| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711176
Identifier: 59711176
GI number: 59711176
Start: 623104
End: 624411
Strand: Reverse
Name: 59711176
Synonym: VF_0569
Alternate gene names: NA
Gene position: 624411-623104 (Counterclockwise)
Preceding gene: 59711177
Following gene: 59711175
Centisome position: 21.55
GC content: 34.02
Gene sequence:
>1308_bases ATGAAGACAAAGAGTGAAAAAGGTGCAGTTGTTCTAATAATGACATCACTACTAATCCTCGCCGCTTTAATTTTATCTTT GGGTACATATAAAAGTACTTTTTATCAAATCAAAAGAGCGCAAAACGAAGTATTAGCAAAACAAGGGCACTGGAGAGCTG AGGGTGCAATCGAATGCTTATTATCTAACTTAATAACAAAAAACATCTCTCCAATACTAACAAGTACTCCAAGCGAATGT GATATTTATGCTCAACCCATTGAGTCATTTAAGGTCGAGCTAAATGATAAAATATATACAGCAGAAACCACGTCATCAAA CCAAACTATACAAAAGTCATTTATAGCAAATAGTTCAATAGGTAATGGAAGCATTCAAACTGTTGGTGATTTAAAGTTTA TAGGAACTGTTGCTATTAGACCTGATGCATTAAATGAAAAAGTGAGTGGTAATAATTATAAATGCGTAAGCGTTGCTTTT TCTAATAGCATCACTTTCAAGCATAATTCTACACATGGTTCATCTTCCCGCACAAACGGATTAGAAGTAAGTGACCCTAT GCCTAATGGACCATTTGATGGGTTCAATGGTAATTGCCATAGTGATTATAAGACAATTATATCCAAAACAACGAATGGTT CTGACACCATAGAAACAATTAATGCTCATGATATTCTTCCAGGAGAGAGTAACCCATTACCATTTAAAAATGATTTCGTT CCTGATCTTAATTTAGATCCTTTTTATAACCTTTTCAATTTACCAAAAAATACAGAAAATATTCTCAAGGTATCTCAAAA CACAGAAGAGTTTGTTTATAAAAAAATAACCTCAGCGACCAGTTGCTCACAAGAAATAAATAATCATTTTACAGGCACAA ATAAGAATAAAGGGTTATGGCTACATGGCCACTGCTATATCAATAGCCCTCTAGATTTACAGTCAAATGATTCACAAATA CTTGTTATACAAGATGGGGCCTTTGCCTTATTTGGCGCGATGAATTTTAAAGGCACAACATATCATATTGTTGATATGTC AAATTCAATAGTTGCTAACAATATAAGTAATTATTGGAATAAATCACATGGTAGCACTGCAAGTTCAGCTCTTTCAGAGT TTGTAGAACCTACAACCACTAGCATCATGTTTTACTCTTCAGCACCAAAAGGTGGTGTTATTTATGATGTTAGTGGAGGT ATTAGTACTATTGTTGGTGATATCTCTCTTGAATTCCATGCAGAAAGTAATCCCTACTTCCAAGATGGAAAGTACCAATG GAAAAAAGGATCTTGGAATGATCTCTAG
Upstream 100 bases:
>100_bases TGTCATCCATTATAGATGTTCGACTTGACGCAAAATTAGTGAATATACCAACAATGACAAAAAGTTTGAGTTTCAGAGCA AAACAAAGGAACTGGCAATA
Downstream 100 bases:
>100_bases ACAAAAAGGATTTAATCTTCTTGAAATAATGATTTCATTTACCATCATTGGTATTGGTGCTCTGGGGCTATTAAAGTTAC AAACTTTTATCGAACTTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MKTKSEKGAVVLIMTSLLILAALILSLGTYKSTFYQIKRAQNEVLAKQGHWRAEGAIECLLSNLITKNISPILTSTPSEC DIYAQPIESFKVELNDKIYTAETTSSNQTIQKSFIANSSIGNGSIQTVGDLKFIGTVAIRPDALNEKVSGNNYKCVSVAF SNSITFKHNSTHGSSSRTNGLEVSDPMPNGPFDGFNGNCHSDYKTIISKTTNGSDTIETINAHDILPGESNPLPFKNDFV PDLNLDPFYNLFNLPKNTENILKVSQNTEEFVYKKITSATSCSQEINNHFTGTNKNKGLWLHGHCYINSPLDLQSNDSQI LVIQDGAFALFGAMNFKGTTYHIVDMSNSIVANNISNYWNKSHGSTASSALSEFVEPTTTSIMFYSSAPKGGVIYDVSGG ISTIVGDISLEFHAESNPYFQDGKYQWKKGSWNDL
Sequences:
>Translated_435_residues MKTKSEKGAVVLIMTSLLILAALILSLGTYKSTFYQIKRAQNEVLAKQGHWRAEGAIECLLSNLITKNISPILTSTPSEC DIYAQPIESFKVELNDKIYTAETTSSNQTIQKSFIANSSIGNGSIQTVGDLKFIGTVAIRPDALNEKVSGNNYKCVSVAF SNSITFKHNSTHGSSSRTNGLEVSDPMPNGPFDGFNGNCHSDYKTIISKTTNGSDTIETINAHDILPGESNPLPFKNDFV PDLNLDPFYNLFNLPKNTENILKVSQNTEEFVYKKITSATSCSQEINNHFTGTNKNKGLWLHGHCYINSPLDLQSNDSQI LVIQDGAFALFGAMNFKGTTYHIVDMSNSIVANNISNYWNKSHGSTASSALSEFVEPTTTSIMFYSSAPKGGVIYDVSGG ISTIVGDISLEFHAESNPYFQDGKYQWKKGSWNDL >Mature_435_residues MKTKSEKGAVVLIMTSLLILAALILSLGTYKSTFYQIKRAQNEVLAKQGHWRAEGAIECLLSNLITKNISPILTSTPSEC DIYAQPIESFKVELNDKIYTAETTSSNQTIQKSFIANSSIGNGSIQTVGDLKFIGTVAIRPDALNEKVSGNNYKCVSVAF SNSITFKHNSTHGSSSRTNGLEVSDPMPNGPFDGFNGNCHSDYKTIISKTTNGSDTIETINAHDILPGESNPLPFKNDFV PDLNLDPFYNLFNLPKNTENILKVSQNTEEFVYKKITSATSCSQEINNHFTGTNKNKGLWLHGHCYINSPLDLQSNDSQI LVIQDGAFALFGAMNFKGTTYHIVDMSNSIVANNISNYWNKSHGSTASSALSEFVEPTTTSIMFYSSAPKGGVIYDVSGG ISTIVGDISLEFHAESNPYFQDGKYQWKKGSWNDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47653; Mature: 47653
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTKSEKGAVVLIMTSLLILAALILSLGTYKSTFYQIKRAQNEVLAKQGHWRAEGAIECL CCCCCCCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LSNLITKNISPILTSTPSECDIYAQPIESFKVELNDKIYTAETTSSNQTIQKSFIANSSI HHHHHHCCCCHHCCCCCCCCEEEECCCCCEEEEECCEEEEEECCCCCHHHHHHHHCCCCC GNGSIQTVGDLKFIGTVAIRPDALNEKVSGNNYKCVSVAFSNSITFKHNSTHGSSSRTNG CCCCEEEECCEEEEEEEEECCCCCCCCCCCCCEEEEEEEECCEEEEEECCCCCCCCCCCC LEVSDPMPNGPFDGFNGNCHSDYKTIISKTTNGSDTIETINAHDILPGESNPLPFKNDFV EEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC PDLNLDPFYNLFNLPKNTENILKVSQNTEEFVYKKITSATSCSQEINNHFTGTNKNKGLW CCCCCCCCHHHHCCCCCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE LHGHCYINSPLDLQSNDSQILVIQDGAFALFGAMNFKGTTYHIVDMSNSIVANNISNYWN EEEEEEECCCCCCCCCCCEEEEEECCCEEEEEEECCCCCEEEEEECCCCEEHHCHHHHHC KSHGSTASSALSEFVEPTTTSIMFYSSAPKGGVIYDVSGGISTIVGDISLEFHAESNPYF CCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCEEEECCCCCEEEEEEEEEEEEECCCCCE QDGKYQWKKGSWNDL ECCEEEECCCCCCCC >Mature Secondary Structure MKTKSEKGAVVLIMTSLLILAALILSLGTYKSTFYQIKRAQNEVLAKQGHWRAEGAIECL CCCCCCCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH LSNLITKNISPILTSTPSECDIYAQPIESFKVELNDKIYTAETTSSNQTIQKSFIANSSI HHHHHHCCCCHHCCCCCCCCEEEECCCCCEEEEECCEEEEEECCCCCHHHHHHHHCCCCC GNGSIQTVGDLKFIGTVAIRPDALNEKVSGNNYKCVSVAFSNSITFKHNSTHGSSSRTNG CCCCEEEECCEEEEEEEEECCCCCCCCCCCCCEEEEEEEECCEEEEEECCCCCCCCCCCC LEVSDPMPNGPFDGFNGNCHSDYKTIISKTTNGSDTIETINAHDILPGESNPLPFKNDFV EEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC PDLNLDPFYNLFNLPKNTENILKVSQNTEEFVYKKITSATSCSQEINNHFTGTNKNKGLW CCCCCCCCHHHHCCCCCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEE LHGHCYINSPLDLQSNDSQILVIQDGAFALFGAMNFKGTTYHIVDMSNSIVANNISNYWN EEEEEEECCCCCCCCCCCEEEEEECCCEEEEEEECCCCCEEEEEECCCCEEHHCHHHHHC KSHGSTASSALSEFVEPTTTSIMFYSSAPKGGVIYDVSGGISTIVGDISLEFHAESNPYF CCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCEEEECCCCCEEEEEEEEEEEEECCCCCE QDGKYQWKKGSWNDL ECCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA