| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is pta [H]
Identifier: 59711443
GI number: 59711443
Start: 921399
End: 923564
Strand: Reverse
Name: pta [H]
Synonym: VF_0836
Alternate gene names: 59711443
Gene position: 923564-921399 (Counterclockwise)
Preceding gene: 59711444
Following gene: 59711436
Centisome position: 31.87
GC content: 44.64
Gene sequence:
>2166_bases ATGTCTCGTACTATTATGCTTGTTCCAATCAGTGCTGGTGTTGGTCTAACTAGCGCAAGTTTGGGTGTATTACGTTCAAT GGAACGTAAAGGCGTAAGCGTTTCTTTTTACAAACCAATCTCTCAGCCTCGTCACGGTGGTGATCAACCTGATCTAACTA CTTCAATCGTGACTAGCAGCAGCGATATCAAAGCAGCAGAACCAACTACAATCTCTCGTGCAGAAGAACTGCTACGTAAC GAACAGTCTGACGTTCTTCTAGAAGAAATCGTTGCGCGTTACAAGTCAATCAGCCAAGGCACTGATGTGACACTTATCGA AGGTTTAGTTCCTACTCGTAAACACCCATTTGCTAACCAATTAAACGGTGAAATTGCAAAAACTCTGGGTGCTGAGATTG TGTTTGTAGCAACTCCTGGTACAGATAACCCTTCTCAACTTAAAGAGCGTATCGAAGTAGCATGTTCTAACTTTGGTGGC ACTAAGAACAAACAAATCGCTGGCGTTATCATTAACAAGCTAAATGCACCTGTTGATGAAGCTGGTCGTACTCGCCCTGA CCTATCTGAAATCTTTGATGATGCAGATGCAACGACTAAGACTAACCTTGAAGTAATGCAAATCTTCAACTCTAGTCCTA TTCGTGTTCTTGGTTGTGTGCCTTGGAAAGTAGACCTAATTGCTACTCGTGCTATCGACATGGCTAAGCACTTAAATGCT GAAATCATCAACGAAGGTGATATTGCTACTCGTCGTATTAAGAGCATCACTTTCTGTGCACGTTCTCTACCGCACATGAT TGAGCACTTCAAACCAGGTTCTCTACTAGTAACTTCTGCTGACCGTCCTGACGTTATCGTTGCTGCATGTCTTGCTGCAA TGAACGGCGTAGAAATCGGCGCAATCTTACTGACTGGCGGTTACGAAATCCCTCAATCAATTGCTGAACTTTGTAAGCCT GCTCTAGAGTCTGGTCTTCCAATCTTCACTGCACAAGGTAACACTTGGCAGACGTCTCTAAATCTACAAAGCTTCAGCCT TGAAGTTCCTGCAGATGATAAAGAGCGTATTGAGTTTGTTAACGAGCACGTTGCTAGCCACATTGATGGCCCTTGGATTG ACTCTCTATCTGAAGGTACTGAAGGTATCCGTCGTCTAAGCCCACCAGCATTCCGTTACCAGTTAACTGAATTTGCTCGT AAAGCGGCTAAACGTATCGTTCTTCCTGAAGGTGATGAGCCTCGTACAGTTAAAGCTGCGGCTATCTGTGCTGAGCGTGG TATCGCGACTTGTGTTCTTTTAGGTAACCCTGAAGAAATCCGTCGTGTTGCAGCGCAACAAGGTGTTGAACTTGGTGCTG GCGTTGAGATCATCGATTCTGATTCTGTACGTGAAAACTACGTTGCTCGTTTAGTTGAGCTACGTGGCGCGAAAGGCATG ACTGAAGTTGTGGCTCGTGAAAAACTACAAGATTCTGTATTCCTTGGTACTATGATGCTTGAAGCGGGTGAAGTTGACGG TCTTGTTTCTGGTGCGGTTCATACCACAGCAAACACTATCGTTCCTCCATTCCAAATCATCAAAACAGCTCCTGATGCTT CTATCGTATCTTCAATCTTCTTCATGCTTCTTCCTGATCAAGTTCTTGTATACGGTGACTGTGCGATCAACCCTGATCCA ACAGCTGAGCAACTTGCTGAAATCGCTATCCAATCTGCTGATTCTGCAATGGCGTTTGGTATCGACCCACGCGTTGCAAT GATCTCTTACTCTACTGGTGAATCTGGTAAGGGTGCAGACGTTGATAAAGTACGCGAAGCAACTAAGATCGCTCAAGAGA AACGTCCTGATCTAGTAATCGACGGTCCTCTACAGTACGATGCTGCAATCATGGAAAACGTAGCTGCTTCTAAAGCTCCT AACTCTCCTGTAGCTGGTAAAGCAACTGTATTTGTATTCCCAGACCTAAACACTGGTAACACAACGTACAAAGCAGTTCA ACGTTCTGCTGACCTAGTATCTATCGGTCCAATGCTTCAAGGCATGCGCAAGCCAGTAAATGACTTGTCTCGTGGTGCTC TAGTTGACGATATCGTATACACAGTAGCACTAACAGCTATCCAAGCGGATCAAGCTGCACAAGCTGAAGAGAAAGTAATT AACTAA
Upstream 100 bases:
>100_bases ATATCTCCTAAAAGGCTAGCCATTAGGTTAGCCTTTTTTCTTTCTATGGCTTTATTTTTTCAATAAGGTCTCTTGCCCCA ATAGTGTAGAGGAATTTTCC
Downstream 100 bases:
>100_bases TTTCATGCTCTAGAAATAGAGCGTAGTTAATGAAAATAAGAAGACACGCGATGAAAGTTGCGTGTCTTTTTTTGTGCTTA TAAAGTAGGGACTAGGGACG
Product: phosphate acetyltransferase
Products: NA
Alternate protein names: Phosphotransacetylase [H]
Number of amino acids: Translated: 721; Mature: 720
Protein sequence:
>721_residues MSRTIMLVPISAGVGLTSASLGVLRSMERKGVSVSFYKPISQPRHGGDQPDLTTSIVTSSSDIKAAEPTTISRAEELLRN EQSDVLLEEIVARYKSISQGTDVTLIEGLVPTRKHPFANQLNGEIAKTLGAEIVFVATPGTDNPSQLKERIEVACSNFGG TKNKQIAGVIINKLNAPVDEAGRTRPDLSEIFDDADATTKTNLEVMQIFNSSPIRVLGCVPWKVDLIATRAIDMAKHLNA EIINEGDIATRRIKSITFCARSLPHMIEHFKPGSLLVTSADRPDVIVAACLAAMNGVEIGAILLTGGYEIPQSIAELCKP ALESGLPIFTAQGNTWQTSLNLQSFSLEVPADDKERIEFVNEHVASHIDGPWIDSLSEGTEGIRRLSPPAFRYQLTEFAR KAAKRIVLPEGDEPRTVKAAAICAERGIATCVLLGNPEEIRRVAAQQGVELGAGVEIIDSDSVRENYVARLVELRGAKGM TEVVAREKLQDSVFLGTMMLEAGEVDGLVSGAVHTTANTIVPPFQIIKTAPDASIVSSIFFMLLPDQVLVYGDCAINPDP TAEQLAEIAIQSADSAMAFGIDPRVAMISYSTGESGKGADVDKVREATKIAQEKRPDLVIDGPLQYDAAIMENVAASKAP NSPVAGKATVFVFPDLNTGNTTYKAVQRSADLVSIGPMLQGMRKPVNDLSRGALVDDIVYTVALTAIQADQAAQAEEKVI N
Sequences:
>Translated_721_residues MSRTIMLVPISAGVGLTSASLGVLRSMERKGVSVSFYKPISQPRHGGDQPDLTTSIVTSSSDIKAAEPTTISRAEELLRN EQSDVLLEEIVARYKSISQGTDVTLIEGLVPTRKHPFANQLNGEIAKTLGAEIVFVATPGTDNPSQLKERIEVACSNFGG TKNKQIAGVIINKLNAPVDEAGRTRPDLSEIFDDADATTKTNLEVMQIFNSSPIRVLGCVPWKVDLIATRAIDMAKHLNA EIINEGDIATRRIKSITFCARSLPHMIEHFKPGSLLVTSADRPDVIVAACLAAMNGVEIGAILLTGGYEIPQSIAELCKP ALESGLPIFTAQGNTWQTSLNLQSFSLEVPADDKERIEFVNEHVASHIDGPWIDSLSEGTEGIRRLSPPAFRYQLTEFAR KAAKRIVLPEGDEPRTVKAAAICAERGIATCVLLGNPEEIRRVAAQQGVELGAGVEIIDSDSVRENYVARLVELRGAKGM TEVVAREKLQDSVFLGTMMLEAGEVDGLVSGAVHTTANTIVPPFQIIKTAPDASIVSSIFFMLLPDQVLVYGDCAINPDP TAEQLAEIAIQSADSAMAFGIDPRVAMISYSTGESGKGADVDKVREATKIAQEKRPDLVIDGPLQYDAAIMENVAASKAP NSPVAGKATVFVFPDLNTGNTTYKAVQRSADLVSIGPMLQGMRKPVNDLSRGALVDDIVYTVALTAIQADQAAQAEEKVI N >Mature_720_residues SRTIMLVPISAGVGLTSASLGVLRSMERKGVSVSFYKPISQPRHGGDQPDLTTSIVTSSSDIKAAEPTTISRAEELLRNE QSDVLLEEIVARYKSISQGTDVTLIEGLVPTRKHPFANQLNGEIAKTLGAEIVFVATPGTDNPSQLKERIEVACSNFGGT KNKQIAGVIINKLNAPVDEAGRTRPDLSEIFDDADATTKTNLEVMQIFNSSPIRVLGCVPWKVDLIATRAIDMAKHLNAE IINEGDIATRRIKSITFCARSLPHMIEHFKPGSLLVTSADRPDVIVAACLAAMNGVEIGAILLTGGYEIPQSIAELCKPA LESGLPIFTAQGNTWQTSLNLQSFSLEVPADDKERIEFVNEHVASHIDGPWIDSLSEGTEGIRRLSPPAFRYQLTEFARK AAKRIVLPEGDEPRTVKAAAICAERGIATCVLLGNPEEIRRVAAQQGVELGAGVEIIDSDSVRENYVARLVELRGAKGMT EVVAREKLQDSVFLGTMMLEAGEVDGLVSGAVHTTANTIVPPFQIIKTAPDASIVSSIFFMLLPDQVLVYGDCAINPDPT AEQLAEIAIQSADSAMAFGIDPRVAMISYSTGESGKGADVDKVREATKIAQEKRPDLVIDGPLQYDAAIMENVAASKAPN SPVAGKATVFVFPDLNTGNTTYKAVQRSADLVSIGPMLQGMRKPVNDLSRGALVDDIVYTVALTAIQADQAAQAEEKVIN
Specific function: Conversion of acetate to acetyl-CoA; second step. [C]
COG id: COG0857
COG function: function code R; BioD-like N-terminal domain of phosphotransacetylase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1788635, Length=712, Percent_Identity=74.1573033707865, Blast_Score=1093, Evalue=0.0, Organism=Escherichia coli, GI1788800, Length=317, Percent_Identity=40.0630914826498, Blast_Score=223, Evalue=3e-59, Organism=Escherichia coli, GI1788806, Length=344, Percent_Identity=31.1046511627907, Blast_Score=165, Evalue=8e-42,
Paralogues:
None
Copy number: 1420 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 1250 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010766 - InterPro: IPR016475 - InterPro: IPR004614 - InterPro: IPR002505 [H]
Pfam domain/function: PF07085 DRTGG; PF01515 PTA_PTB [H]
EC number: =2.3.1.8 [H]
Molecular weight: Translated: 77259; Mature: 77128
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRTIMLVPISAGVGLTSASLGVLRSMERKGVSVSFYKPISQPRHGGDQPDLTTSIVTSS CCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHEEECC SDIKAAEPTTISRAEELLRNEQSDVLLEEIVARYKSISQGTDVTLIEGLVPTRKHPFANQ CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHH LNGEIAKTLGAEIVFVATPGTDNPSQLKERIEVACSNFGGTKNKQIAGVIINKLNAPVDE HCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCHHH AGRTRPDLSEIFDDADATTKTNLEVMQIFNSSPIRVLGCVPWKVDLIATRAIDMAKHLNA CCCCCCCHHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEECCCEEHHHHHHHHHHHHHCCC EIINEGDIATRRIKSITFCARSLPHMIEHFKPGSLLVTSADRPDVIVAACLAAMNGVEIG CEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCEEE AILLTGGYEIPQSIAELCKPALESGLPIFTAQGNTWQTSLNLQSFSLEVPADDKERIEFV EEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECEEEEEEECCCCHHHHHHHH NEHVASHIDGPWIDSLSEGTEGIRRLSPPAFRYQLTEFARKAAKRIVLPEGDEPRTVKAA HHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHH AICAERGIATCVLLGNPEEIRRVAAQQGVELGAGVEIIDSDSVRENYVARLVELRGAKGM HHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCH TEVVAREKLQDSVFLGTMMLEAGEVDGLVSGAVHTTANTIVPPFQIIKTAPDASIVSSIF HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHCCCCCCCCHHHHHCCCCHHHHHHHH FMLLPDQVLVYGDCAINPDPTAEQLAEIAIQSADSAMAFGIDPRVAMISYSTGESGKGAD HHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCEEEEEECCCCCCCCCC VDKVREATKIAQEKRPDLVIDGPLQYDAAIMENVAASKAPNSPVAGKATVFVFPDLNTGN HHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCC TTYKAVQRSADLVSIGPMLQGMRKPVNDLSRGALVDDIVYTVALTAIQADQAAQAEEKVI HHHHHHHHCCCCEEHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC N C >Mature Secondary Structure SRTIMLVPISAGVGLTSASLGVLRSMERKGVSVSFYKPISQPRHGGDQPDLTTSIVTSS CCEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCHHEEECC SDIKAAEPTTISRAEELLRNEQSDVLLEEIVARYKSISQGTDVTLIEGLVPTRKHPFANQ CCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHH LNGEIAKTLGAEIVFVATPGTDNPSQLKERIEVACSNFGGTKNKQIAGVIINKLNAPVDE HCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHCCCHHH AGRTRPDLSEIFDDADATTKTNLEVMQIFNSSPIRVLGCVPWKVDLIATRAIDMAKHLNA CCCCCCCHHHHHCCCCCCCCCCHHHHHHHCCCCEEEEEECCCEEHHHHHHHHHHHHHCCC EIINEGDIATRRIKSITFCARSLPHMIEHFKPGSLLVTSADRPDVIVAACLAAMNGVEIG CEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCEEE AILLTGGYEIPQSIAELCKPALESGLPIFTAQGNTWQTSLNLQSFSLEVPADDKERIEFV EEEEECCCHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECEEEEEEECCCCHHHHHHHH NEHVASHIDGPWIDSLSEGTEGIRRLSPPAFRYQLTEFARKAAKRIVLPEGDEPRTVKAA HHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHH AICAERGIATCVLLGNPEEIRRVAAQQGVELGAGVEIIDSDSVRENYVARLVELRGAKGM HHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCCH TEVVAREKLQDSVFLGTMMLEAGEVDGLVSGAVHTTANTIVPPFQIIKTAPDASIVSSIF HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHCCCCCCCCHHHHHCCCCHHHHHHHH FMLLPDQVLVYGDCAINPDPTAEQLAEIAIQSADSAMAFGIDPRVAMISYSTGESGKGAD HHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCEEECCCCCEEEEEECCCCCCCCCC VDKVREATKIAQEKRPDLVIDGPLQYDAAIMENVAASKAPNSPVAGKATVFVFPDLNTGN HHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCC TTYKAVQRSADLVSIGPMLQGMRKPVNDLSRGALVDDIVYTVALTAIQADQAAQAEEKVI HHHHHHHHCCCCEEHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC N C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7883769; 7918659; 9205837; 9278503; 2536666 [H]