCAAGCTAACGCTGTAAACTGGGCTACGGTTAAGTTCTGGGCTAGCCAAG
GTGTTGAGCGTGTGATCTTATCTCGTGAATTATCACTAGAAGAAATTGAAGAGATCCGTGAACACTGCCCTGATACTGAA
TTAGAAATTTTCGTACACGGTGCATTATGCATGGCGTACTCAGGTCGTTGTCTGCTATCTGGTTACATGAACAAGCGTGA
CCCTAACCAAGGTACATGTACTAATGCATGTCGCTGGGAATACAAAACAGAAGCAGCAAAAGAAGACGAAAATGGTCAAA
TCGTTGAAGCTAATCCAACAGGTGTTGAGATCCAAGACGTTGAAGTTCAAAACGAACGTCCAGACAACACTCTAGGCTTA
GGTAAACCAACAGACGAAGTAGTTCTTCTTTCTGAATCTCACCGTCCTGAAGAGAAAATGGCTGCATTTGAAGATGAGCA
TGGTACTTACATCATGAACTCTAAAGATCTTCGTGCAATCCAACACGTTGAGCGTCTAACTAAAATGGGTGTTCACTCTC
TTAAAATTGAAGGTCGTACTAAGTCTTTCTACTACTGTGCTCGTACTGCTCAAGTTTACCGTAAAGCGATTGATGATGCC
GTTGCAGGTAAACCATTTGATGAAAGCCTAATGGGTACGCTAGAAAGCCTAGCTCACCGTGGCTACACAGAAGGTTTCCT
ACGTCGTCACACACACGATGCATACCAAAACTACGATTACGGTTACTCTATCTCTGACTCTCAACAATTCGTCGGTGAAT
TCACAGGTAAACGTCGTGGTGATTTAGCTGAAGTTGATGTTAAGAATAAATTCCTATTAGGTGACTCTGTTGAGATCATG
ACACCACAAGGTAACCTAACACTGACTCTAGATGTAATGGAAAACCGTAAGAGTGAAGCGGTTGAAGAAGCAAAAGGCAA
TGGCCACTTTGTTTTAATTCCAGTACCTGCAAATGTGGATCTAGAATACGGTCTTCTAATGCGTAACTTACACACGGGTG
AAGATACTCGTAATCCACACGGCAAGTAA

Upstream 100 bases:

>100_bases
CCTAGCACTTCCCTCACTTTCCATGTAAAATCCGGCCTCCTTCATATCTTCAGTGATATGAACTGACTTGAGATCAGAAT
ACTAAAATTGGGAAGCAATC

Downstream 100 bases:

>100_bases
GTAATGGCGTTATTGATCAATAAAAAATGCATTAACTGCGATATGTGTGAACCTGAGTGTCCAAATGAGGCAATCAGTAT
GGGTGATGAGATTTACGAAA

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 462; Mature: 462

Protein sequence:

>462_residues
MFKPELLSPAGSLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLQIGINEAHAQGKKLYVVCNIQPHNSKLKTFIR
DLKPIVDMGPDALIMSDPGLIMMVREAFPDVVIHLSVQANAVNWATVKFWASQGVERVILSRELSLEEIEEIREHCPDTE
LEIFVHGALCMAYSGRCLLSGYMNKRDPNQGTCTNACRWEYKTEAAKEDENGQIVEANPTGVEIQDVEVQNERPDNTLGL
GKPTDEVVLLSESHRPEEKMAAFEDEHGTYIMNSKDLRAIQHVERLTKMGVHSLKIEGRTKSFYYCARTAQVYRKAIDDA
VAGKPFDESLMGTLESLAHRGYTEGFLRRHTHDAYQNYDYGYSISDSQQFVGEFTGKRRGDLAEVDVKNKFLLGDSVEIM
TPQGNLTLTLDVMENRKSEAVEEAKGNGHFVLIPVPANVDLEYGLLMRNLHTGEDTRNPHGK

Sequences:

>Translated_462_residues
MFKPELLSPAGSLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLQIGINEAHAQGKKLYVVCNIQPHNSKLKTFIR
DLKPIVDMGPDALIMSDPGLIMMVREAFPDVVIHLSVQANAVNWATVKFWASQGVERVILSRELSLEEIEEIREHCPDTE
LEIFVHGALCMAYSGRCLLSGYMNKRDPNQGTCTNACRWEYKTEAAKEDENGQIVEANPTGVEIQDVEVQNERPDNTLGL
GKPTDEVVLLSESHRPEEKMAAFEDEHGTYIMNSKDLRAIQHVERLTKMGVHSLKIEGRTKSFYYCARTAQVYRKAIDDA
VAGKPFDESLMGTLESLAHRGYTEGFLRRHTHDAYQNYDYGYSISDSQQFVGEFTGKRRGDLAEVDVKNKFLLGDSVEIM
TPQGNLTLTLDVMENRKSEAVEEAKGNGHFVLIPVPANVDLEYGLLMRNLHTGEDTRNPHGK
>Mature_462_residues
MFKPELLSPAGSLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLQIGINEAHAQGKKLYVVCNIQPHNSKLKTFIR
DLKPIVDMGPDALIMSDPGLIMMVREAFPDVVIHLSVQANAVNWATVKFWASQGVERVILSRELSLEEIEEIREHCPDTE
LEIFVHGALCMAYSGRCLLSGYMNKRDPNQGTCTNACRWEYKTEAAKEDENGQIVEANPTGVEIQDVEVQNERPDNTLGL
GKPTDEVVLLSESHRPEEKMAAFEDEHGTYIMNSKDLRAIQHVERLTKMGVHSLKIEGRTKSFYYCARTAQVYRKAIDDA
VAGKPFDESLMGTLESLAHRGYTEGFLRRHTHDAYQNYDYGYSISDSQQFVGEFTGKRRGDLAEVDVKNKFLLGDSVEIM
TPQGNLTLTLDVMENRKSEAVEEAKGNGHFVLIPVPANVDLEYGLLMRNLHTGEDTRNPHGK

Specific function: Unknown

COG id: COG0826

COG function: function code O; Collagenase and related proteases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U32 family [H]

Homologues:

Organism=Escherichia coli, GI1788397, Length=462, Percent_Identity=77.0562770562771, Blast_Score=724, Evalue=0.0,
Organism=Escherichia coli, GI87081910, Length=409, Percent_Identity=27.3838630806846, Blast_Score=133, Evalue=3e-32,
Organism=Escherichia coli, GI1789548, Length=326, Percent_Identity=30.0613496932515, Blast_Score=127, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001539 [H]

Pfam domain/function: PF01136 Peptidase_U32 [H]

EC number: 3.4.-.- [C]

Molecular weight: Translated: 52062; Mature: 52062

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: PS01276 PEPTIDASE_U32

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKPELLSPAGSLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLQIGINEAHAQGK
CCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCEEEEEECCCCCCCEEEEEEEHHCCCCC
KLYVVCNIQPHNSKLKTFIRDLKPIVDMGPDALIMSDPGLIMMVREAFPDVVIHLSVQAN
EEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEHHCCCCEEEEEEEECC
AVNWATVKFWASQGVERVILSRELSLEEIEEIREHCPDTELEIFVHGALCMAYSGRCLLS
CEEEEEEEEHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEEEEEEHCCCCEEEE
GYMNKRDPNQGTCTNACRWEYKTEAAKEDENGQIVEANPTGVEIQDVEVQNERPDNTLGL
CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCC
GKPTDEVVLLSESHRPEEKMAAFEDEHGTYIMNSKDLRAIQHVERLTKMGVHSLKIEGRT
CCCCCCEEEEECCCCCHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCCEEEEEECCC
KSFYYCARTAQVYRKAIDDAVAGKPFDESLMGTLESLAHRGYTEGFLRRHTHDAYQNYDY
CEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
GYSISDSQQFVGEFTGKRRGDLAEVDVKNKFLLGDSVEIMTPQGNLTLTLDVMENRKSEA
CEECCCHHHHHHHHCCCCCCCEEEEECCCEEEECCCEEEEECCCCEEEEEEECCCCHHHH
VEEAKGNGHFVLIPVPANVDLEYGLLMRNLHTGEDTRNPHGK
HHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MFKPELLSPAGSLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLQIGINEAHAQGK
CCCCCCCCCCCCCCCCEEEEEECCCEEEECCCCEEEEEECCCCCCCEEEEEEEHHCCCCC
KLYVVCNIQPHNSKLKTFIRDLKPIVDMGPDALIMSDPGLIMMVREAFPDVVIHLSVQAN
EEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEHHCCCCEEEEEEEECC
AVNWATVKFWASQGVERVILSRELSLEEIEEIREHCPDTELEIFVHGALCMAYSGRCLLS
CEEEEEEEEHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCEEEEEEEEEEEHCCCCEEEE
GYMNKRDPNQGTCTNACRWEYKTEAAKEDENGQIVEANPTGVEIQDVEVQNERPDNTLGL
CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCC
GKPTDEVVLLSESHRPEEKMAAFEDEHGTYIMNSKDLRAIQHVERLTKMGVHSLKIEGRT
CCCCCCEEEEECCCCCHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHHCCCEEEEEECCC
KSFYYCARTAQVYRKAIDDAVAGKPFDESLMGTLESLAHRGYTEGFLRRHTHDAYQNYDY
CEEEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
GYSISDSQQFVGEFTGKRRGDLAEVDVKNKFLLGDSVEIMTPQGNLTLTLDVMENRKSEA
CEECCCHHHHHHHHCCCCCCCEEEEECCCEEEECCCEEEEECCCCEEEEEEECCCCHHHH
VEEAKGNGHFVLIPVPANVDLEYGLLMRNLHTGEDTRNPHGK
HHHHCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]