Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
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Accession | NC_006840 |
Length | 2,897,536 |
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The map label for this gene is 59712587
Identifier: 59712587
GI number: 59712587
Start: 2212697
End: 2213206
Strand: Direct
Name: 59712587
Synonym: VF_1980
Alternate gene names: NA
Gene position: 2212697-2213206 (Clockwise)
Preceding gene: 59712586
Following gene: 59712596
Centisome position: 76.36
GC content: 37.25
Gene sequence:
>510_bases ATGAGAGTATCCAAAATGAAAAAATTACATCTAGTTCTTGCTATTGCAACCCTGTTTAGTGCCAACACTTTTGCTAACAA TATCCACCTATCACCTGAAGTTAAAATCGGCCCTTATGGCGGCTTTGGTATTCAAGCTGGTGTTACTGATGCTTTAGGTT TTGATGCGGCCTATCTTAGTTACGGTCGTACCGTTTACAGCAGTTCAACTTATGATGAAACAATCGATTCATACCGTTTT GGTGTTCAACATATGTTTGGAGCATCTCAAATTCACGGTTTACAACTTGAAGTTGGTTTTGCTGATTACGATGGCAAAAA AACGAGTAAAAGCGAAACAACAAAAGAAAGAGCGTTAGGTTCAAGTATTGGGGCATCTTATGTATTTCAAGCTACTGACC AATTAGGATTAAGAGCTGGAGTAGATCTTAACTACTTCCCAATGAGTGATACGTATATTCCTTATGACTTAGCAACTAAC TTTAATCTTGGTATGACATTCACTTTTTAA
Upstream 100 bases:
>100_bases ATAACGACATGTAATTAGTCTCAAATGAACAATTTTCTTACTATACCCCCATCAAAATGCATTACATAAACAAAGCACGG ATGCTTTTTTTAAAACAATT
Downstream 100 bases:
>100_bases TGAATACCACCGTGATTAGTTATACCAATCGTAGTAAATAACTGATCGCTCTAACTTGTTAAAATGCTCGATAACTACGT TAGAATTTTTGATTGTAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MRVSKMKKLHLVLAIATLFSANTFANNIHLSPEVKIGPYGGFGIQAGVTDALGFDAAYLSYGRTVYSSSTYDETIDSYRF GVQHMFGASQIHGLQLEVGFADYDGKKTSKSETTKERALGSSIGASYVFQATDQLGLRAGVDLNYFPMSDTYIPYDLATN FNLGMTFTF
Sequences:
>Translated_169_residues MRVSKMKKLHLVLAIATLFSANTFANNIHLSPEVKIGPYGGFGIQAGVTDALGFDAAYLSYGRTVYSSSTYDETIDSYRF GVQHMFGASQIHGLQLEVGFADYDGKKTSKSETTKERALGSSIGASYVFQATDQLGLRAGVDLNYFPMSDTYIPYDLATN FNLGMTFTF >Mature_169_residues MRVSKMKKLHLVLAIATLFSANTFANNIHLSPEVKIGPYGGFGIQAGVTDALGFDAAYLSYGRTVYSSSTYDETIDSYRF GVQHMFGASQIHGLQLEVGFADYDGKKTSKSETTKERALGSSIGASYVFQATDQLGLRAGVDLNYFPMSDTYIPYDLATN FNLGMTFTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18481; Mature: 18481
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVSKMKKLHLVLAIATLFSANTFANNIHLSPEVKIGPYGGFGIQAGVTDALGFDAAYLS CCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEECCCCCCCCCCCCCHHHCCCHHHHH YGRTVYSSSTYDETIDSYRFGVQHMFGASQIHGLQLEVGFADYDGKKTSKSETTKERALG HCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHC SSIGASYVFQATDQLGLRAGVDLNYFPMSDTYIPYDLATNFNLGMTFTF CCCCCCEEEECCHHCCCCCCCCCEEECCCCCCCCEEECCCCCCEEEEEC >Mature Secondary Structure MRVSKMKKLHLVLAIATLFSANTFANNIHLSPEVKIGPYGGFGIQAGVTDALGFDAAYLS CCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEECCCCCCCCCCCCCHHHCCCHHHHH YGRTVYSSSTYDETIDSYRFGVQHMFGASQIHGLQLEVGFADYDGKKTSKSETTKERALG HCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHC SSIGASYVFQATDQLGLRAGVDLNYFPMSDTYIPYDLATNFNLGMTFTF CCCCCCEEEECCHHCCCCCCCCCEEECCCCCCCCEEECCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA