| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711301
Identifier: 59711301
GI number: 59711301
Start: 757760
End: 758368
Strand: Reverse
Name: 59711301
Synonym: VF_0694
Alternate gene names: NA
Gene position: 758368-757760 (Counterclockwise)
Preceding gene: 59711304
Following gene: 172087675
Centisome position: 26.17
GC content: 38.26
Gene sequence:
>609_bases GTGGAAAAAATAAAACATTCACATAAAGAAGATGTGATCGCTATTTTGACAGGCACTTTTTTAGTATCACAAGGGATTTT CTTTTTACAAGCCGCACACTTACTGACTGGCGGAACAACAGGACTAGCTTTATTAATTAGCCAAATGAGTGGCATCAGCT TTGGTATTCTTTATTTTCTATGTAACTTGCCTTTTTATGCACTGGCTTGGCAACGCTTTGGAAAACGTTTCGCATTAACC AGTTTAATTTCTGGGGCGCTTGTTTCTATCATGACAGATCATTTAAATATGATGATTTCAGTGGATCATATCAATGATAT TTACTGTGCCGTTGCTGGTGGGCTATTGATGGGGTTAGGTATGTTGATTCTATTTAGACACCGCTCAAGTCTAGGTGGCT TCAATGTGCTATGTCTGTTTATTCAAGAGAAATTCGGGATCTCTGTAGGTAAAGTTCAAATGGCCATTGACTGCTGTATT TTAACTGCTTCGTTTTTCTTTATCACTCCATGGTTACTCCTCGTTTCAGTATTAGGTGCCGTTGTTCTCAATATTGTATT GGCAATGAACCACAAGCCAACTCGTTATATTGTTACCTACGGCTCTTAA
Upstream 100 bases:
>100_bases CTACAAACCCTCTATTTATTTACGTCTAGCTAATTGCATAAATTCCGATTCACTCTATCCTAGCGACCATCATTATGTTC GTCGCAAGGTATTGCACACT
Downstream 100 bases:
>100_bases GCTAAATACAATAATGCCCATGCAAATGAATGTATGGGCATTTTTATCTAATCTATTTTCTACAAAATATCTGACTATTT ACTTAAATTAGTATTACTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 202
Protein sequence:
>202_residues MEKIKHSHKEDVIAILTGTFLVSQGIFFLQAAHLLTGGTTGLALLISQMSGISFGILYFLCNLPFYALAWQRFGKRFALT SLISGALVSIMTDHLNMMISVDHINDIYCAVAGGLLMGLGMLILFRHRSSLGGFNVLCLFIQEKFGISVGKVQMAIDCCI LTASFFFITPWLLLVSVLGAVVLNIVLAMNHKPTRYIVTYGS
Sequences:
>Translated_202_residues MEKIKHSHKEDVIAILTGTFLVSQGIFFLQAAHLLTGGTTGLALLISQMSGISFGILYFLCNLPFYALAWQRFGKRFALT SLISGALVSIMTDHLNMMISVDHINDIYCAVAGGLLMGLGMLILFRHRSSLGGFNVLCLFIQEKFGISVGKVQMAIDCCI LTASFFFITPWLLLVSVLGAVVLNIVLAMNHKPTRYIVTYGS >Mature_202_residues MEKIKHSHKEDVIAILTGTFLVSQGIFFLQAAHLLTGGTTGLALLISQMSGISFGILYFLCNLPFYALAWQRFGKRFALT SLISGALVSIMTDHLNMMISVDHINDIYCAVAGGLLMGLGMLILFRHRSSLGGFNVLCLFIQEKFGISVGKVQMAIDCCI LTASFFFITPWLLLVSVLGAVVLNIVLAMNHKPTRYIVTYGS
Specific function: Unknown
COG id: COG1284
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22113; Mature: 22113
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKIKHSHKEDVIAILTGTFLVSQGIFFLQAAHLLTGGTTGLALLISQMSGISFGILYFL CCCCCCCCHHCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH CNLPFYALAWQRFGKRFALTSLISGALVSIMTDHLNMMISVDHINDIYCAVAGGLLMGLG HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHH MLILFRHRSSLGGFNVLCLFIQEKFGISVGKVQMAIDCCILTASFFFITPWLLLVSVLGA HHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVLNIVLAMNHKPTRYIVTYGS HHHHHHHHCCCCCCEEEEEECC >Mature Secondary Structure MEKIKHSHKEDVIAILTGTFLVSQGIFFLQAAHLLTGGTTGLALLISQMSGISFGILYFL CCCCCCCCHHCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH CNLPFYALAWQRFGKRFALTSLISGALVSIMTDHLNMMISVDHINDIYCAVAGGLLMGLG HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHH MLILFRHRSSLGGFNVLCLFIQEKFGISVGKVQMAIDCCILTASFFFITPWLLLVSVLGA HHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVLNIVLAMNHKPTRYIVTYGS HHHHHHHHCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA