Click here to switch to the map view.

The map label for this gene is 59711217

Identifier: 59711217

GI number: 59711217

Start: 669583

End: 669891

Strand: Reverse

Name: 59711217

Synonym: VF_0610

Alternate gene names: NA

Gene position: 669891-669583 (Counterclockwise)

Preceding gene: 59711218

Following gene: 59711209

Centisome position: 23.12

GC content: 37.54

Gene sequence:

>309_bases
ATGGATAATCTACTTGCGATATTAGCGCTAACCCTATTCTGCTTTCTTTTTTGGCAACAAAGAAGACAATCGGAATATGC
TCACCAAGCTATTCAACATTATTGTAAAAAAATGGAATTACAGCTACTTAGTGTCGCAAGAGGTTCTTACGGTATTCAAT
TACCTGACGGTAAAAAGCGCCTACACACTATTTATGAATTCGAGTTTTCTTCCGTGGGAGATGACCACTACACAGGTAAA
TTGATCATGATAGGCTTTAAAGCAGCAAAGTTTAATTTACCTCCGTATCGCATGGCTGAAGAATACTAA

Upstream 100 bases:

>100_bases
GAAACTTCGTATGTGCATGCTTCAGATCCTTCATGGAGAAGCGGATCCTAAACTGGCTAACGCTTTATTAAAATTGCAGC
AAACCACCAAGAGCTAAGAT

Downstream 100 bases:

>100_bases
TGAAAACTGGGCTAGCACATAGTATTGCTGCTAGCCCAATTCCCCCCTTATTTTATATCCTTTTGGTTACCACCATGCTT
CCCACATAGCACCAACGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MDNLLAILALTLFCFLFWQQRRQSEYAHQAIQHYCKKMELQLLSVARGSYGIQLPDGKKRLHTIYEFEFSSVGDDHYTGK
LIMIGFKAAKFNLPPYRMAEEY

Sequences:

>Translated_102_residues
MDNLLAILALTLFCFLFWQQRRQSEYAHQAIQHYCKKMELQLLSVARGSYGIQLPDGKKRLHTIYEFEFSSVGDDHYTGK
LIMIGFKAAKFNLPPYRMAEEY
>Mature_102_residues
MDNLLAILALTLFCFLFWQQRRQSEYAHQAIQHYCKKMELQLLSVARGSYGIQLPDGKKRLHTIYEFEFSSVGDDHYTGK
LIMIGFKAAKFNLPPYRMAEEY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11984; Mature: 11984

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNLLAILALTLFCFLFWQQRRQSEYAHQAIQHYCKKMELQLLSVARGSYGIQLPDGKKR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHH
LHTIYEFEFSSVGDDHYTGKLIMIGFKAAKFNLPPYRMAEEY
HHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MDNLLAILALTLFCFLFWQQRRQSEYAHQAIQHYCKKMELQLLSVARGSYGIQLPDGKKR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHH
LHTIYEFEFSSVGDDHYTGKLIMIGFKAAKFNLPPYRMAEEY
HHHHHHHHCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA