| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is hslJ [H]
Identifier: 59711468
GI number: 59711468
Start: 946966
End: 947409
Strand: Reverse
Name: hslJ [H]
Synonym: VF_0861
Alternate gene names: 59711468
Gene position: 947409-946966 (Counterclockwise)
Preceding gene: 59711469
Following gene: 59711450
Centisome position: 32.7
GC content: 41.22
Gene sequence:
>444_bases ATGAAAAAATTATTAGTTGCTGTATCTCTTCCTGTATTAATGGCTGCTTGTGCAAGCAATGGTGATAACAACACTGACGC ACAAATCTCTGCAGACATGCTTCAACACCACAACTGGCAGTTAACTCAAGTTGATGGTAAAGACATCGCTACTCCAGAAG AAATGGAAGCTCCACGTCTTGAAATCGGCGAAAAGATGACAGCAAATGGTAATGCAGGCTGTAACAACTTCTTTGGCCAA GCTGAGCTAAATGAAGAAGGTCAATTCCGCATTGAGAAAATGGGAATGACAATGAAAATGTGTATGGGTGATGTGATGAC AACAGAACAAGCTGTGTCTAGCACTCTATCTACTTGGAGTGACATTACACTAACTAAAGAAGGTCTTATCCTTAAAGGCC AAGAGCACGAGCTAACTTTCACACTACGTGACTGGGTAAACTAA
Upstream 100 bases:
>100_bases ACCGTTTTTTACGTACATTTGACATTAGGCATTTTTAAATTTTTATACTAAAATGAATTGAATATTAGGTAGTTCCTAAT AAATCTCTCTAGGAGTTAAA
Downstream 100 bases:
>100_bases TTTAGCTTTGCTTTTTAAAGACACAAAAAAACCGGTGAATTTCTTCACCGGTTTTTTATTATTTGTTATTTAGACAGCGC TACTCTTCAGTCCAGCGCTT
Product: heat shock protein HslJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MKKLLVAVSLPVLMAACASNGDNNTDAQISADMLQHHNWQLTQVDGKDIATPEEMEAPRLEIGEKMTANGNAGCNNFFGQ AELNEEGQFRIEKMGMTMKMCMGDVMTTEQAVSSTLSTWSDITLTKEGLILKGQEHELTFTLRDWVN
Sequences:
>Translated_147_residues MKKLLVAVSLPVLMAACASNGDNNTDAQISADMLQHHNWQLTQVDGKDIATPEEMEAPRLEIGEKMTANGNAGCNNFFGQ AELNEEGQFRIEKMGMTMKMCMGDVMTTEQAVSSTLSTWSDITLTKEGLILKGQEHELTFTLRDWVN >Mature_147_residues MKKLLVAVSLPVLMAACASNGDNNTDAQISADMLQHHNWQLTQVDGKDIATPEEMEAPRLEIGEKMTANGNAGCNNFFGQ AELNEEGQFRIEKMGMTMKMCMGDVMTTEQAVSSTLSTWSDITLTKEGLILKGQEHELTFTLRDWVN
Specific function: Unknown
COG id: COG3187
COG function: function code O; Heat shock protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787644, Length=148, Percent_Identity=31.0810810810811, Blast_Score=70, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005184 [H]
Pfam domain/function: PF03724 META [H]
EC number: NA
Molecular weight: Translated: 16242; Mature: 16242
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 7.5 %Met (Translated Protein) 9.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 7.5 %Met (Mature Protein) 9.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLVAVSLPVLMAACASNGDNNTDAQISADMLQHHNWQLTQVDGKDIATPEEMEAPRL CCCEEEEHHHHHHHHHHHCCCCCCCCHHEEHHHHHCCCCEEEEECCCCCCCCCCCCCCCH EIGEKMTANGNAGCNNFFGQAELNEEGQFRIEKMGMTMKMCMGDVMTTEQAVSSTLSTWS HCCCEECCCCCCCCCCCCCCCEECCCCCEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHCC DITLTKEGLILKGQEHELTFTLRDWVN CEEEECCCEEEECCCCEEEEEECCCCC >Mature Secondary Structure MKKLLVAVSLPVLMAACASNGDNNTDAQISADMLQHHNWQLTQVDGKDIATPEEMEAPRL CCCEEEEHHHHHHHHHHHCCCCCCCCHHEEHHHHHCCCCEEEEECCCCCCCCCCCCCCCH EIGEKMTANGNAGCNNFFGQAELNEEGQFRIEKMGMTMKMCMGDVMTTEQAVSSTLSTWS HCCCEECCCCCCCCCCCCCCCEECCCCCEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHCC DITLTKEGLILKGQEHELTFTLRDWVN CEEEECCCEEEECCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9025293; 9097039; 9278503; 8349564 [H]