Click here to switch to the map view.

The map label for this gene is rnfG

Identifier: 59711538

GI number: 59711538

Start: 1025013

End: 1025645

Strand: Reverse

Name: rnfG

Synonym: VF_0931

Alternate gene names: 59711538

Gene position: 1025645-1025013 (Counterclockwise)

Preceding gene: 59711539

Following gene: 59711537

Centisome position: 35.4

GC content: 39.02

Gene sequence:

>633_bases
ATGCTAACCACAATGAAAAAAAGTAGCCTTGTTTTGGCTCTGTTTGCAATAGCAGCAACCGCACTAGTTACCATTACTTA
TGCATTAACTAAAGATCAAATTGCGTATCAACAACAACAACAGTTATTGTCAGTTCTCAATCAGGTTGTTCCTAAAGAGC
AGCATGATAATGAACTATATAAAGCTTGTGTTCTTGTAAAAAATAAAGATGCTTTGGGCTCAAAACAGGCGATGCCAATT
TATCTTGCCTCATTAAATGGTCAACATTCTGGAGCAGCTATTGAAGCAATAGCGCCAGATGGATACAGTGGCAACATTAA
AATCATCGTTGGAGTTGATTCCGATGCAATGGTCACTGGTGTTCGTGTTCTTTCACACCAAGAAACGCCAGGGCTAGGTG
ATAAAATTGATATTCGAATAACTCGCTGGGTCGACGGATTTTTAGGAAAAACGGTTGAAAACGCAGAAGATAAAAATTGG
GCTGTACAAAAAGATGGCGGCCAATTTGATCAATTTACTGGCGCAACAATCACACCAAGAGCGGTAGTTAAAGCCGTAAA
AAGAGCGGTTTGGTTCTATAAGACACATCAAGAAGAGCTGCAAACTCTTCCATTAAATTGTGAGACAAAATAA

Upstream 100 bases:

>100_bases
GATGGTGTCGCTTTTGCTGTTTTATTAGCAAATATGTGCGTTCCATTAATTGATTACTACACAAAACCAAGAACTTACGG
CCATACTAAAGGATAAAACA

Downstream 100 bases:

>100_bases
TGGCAAGTCATAAAGAATTAGTTAAAAACGGTTTATGGGATAACAACCCTGCCCTAGTTCAACTATTAGGTCTTTGTCCC
TTACTTGCTGTTTCTGCCAC

Product: electron transport complex protein RnfG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MLTTMKKSSLVLALFAIAATALVTITYALTKDQIAYQQQQQLLSVLNQVVPKEQHDNELYKACVLVKNKDALGSKQAMPI
YLASLNGQHSGAAIEAIAPDGYSGNIKIIVGVDSDAMVTGVRVLSHQETPGLGDKIDIRITRWVDGFLGKTVENAEDKNW
AVQKDGGQFDQFTGATITPRAVVKAVKRAVWFYKTHQEELQTLPLNCETK

Sequences:

>Translated_210_residues
MLTTMKKSSLVLALFAIAATALVTITYALTKDQIAYQQQQQLLSVLNQVVPKEQHDNELYKACVLVKNKDALGSKQAMPI
YLASLNGQHSGAAIEAIAPDGYSGNIKIIVGVDSDAMVTGVRVLSHQETPGLGDKIDIRITRWVDGFLGKTVENAEDKNW
AVQKDGGQFDQFTGATITPRAVVKAVKRAVWFYKTHQEELQTLPLNCETK
>Mature_210_residues
MLTTMKKSSLVLALFAIAATALVTITYALTKDQIAYQQQQQLLSVLNQVVPKEQHDNELYKACVLVKNKDALGSKQAMPI
YLASLNGQHSGAAIEAIAPDGYSGNIKIIVGVDSDAMVTGVRVLSHQETPGLGDKIDIRITRWVDGFLGKTVENAEDKNW
AVQKDGGQFDQFTGATITPRAVVKAVKRAVWFYKTHQEELQTLPLNCETK

Specific function: May be part of a membrane complex involved in electron transport

COG id: COG4659

COG function: function code C; Predicted NADH:ubiquinone oxidoreductase, subunit RnfG

Gene ontology:

Cell location: Cell inner membrane (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rnfG family

Homologues:

Organism=Escherichia coli, GI1787918, Length=208, Percent_Identity=47.1153846153846, Blast_Score=189, Evalue=8e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNFG_VIBF1 (Q5E6C0)

Other databases:

- EMBL:   CP000020
- RefSeq:   YP_204314.1
- STRING:   Q5E6C0
- GeneID:   3278153
- GenomeReviews:   CP000020_GR
- KEGG:   vfi:VF_0931
- NMPDR:   fig|312309.3.peg.780
- eggNOG:   COG4659
- HOGENOM:   HBG454413
- OMA:   GMFDQFT
- PhylomeDB:   Q5E6C0
- ProtClustDB:   PRK01908
- BioCyc:   VFIS312309:VF0931-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_00479
- InterPro:   IPR022989
- InterPro:   IPR010209
- InterPro:   IPR007329
- SMART:   SM00900
- TIGRFAMs:   TIGR01947

Pfam domain/function: PF04205 FMN_bind

EC number: NA

Molecular weight: Translated: 23002; Mature: 23002

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xb704d64)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTTMKKSSLVLALFAIAATALVTITYALTKDQIAYQQQQQLLSVLNQVVPKEQHDNELY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
KACVLVKNKDALGSKQAMPIYLASLNGQHSGAAIEAIAPDGYSGNIKIIVGVDSDAMVTG
HHHEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCEEEEEECCCCHHHHH
VRVLSHQETPGLGDKIDIRITRWVDGFLGKTVENAEDKNWAVQKDGGQFDQFTGATITPR
HHHHHCCCCCCCCCEEEEEEEHHHHHHHCCHHCCCCCCCEEEECCCCCCCCCCCCEECHH
AVVKAVKRAVWFYKTHQEELQTLPLNCETK
HHHHHHHHHHHHHHCCHHHHHCCCCCCCCH
>Mature Secondary Structure
MLTTMKKSSLVLALFAIAATALVTITYALTKDQIAYQQQQQLLSVLNQVVPKEQHDNELY
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
KACVLVKNKDALGSKQAMPIYLASLNGQHSGAAIEAIAPDGYSGNIKIIVGVDSDAMVTG
HHHEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCEEEEEECCCCHHHHH
VRVLSHQETPGLGDKIDIRITRWVDGFLGKTVENAEDKNWAVQKDGGQFDQFTGATITPR
HHHHHCCCCCCCCCEEEEEEEHHHHHHHCCHHCCCCCCCEEEECCCCCCCCCCCCEECHH
AVVKAVKRAVWFYKTHQEELQTLPLNCETK
HHHHHHHHHHHHHHCCHHHHHCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA