| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711218
Identifier: 59711218
GI number: 59711218
Start: 669895
End: 670932
Strand: Reverse
Name: 59711218
Synonym: VF_0611
Alternate gene names: NA
Gene position: 670932-669895 (Counterclockwise)
Preceding gene: 59711221
Following gene: 59711217
Centisome position: 23.16
GC content: 39.4
Gene sequence:
>1038_bases ATGGATCAGATTTATACGCTTACCCAACTGATACAGCAATCAGATTGTGAATACACGATTTATGACTTAGGTCGCCGTGT TCAACCTATCTCAAATAAACAATTTGAATCTATTGAAGCTGGACAGCAACCTTATCCTTACCCACTACAACGTCATGCTC ATTTAGCTATCGCTTATTGGAATGACACAAAACAACCTTGGATTTGGTTTTTAAAACTGCCTTTAGATGAACGAAGTCTA CTGCAACAAGCTGATATCGGTAATTTTATTAAGTACGTTATCGAAGCGATTGGAGTGTCATTAAGCGGCGATTTAAGCGA AGAGCAGCAACAAAAGTTGTCAAATAACCCTTATACCTTTAAGCCTAAAGATGACAAGATGGCAATGTTTCATAGTCTCT TGCGTGCGGAATTAGCACAGCCGATGAGTCAATATTATGAGCATGCTAAAACTTACCTTTCAGGTACAAACGGTTGGGAT AACTGGCAATTTGTGGGAATGCAAGGGTTAGCAGATGTATGTGCAAATCTAAATAAAGACAACAACAGTACAGCACTTCG CAAAGCGTTGTCTCATTTACCGACAACGGTTTTATACGCAACATTAGGTTGCTTAGAACACATCAACTTACCTGAAAAAT TAGCACAAAAGCAATTAGAAACAATCCAAGATCTATGCAACGACAAAGAATCTGATCTGTTTCTATTATCTGCACATATT CGTGCACTTTCTGGAGCAGATAAGAATACTTTAATTAAAGCACTGACTTTGATTTTAGCGAGTGAGCGCCTAAGCCACCC TGAAGTTCTTGTCGCTATTGCTGGTCGTTGTTGGAGTGGATTAGAGGAGCTGTCTGCTGCTAATCTTTTCCTATTACGAT TGGCTCAAACGGGTGATCAACAGCTATTTAATCAGTTGTTTGCTGATTTAGTAATGCAACCGAAACTTCGTATGTGCATG CTTCAGATCCTTCATGGAGAAGCGGATCCTAAACTGGCTAACGCTTTATTAAAATTGCAGCAAACCACCAAGAGCTAA
Upstream 100 bases:
>100_bases CCGATAAAACTCGCACTCTCTGATACTTTTGATAACAAAGGATACCATCTTATCAAGGCTTGGGTATAATCACGACATTA CCCATAAAATAAGACATATC
Downstream 100 bases:
>100_bases GATATGGATAATCTACTTGCGATATTAGCGCTAACCCTATTCTGCTTTCTTTTTTGGCAACAAAGAAGACAATCGGAATA TGCTCACCAAGCTATTCAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MDQIYTLTQLIQQSDCEYTIYDLGRRVQPISNKQFESIEAGQQPYPYPLQRHAHLAIAYWNDTKQPWIWFLKLPLDERSL LQQADIGNFIKYVIEAIGVSLSGDLSEEQQQKLSNNPYTFKPKDDKMAMFHSLLRAELAQPMSQYYEHAKTYLSGTNGWD NWQFVGMQGLADVCANLNKDNNSTALRKALSHLPTTVLYATLGCLEHINLPEKLAQKQLETIQDLCNDKESDLFLLSAHI RALSGADKNTLIKALTLILASERLSHPEVLVAIAGRCWSGLEELSAANLFLLRLAQTGDQQLFNQLFADLVMQPKLRMCM LQILHGEADPKLANALLKLQQTTKS
Sequences:
>Translated_345_residues MDQIYTLTQLIQQSDCEYTIYDLGRRVQPISNKQFESIEAGQQPYPYPLQRHAHLAIAYWNDTKQPWIWFLKLPLDERSL LQQADIGNFIKYVIEAIGVSLSGDLSEEQQQKLSNNPYTFKPKDDKMAMFHSLLRAELAQPMSQYYEHAKTYLSGTNGWD NWQFVGMQGLADVCANLNKDNNSTALRKALSHLPTTVLYATLGCLEHINLPEKLAQKQLETIQDLCNDKESDLFLLSAHI RALSGADKNTLIKALTLILASERLSHPEVLVAIAGRCWSGLEELSAANLFLLRLAQTGDQQLFNQLFADLVMQPKLRMCM LQILHGEADPKLANALLKLQQTTKS >Mature_345_residues MDQIYTLTQLIQQSDCEYTIYDLGRRVQPISNKQFESIEAGQQPYPYPLQRHAHLAIAYWNDTKQPWIWFLKLPLDERSL LQQADIGNFIKYVIEAIGVSLSGDLSEEQQQKLSNNPYTFKPKDDKMAMFHSLLRAELAQPMSQYYEHAKTYLSGTNGWD NWQFVGMQGLADVCANLNKDNNSTALRKALSHLPTTVLYATLGCLEHINLPEKLAQKQLETIQDLCNDKESDLFLLSAHI RALSGADKNTLIKALTLILASERLSHPEVLVAIAGRCWSGLEELSAANLFLLRLAQTGDQQLFNQLFADLVMQPKLRMCM LQILHGEADPKLANALLKLQQTTKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39092; Mature: 39092
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQIYTLTQLIQQSDCEYTIYDLGRRVQPISNKQFESIEAGQQPYPYPLQRHAHLAIAYW CCHHHHHHHHHHHCCCCEEHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEEE NDTKQPWIWFLKLPLDERSLLQQADIGNFIKYVIEAIGVSLSGDLSEEQQQKLSNNPYTF CCCCCCEEEEEECCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEE KPKDDKMAMFHSLLRAELAQPMSQYYEHAKTYLSGTNGWDNWQFVGMQGLADVCANLNKD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHCCCCC NNSTALRKALSHLPTTVLYATLGCLEHINLPEKLAQKQLETIQDLCNDKESDLFLLSAHI CCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHH RALSGADKNTLIKALTLILASERLSHPEVLVAIAGRCWSGLEELSAANLFLLRLAQTGDQ HHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH QLFNQLFADLVMQPKLRMCMLQILHGEADPKLANALLKLQQTTKS HHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MDQIYTLTQLIQQSDCEYTIYDLGRRVQPISNKQFESIEAGQQPYPYPLQRHAHLAIAYW CCHHHHHHHHHHHCCCCEEHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCEEEEEEE NDTKQPWIWFLKLPLDERSLLQQADIGNFIKYVIEAIGVSLSGDLSEEQQQKLSNNPYTF CCCCCCEEEEEECCCCHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEE KPKDDKMAMFHSLLRAELAQPMSQYYEHAKTYLSGTNGWDNWQFVGMQGLADVCANLNKD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHCCCCC NNSTALRKALSHLPTTVLYATLGCLEHINLPEKLAQKQLETIQDLCNDKESDLFLLSAHI CCHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHH RALSGADKNTLIKALTLILASERLSHPEVLVAIAGRCWSGLEELSAANLFLLRLAQTGDQ HHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH QLFNQLFADLVMQPKLRMCMLQILHGEADPKLANALLKLQQTTKS HHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA