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The map label for this gene is yejH [H]

Identifier: 59711471

GI number: 59711471

Start: 948644

End: 950368

Strand: Reverse

Name: yejH [H]

Synonym: VF_0864

Alternate gene names: 59711471

Gene position: 950368-948644 (Counterclockwise)

Preceding gene: 59711473

Following gene: 59711469

Centisome position: 32.8

GC content: 40.87

Gene sequence:

>1725_bases
ATGTATACGTTACGACCTTACCAACAAGATTCTGTTAAAGCGGTTATCCATTATTTCCGAAAACATACGACGCCTGCGGT
ACTTGTACTGCCTACAGGTGCAGGGAAAAGTTTGGTGATTGCAGAGCTAGCACGAATAGCGAAAGGTCGTGTATTGGTAC
TTGCTCACGTTAAAGAGCTTGTTGAACAAAACCATGCGAAATATGAAGGTTATGGTCTAGAGGGAGCGATTTTCTCAGCA
GGATTAGGTAGAAAAGAGACCGATAAACAGGTGGTATTTGCCTCTGTGCAATCTGTGGTTCGTAATCTTGATGAATTTAA
AGATCAATTTTCTCTGTTAGTTATTGATGAATGTCACCGTGTTCCAGATAACAAAGACACCAGCTATCGTAAAGTTATTG
AGCACTTACAGACCCAAAACTCTGGCATAAAAGTACTGGGGTTAACGGCGACGCCTTACCGTTTAGGAATTGGTTGGATT
TATCAGTATCACACTCGTGGACAGGTAAAAACCGATACGCCTCGCTTTTTCCGTGATTGTATTTTTGAACTCCCTATTCA
ATATCTATTAGATGAGGGATTTTTAACCCCTGCAAAACTCTTGGATGCACCAGTATTAAGTTATGACTTCTCACAGTTAA
AACCGGCTTCTACTGGTAAGTACAAAGAGTCAGAATTGGATTTAGTGATTGAAGAATCAAAACGTGCGACGCCACAAATC
GTTCAGCAAATTGTGGAATACGCGAAAGACAGAAAAGGTGTGATGATCTTTGCTGCTACCGTTCGCCATGCTCAAGAGAT
CCTTTCTTTATTGCCACCAACCGAGTCTGAACTGGTTATTGGTGATACTAAATTGGGTGATCGTGATGCCATCATTCAAC
GATTTAAAAATCAAGAAACGAAATTTTTAGTGAATGTGTCGGTATTAACCACGGGCTTTGATGCGCCTCATGTTGATTTA
ATTGCCATTTTACGCCCAACAGAATCGGTGAGTTTATATCAACAAATTGTTGGTCGTGGGCTTCGTCTTGCTGAAGGTAA
AACCGAGTGTACGGTCTTAGATTATGCAGGTAACTGTTATGATTTATATCAGCCAGAAGTTGGCGACCCGAAACCTGATA
GCAGTAGTGAAATCATTACTATCCCCTGCCCAGCTTGCGGCTTTAATAATAATTTCTGGGGCAAGTTAGACAGTAACGGT
TTTTTGCTTGAGCATTTTGGCCGTCGCTGCCAAGGTTATTTTGAAGATGACGAAGGCACACGTGAAGAGTGCGGTTATCG
TTTTAGAGCCAAATATTGTAATGAATGCGGCGCTGATAATGATATAGCAGCTCGTGTATGCCATGAATGCGATGCCATTT
TAGTTGATCCAGATAAGAAGCTAAAAGAAGCCCTGAAACTAAAAGATGCACGGATCTTAAATTGTATCGACCTGACATTA
ACCGCAGGAAAAAATCAATTTAATAAACCACAAATAAAAGTCACCTATTTTGGAGATGATGATTCTGAAATTCATGAAGT
GTGGCAATTGGCAACCAAAAAGCAGAAAGAGCTATTCTTAAAGAGTTTCGTTCGCCCGCATCTTGTTGATAGACATCGTC
CTTTTGAAGAAACGGCGGCAACAAAAATCGCGAATAACCAACACCGTTTTCGTCCACCTAGCTTTGTGATTGCTCGTAAG
CAAGGTAAGTTTTGGTCCATTCGCGACAAAATATTTGAAGAGTAA

Upstream 100 bases:

>100_bases
GCGATAGATAAGAACTGTTTTAATCTTAGCAAGAAAACAAAGAGTAATCTTATATATTCTGATATGATGCCTTTTTGCCT
TAACCACTGTTTATATATCC

Downstream 100 bases:

>100_bases
CGGTTGTTAAAACACGATTACCATAGAGAACGATAACTCATATGACATGAACGGCATTGAGAATAAGCACCACTGAGTGC
TTCTCTTGCTGCTTGTTCAT

Product: ATP-dependet helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 574; Mature: 574

Protein sequence:

>574_residues
MYTLRPYQQDSVKAVIHYFRKHTTPAVLVLPTGAGKSLVIAELARIAKGRVLVLAHVKELVEQNHAKYEGYGLEGAIFSA
GLGRKETDKQVVFASVQSVVRNLDEFKDQFSLLVIDECHRVPDNKDTSYRKVIEHLQTQNSGIKVLGLTATPYRLGIGWI
YQYHTRGQVKTDTPRFFRDCIFELPIQYLLDEGFLTPAKLLDAPVLSYDFSQLKPASTGKYKESELDLVIEESKRATPQI
VQQIVEYAKDRKGVMIFAATVRHAQEILSLLPPTESELVIGDTKLGDRDAIIQRFKNQETKFLVNVSVLTTGFDAPHVDL
IAILRPTESVSLYQQIVGRGLRLAEGKTECTVLDYAGNCYDLYQPEVGDPKPDSSSEIITIPCPACGFNNNFWGKLDSNG
FLLEHFGRRCQGYFEDDEGTREECGYRFRAKYCNECGADNDIAARVCHECDAILVDPDKKLKEALKLKDARILNCIDLTL
TAGKNQFNKPQIKVTYFGDDDSEIHEVWQLATKKQKELFLKSFVRPHLVDRHRPFEETAATKIANNQHRFRPPSFVIARK
QGKFWSIRDKIFEE

Sequences:

>Translated_574_residues
MYTLRPYQQDSVKAVIHYFRKHTTPAVLVLPTGAGKSLVIAELARIAKGRVLVLAHVKELVEQNHAKYEGYGLEGAIFSA
GLGRKETDKQVVFASVQSVVRNLDEFKDQFSLLVIDECHRVPDNKDTSYRKVIEHLQTQNSGIKVLGLTATPYRLGIGWI
YQYHTRGQVKTDTPRFFRDCIFELPIQYLLDEGFLTPAKLLDAPVLSYDFSQLKPASTGKYKESELDLVIEESKRATPQI
VQQIVEYAKDRKGVMIFAATVRHAQEILSLLPPTESELVIGDTKLGDRDAIIQRFKNQETKFLVNVSVLTTGFDAPHVDL
IAILRPTESVSLYQQIVGRGLRLAEGKTECTVLDYAGNCYDLYQPEVGDPKPDSSSEIITIPCPACGFNNNFWGKLDSNG
FLLEHFGRRCQGYFEDDEGTREECGYRFRAKYCNECGADNDIAARVCHECDAILVDPDKKLKEALKLKDARILNCIDLTL
TAGKNQFNKPQIKVTYFGDDDSEIHEVWQLATKKQKELFLKSFVRPHLVDRHRPFEETAATKIANNQHRFRPPSFVIARK
QGKFWSIRDKIFEE
>Mature_574_residues
MYTLRPYQQDSVKAVIHYFRKHTTPAVLVLPTGAGKSLVIAELARIAKGRVLVLAHVKELVEQNHAKYEGYGLEGAIFSA
GLGRKETDKQVVFASVQSVVRNLDEFKDQFSLLVIDECHRVPDNKDTSYRKVIEHLQTQNSGIKVLGLTATPYRLGIGWI
YQYHTRGQVKTDTPRFFRDCIFELPIQYLLDEGFLTPAKLLDAPVLSYDFSQLKPASTGKYKESELDLVIEESKRATPQI
VQQIVEYAKDRKGVMIFAATVRHAQEILSLLPPTESELVIGDTKLGDRDAIIQRFKNQETKFLVNVSVLTTGFDAPHVDL
IAILRPTESVSLYQQIVGRGLRLAEGKTECTVLDYAGNCYDLYQPEVGDPKPDSSSEIITIPCPACGFNNNFWGKLDSNG
FLLEHFGRRCQGYFEDDEGTREECGYRFRAKYCNECGADNDIAARVCHECDAILVDPDKKLKEALKLKDARILNCIDLTL
TAGKNQFNKPQIKVTYFGDDDSEIHEVWQLATKKQKELFLKSFVRPHLVDRHRPFEETAATKIANNQHRFRPPSFVIARK
QGKFWSIRDKIFEE

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1788511, Length=573, Percent_Identity=56.7190226876091, Blast_Score=703, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6320539, Length=380, Percent_Identity=29.7368421052632, Blast_Score=138, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR006935 [H]

Pfam domain/function: PF00271 Helicase_C; PF04851 ResIII [H]

EC number: NA

Molecular weight: Translated: 65162; Mature: 65162

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTLRPYQQDSVKAVIHYFRKHTTPAVLVLPTGAGKSLVIAELARIAKGRVLVLAHVKEL
CCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEHHHHHHH
VEQNHAKYEGYGLEGAIFSAGLGRKETDKQVVFASVQSVVRNLDEFKDQFSLLVIDECHR
HHHCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHC
VPDNKDTSYRKVIEHLQTQNSGIKVLGLTATPYRLGIGWIYQYHTRGQVKTDTPRFFRDC
CCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCEECEEEEEEEECCCCCCCCCHHHHHHH
IFELPIQYLLDEGFLTPAKLLDAPVLSYDFSQLKPASTGKYKESELDLVIEESKRATPQI
HHHCCHHHHHHCCCCCHHHHHCCCHHHCCHHHCCCCCCCCCCCCCCCEEEECCCCCCHHH
VQQIVEYAKDRKGVMIFAATVRHAQEILSLLPPTESELVIGDTKLGDRDAIIQRFKNQET
HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHCCCCC
KFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAEGKTECTVLDYAGNCY
EEEEEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHCCEEECCCCCEEEEEECCCCEE
DLYQPEVGDPKPDSSSEIITIPCPACGFNNNFWGKLDSNGFLLEHFGRRCQGYFEDDEGT
ECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCEEHHHHHHHHCCCCCCCCCC
REECGYRFRAKYCNECGADNDIAARVCHECDAILVDPDKKLKEALKLKDARILNCIDLTL
HHHCCCHHHHHHHHHCCCCCHHHHHHHHHCCEEEECCCHHHHHHHHHCCCCEEEEEEEEE
TAGKNQFNKPQIKVTYFGDDDSEIHEVWQLATKKQKELFLKSFVRPHLVDRHRPFEETAA
ECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
TKIANNQHRFRPPSFVIARKQGKFWSIRDKIFEE
HHHCCCCCCCCCCCEEEEECCCCEEEHHHHHCCC
>Mature Secondary Structure
MYTLRPYQQDSVKAVIHYFRKHTTPAVLVLPTGAGKSLVIAELARIAKGRVLVLAHVKEL
CCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEHHHHHHH
VEQNHAKYEGYGLEGAIFSAGLGRKETDKQVVFASVQSVVRNLDEFKDQFSLLVIDECHR
HHHCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHC
VPDNKDTSYRKVIEHLQTQNSGIKVLGLTATPYRLGIGWIYQYHTRGQVKTDTPRFFRDC
CCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCCEECEEEEEEEECCCCCCCCCHHHHHHH
IFELPIQYLLDEGFLTPAKLLDAPVLSYDFSQLKPASTGKYKESELDLVIEESKRATPQI
HHHCCHHHHHHCCCCCHHHHHCCCHHHCCHHHCCCCCCCCCCCCCCCEEEECCCCCCHHH
VQQIVEYAKDRKGVMIFAATVRHAQEILSLLPPTESELVIGDTKLGDRDAIIQRFKNQET
HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHCCCCC
KFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAEGKTECTVLDYAGNCY
EEEEEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHCCEEECCCCCEEEEEECCCCEE
DLYQPEVGDPKPDSSSEIITIPCPACGFNNNFWGKLDSNGFLLEHFGRRCQGYFEDDEGT
ECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCEEHHHHHHHHCCCCCCCCCC
REECGYRFRAKYCNECGADNDIAARVCHECDAILVDPDKKLKEALKLKDARILNCIDLTL
HHHCCCHHHHHHHHHCCCCCHHHHHHHHHCCEEEECCCHHHHHHHHHCCCCEEEEEEEEE
TAGKNQFNKPQIKVTYFGDDDSEIHEVWQLATKKQKELFLKSFVRPHLVDRHRPFEETAA
ECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
TKIANNQHRFRPPSFVIARKQGKFWSIRDKIFEE
HHHCCCCCCCCCCCEEEEECCCCEEEHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]