Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
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Accession | NC_006840 |
Length | 2,897,536 |
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The map label for this gene is cutC [H]
Identifier: 59712583
GI number: 59712583
Start: 2209087
End: 2209830
Strand: Direct
Name: cutC [H]
Synonym: VF_1976
Alternate gene names: 59712583
Gene position: 2209087-2209830 (Clockwise)
Preceding gene: 59712582
Following gene: 59712586
Centisome position: 76.24
GC content: 39.78
Gene sequence:
>744_bases ATGTCTATTCAAATTGAAGTCTGTATCGACAACCTAGAATCTCTACATAACGCAATAGCAGGTGGAGCAGATCGCATTGA ACTTTGCTCTTCTTTAGCTCTTGGTGGCTTAACTCCAAGCTTTGGCTTTATGAAAAAAGCCGCTGAAATCTCCCCTATTC CTGTCTATGCAATGATAAGACCTCGCCAAGGTGATTTCTTATATGATAACGATGATATATCAGCCATGATTTCTGATATC CAAGCGGCTAAATTAGCAGGCTTACAGGGCGTTGTATTTGGCGTATTAAAAGCCAATGGCGACATTGACATGCCACTTTC AGCTCGTTTAATGAAAATAGCTAACGATAATGATTTAGGCGTGACTTTTCATCGTGCTATAGACCAATGTTCTAACTATA AAAAAGCGATTGAGAATATTGCAGAACTTGGCTGTGAACGCATTCTAACCTCAGGGTTAGCAGCGAATGCCTATGATGGG ATAAATGTACTAGCAGATATGGTTAAACTCGCCAATGGACGTTTTGATATATTAGCTGGTGCAGGTGTCACCGCAGAAAA TGCAAAAGAAATAATAGAGAAAACAGGTGTGAAAGAGATTCACTTATCAGGTAAGTCCACACGACCAAGTAAAATGAAAC TGGTTTTAGATGGAGTGAAAATGGGTGCCGGTGATTTGGATGATTTTATTGTCCCAGTGACGGACTCTAAAAAAATTGAT GCCGTTAAGCAGCGCATAAAATAA
Upstream 100 bases:
>100_bases CTTATTAACTCTAATATAGATTCAATTCTGACGCCCTCTTCACACTACTTTCTTGGTTTATCCCTTACACTACAAGTATC TTTTTTTATATTTTTATATC
Downstream 100 bases:
>100_bases AAATAAAAAAGCCAGAGTACAAAAACTCTGGCTTTTATAAGTAAAATAACGAGTAATTATTTAGCTAATTGAACTGTATT TACGTCAATTGTTGTCTCAG
Product: copper homeostasis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MSIQIEVCIDNLESLHNAIAGGADRIELCSSLALGGLTPSFGFMKKAAEISPIPVYAMIRPRQGDFLYDNDDISAMISDI QAAKLAGLQGVVFGVLKANGDIDMPLSARLMKIANDNDLGVTFHRAIDQCSNYKKAIENIAELGCERILTSGLAANAYDG INVLADMVKLANGRFDILAGAGVTAENAKEIIEKTGVKEIHLSGKSTRPSKMKLVLDGVKMGAGDLDDFIVPVTDSKKID AVKQRIK
Sequences:
>Translated_247_residues MSIQIEVCIDNLESLHNAIAGGADRIELCSSLALGGLTPSFGFMKKAAEISPIPVYAMIRPRQGDFLYDNDDISAMISDI QAAKLAGLQGVVFGVLKANGDIDMPLSARLMKIANDNDLGVTFHRAIDQCSNYKKAIENIAELGCERILTSGLAANAYDG INVLADMVKLANGRFDILAGAGVTAENAKEIIEKTGVKEIHLSGKSTRPSKMKLVLDGVKMGAGDLDDFIVPVTDSKKID AVKQRIK >Mature_246_residues SIQIEVCIDNLESLHNAIAGGADRIELCSSLALGGLTPSFGFMKKAAEISPIPVYAMIRPRQGDFLYDNDDISAMISDIQ AAKLAGLQGVVFGVLKANGDIDMPLSARLMKIANDNDLGVTFHRAIDQCSNYKKAIENIAELGCERILTSGLAANAYDGI NVLADMVKLANGRFDILAGAGVTAENAKEIIEKTGVKEIHLSGKSTRPSKMKLVLDGVKMGAGDLDDFIVPVTDSKKIDA VKQRIK
Specific function: Involved in copper homeostasis [H]
COG id: COG3142
COG function: function code P; Uncharacterized protein involved in copper resistance
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CutC family [H]
Homologues:
Organism=Homo sapiens, GI148596990, Length=236, Percent_Identity=44.4915254237288, Blast_Score=196, Evalue=1e-50, Organism=Escherichia coli, GI87081995, Length=240, Percent_Identity=36.25, Blast_Score=160, Evalue=6e-41, Organism=Caenorhabditis elegans, GI17556905, Length=224, Percent_Identity=41.9642857142857, Blast_Score=182, Evalue=2e-46, Organism=Drosophila melanogaster, GI21355415, Length=237, Percent_Identity=37.1308016877637, Blast_Score=146, Evalue=1e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005627 [H]
Pfam domain/function: PF03932 CutC [H]
EC number: NA
Molecular weight: Translated: 26380; Mature: 26249
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIQIEVCIDNLESLHNAIAGGADRIELCSSLALGGLTPSFGFMKKAAEISPIPVYAMIR CCEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEEE PRQGDFLYDNDDISAMISDIQAAKLAGLQGVVFGVLKANGDIDMPLSARLMKIANDNDLG CCCCCEEECCCHHHHHHHHHHHHHHHCHHHHHHEEEECCCCCCCCHHHHHHHHCCCCCCC VTFHRAIDQCSNYKKAIENIAELGCERILTSGLAANAYDGINVLADMVKLANGRFDILAG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEC AGVTAENAKEIIEKTGVKEIHLSGKSTRPSKMKLVLDGVKMGAGDLDDFIVPVTDSKKID CCCCHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCHHHH AVKQRIK HHHHHCC >Mature Secondary Structure SIQIEVCIDNLESLHNAIAGGADRIELCSSLALGGLTPSFGFMKKAAEISPIPVYAMIR CEEEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEEEEE PRQGDFLYDNDDISAMISDIQAAKLAGLQGVVFGVLKANGDIDMPLSARLMKIANDNDLG CCCCCEEECCCHHHHHHHHHHHHHHHCHHHHHHEEEECCCCCCCCHHHHHHHHCCCCCCC VTFHRAIDQCSNYKKAIENIAELGCERILTSGLAANAYDGINVLADMVKLANGRFDILAG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEC AGVTAENAKEIIEKTGVKEIHLSGKSTRPSKMKLVLDGVKMGAGDLDDFIVPVTDSKKID CCCCHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCCEEEECCCCHHHH AVKQRIK HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA